BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011974
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putativ...   118   6e-25
ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent...   109   2e-22
ref|XP_002315356.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent...    97   1e-18
ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicag...    86   3e-15

>ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223529548|gb|EEF31501.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 493

 Score =  118 bits (295), Expect = 6e-25
 Identities = 64/137 (46%), Positives = 87/137 (63%)
 Frame = +1

Query: 22  LDQLCTNELNLRPIKLLFIVGDGSNSQELVAAIKSKGYPISTIGTDGETKSSSETGFAVF 201
           L +LC++ L     KLLFIV +   +  LV  +KS GY +ST      +   +     V 
Sbjct: 352 LSKLCSHRL-----KLLFIVENNKKAASLVKILKSNGYSVSTESNCEVSNVDTRMKPVVS 406

Query: 202 MMDSKYIGTADFSEFEVVLNFNFAPPIDKYIQILTRMARFTINGMLHSFLRREDALFAGP 381
           ++++++I TAD   +E+++  NF   ID YIQILTRMAR T +G+LHSF+  EDAL AGP
Sbjct: 407 VINAEHISTADLGVYEIIILPNFVLSIDNYIQILTRMARHTTHGILHSFMTEEDALLAGP 466

Query: 382 LVEILEQCRQTVPEPLR 432
           L+EILEQC Q VPE LR
Sbjct: 467 LIEILEQCGQAVPETLR 483


>ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
           [Cucumis sativus] gi|449517699|ref|XP_004165882.1|
           PREDICTED: pre-mRNA-processing ATP-dependent RNA
           helicase prp5-like [Cucumis sativus]
          Length = 562

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/152 (40%), Positives = 90/152 (59%), Gaps = 6/152 (3%)
 Frame = +1

Query: 1   LAKGLQVLDQLCTNELNLRPIKLLFIVGDGSNSQELVAAIKSKGYPISTIGTDG------ 162
           L+K +Q LD+   +++  +P+K+LFI+G   N  +L AA+K KG+ I      G      
Sbjct: 402 LSKVIQALDRANGSQIRPQPLKMLFILGKECNVHDLAAALKFKGHDIVAGALCGVPEIKN 461

Query: 163 ETKSSSETGFAVFMMDSKYIGTADFSEFEVVLNFNFAPPIDKYIQILTRMARFTINGMLH 342
             K   +    V   D + I T D   +E +   +  PPIDKY++ILT MAR T NG+LH
Sbjct: 462 NLKVDGKLRPVVAKTDIEQINTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLH 521

Query: 343 SFLRREDALFAGPLVEILEQCRQTVPEPLRHI 438
           SF+ +E+A  AG LVEILEQC Q VP+ +R++
Sbjct: 522 SFISKEEASVAGSLVEILEQCGQDVPKTVRNL 553


>ref|XP_002315356.1| predicted protein [Populus trichocarpa] gi|222864396|gb|EEF01527.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  100 bits (250), Expect = 9e-20
 Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
 Frame = +1

Query: 28  QLCTNE-LNLRPIKLLFIVGDGSNSQELVAAIKSKGYPISTIGTDGETKSSSETGFAVFM 204
           ++CT++ L+   + +L++VG+ ++S  LV  ++  GY +S       +   +     V +
Sbjct: 345 KVCTSQYLDNCFLLVLYVVGNDNSSFNLVKMLEINGYTVSVESNRSISNDDNRMKPVVSV 404

Query: 205 MDSKYIGTADFSEFEVVLNFNFAPPIDKYIQILTRMARFTINGMLHSFLRREDALFAGPL 384
           ++ + I T + + +E V+  NF