BLASTX nr result
ID: Panax21_contig00011977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00011977
(611 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316034.1| GRAS family transcription factor [Populus tr... 86 2e-30
ref|XP_002316032.1| GRAS family transcription factor [Populus tr... 87 3e-30
ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus commun... 83 9e-30
ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus commun... 81 9e-30
ref|XP_002519214.1| DELLA protein RGL2, putative [Ricinus commun... 78 6e-29
>ref|XP_002316034.1| GRAS family transcription factor [Populus trichocarpa]
gi|222865074|gb|EEF02205.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 588
Score = 85.5 bits (210), Expect(2) = 2e-30
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 4/91 (4%)
Frame = -1
Query: 611 YYFSEALRHRIEQQTGRRTLKDLRKMQSL----ALMDPSPNTLAFYQ*VPFSQVSLFTAM 444
+YFSEALR RI+++TGR T K K S A+M +P LA YQ VPFSQV+ F +
Sbjct: 250 HYFSEALRERIDRETGRITPKWPEKSHSFDLDRAMMTLNPAILACYQNVPFSQVAHFAGI 309
Query: 443 QAIIENVSETKKIHIIDIEKRCGLQFLVLME 351
QAI+E V+ K+IHIID+E R G+Q+ VLM+
Sbjct: 310 QAIVEKVNRAKRIHIIDLEIRNGVQWTVLMQ 340
Score = 72.4 bits (176), Expect(2) = 2e-30
Identities = 37/70 (52%), Positives = 52/70 (74%)
Frame = -3
Query: 351 SLAGRSEYPVEHLKITAIGTKSKHKIKETGKKLMSVAHSLNLSFSFNVVMVADMLDLNET 172
+L + E P+E LKI+AIG+ SK I++TGK+LMS A ++N+ FSF VVMV+DMLDL +
Sbjct: 341 ALVSQHESPLELLKISAIGSTSKELIEDTGKRLMSFAETMNIPFSFKVVMVSDMLDLKKD 400
Query: 171 LSELNSNCSV 142
L EL + +V
Sbjct: 401 LFELGAEEAV 410
>ref|XP_002316032.1| GRAS family transcription factor [Populus trichocarpa]
gi|222865072|gb|EEF02203.1| GRAS family transcription
factor [Populus trichocarpa]
Length = 549
Score = 87.0 bits (214), Expect(2) = 3e-30
Identities = 45/87 (51%), Positives = 60/87 (68%)
Frame = -1
Query: 611 YYFSEALRHRIEQQTGRRTLKDLRKMQSLALMDPSPNTLAFYQ*VPFSQVSLFTAMQAII 432
YYFS ALR RI Q+T R T K+ A+M PS + +AFY+ PF+QVS F +QAI+
Sbjct: 222 YYFSRALRERINQETRRSTSKEQSFNIYEAIMTPSLSNMAFYKQNPFNQVSHFAGIQAIV 281
Query: 431 ENVSETKKIHIIDIEKRCGLQFLVLME 351
EN E+K+IHIID+E R GLQ+ + M+
Sbjct: 282 ENTIESKRIHIIDLEIRSGLQWTIFMQ 308
Score = 70.5 bits (171), Expect(2) = 3e-30
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = -3
Query: 360 FDGSLAGRSEYPVEHLKITAIGTKSKHKIKETGKKLMSVAHSLNLSFSFNVVMVADMLDL 181
F +L + +P+E LKITAIGT SK I++TGK+L+S A ++NL SFNVVMV+D+LDL
Sbjct: 306 FMQALVSQEAWPLELLKITAIGTTSKQLIEDTGKRLLSFAQTMNLPCSFNVVMVSDILDL 365
Query: 180 NETLSELNSNCSV 142
E +L+ +V
Sbjct: 366 REDHFQLDDEETV 378
>ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis]
gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative
[Ricinus communis]
Length = 594
Score = 83.2 bits (204), Expect(2) = 9e-30
Identities = 42/91 (46%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Frame = -1
Query: 611 YYFSEALRHRIEQQTGRRTLKDLRKMQSL----ALMDPSPNTLAFYQ*VPFSQVSLFTAM 444
YYF+EAL RI+ +TG+ K+L K Q+ A+M P+P LA + PF QV+ F +
Sbjct: 253 YYFAEALHDRIDIETGKTKSKELGKKQAFEIDEAMMTPNPTILASHLETPFCQVAHFAGI 312
Query: 443 QAIIENVSETKKIHIIDIEKRCGLQFLVLME 351
QAI++NV++ KKIHI+D+ R G+Q+ VLM+
Sbjct: 313 QAIVDNVADAKKIHILDLSLRYGMQWTVLMQ 343
Score = 72.8 bits (177), Expect(2) = 9e-30
Identities = 34/70 (48%), Positives = 52/70 (74%)
Frame = -3
Query: 351 SLAGRSEYPVEHLKITAIGTKSKHKIKETGKKLMSVAHSLNLSFSFNVVMVADMLDLNET 172
+L R + P+EHLKITAIGT S+ I+ TGK+L+S A ++N++FSF + +V+D+LDL E
Sbjct: 344 ALVSRCDCPLEHLKITAIGTTSRELIENTGKRLISFAETMNIAFSFKMALVSDLLDLKED 403
Query: 171 LSELNSNCSV 142
L +L+ +V
Sbjct: 404 LLDLDDGETV 413
>ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus communis]
gi|223541528|gb|EEF43077.1| DELLA protein RGL1, putative
[Ricinus communis]
Length = 562
Score = 81.3 bits (199), Expect(2) = 9e-30
Identities = 46/90 (51%), Positives = 67/90 (74%), Gaps = 3/90 (3%)
Frame = -1
Query: 611 YYFSEALRHRIEQQTGR-RTLKDLRKMQSLALMDPSPN--TLAFYQ*VPFSQVSLFTAMQ 441
Y+FSEAL+ RI+++TGR +++ LRK Q + DP+ N +LA +Q +PF QV+ FTA+Q
Sbjct: 235 YHFSEALKERIDRETGRFPSIEYLRKKQPV---DPNHNAASLACHQKIPFIQVARFTAIQ 291
Query: 440 AIIENVSETKKIHIIDIEKRCGLQFLVLME 351
I+ENV+ K+IHIID+E R G Q+ VLM+
Sbjct: 292 EIVENVARAKRIHIIDLEIRSGAQWPVLMQ 321
Score = 74.7 bits (182), Expect(2) = 9e-30
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = -3
Query: 351 SLAGRSEYPVEHLKITAIGTKSKHKIKETGKKLMSVAHSLNLSFSFNVVMVADMLDLNET 172
+L R P+E LKI+AIGT SKH I++TGK+L S A S+N+ FSF VMV+DMLDL +
Sbjct: 322 ALMSRHHCPLELLKISAIGTTSKHLIEDTGKRLASFAESMNVPFSFRAVMVSDMLDLKKE 381
Query: 171 LSELNSNCSV 142
L EL+S +V
Sbjct: 382 LFELDSEEAV 391
>ref|XP_002519214.1| DELLA protein RGL2, putative [Ricinus communis]
gi|223541529|gb|EEF43078.1| DELLA protein RGL2, putative
[Ricinus communis]
Length = 576
Score = 78.2 bits (191), Expect(2) = 6e-29
Identities = 41/87 (47%), Positives = 59/87 (67%)
Frame = -1
Query: 611 YYFSEALRHRIEQQTGRRTLKDLRKMQSLALMDPSPNTLAFYQ*VPFSQVSLFTAMQAII 432
+YF +ALR RI+++TG+ K A+M PS LA YQ VPFSQV+ F +QAI+
Sbjct: 250 HYFCKALRERIDRETGKSLGKQHCFNIDEAIMAPSSTILASYQEVPFSQVAHFAGIQAIV 309
Query: 431 ENVSETKKIHIIDIEKRCGLQFLVLME 351
ENV++ K+IH+ID+ R G+Q+ LM+
Sbjct: 310 ENVTDAKRIHVIDLGIRVGVQWTGLMQ 336
Score = 75.1 bits (183), Expect(2) = 6e-29
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = -3
Query: 324 VEHLKITAIGTKSKHKIKETGKKLMSVAHSLNLSFSFNVVMVADMLDLNETLSELNSNCS 145
+E LKITA+GT SKH IK+TGK+L S A S++L F+FN+VMV+DMLDL E EL+S+ +
Sbjct: 346 LELLKITAVGTTSKHLIKDTGKRLTSFAESISLPFAFNIVMVSDMLDLTEDQFELDSDQT 405
Query: 144 VFQDC 130
V C
Sbjct: 406 VVVYC 410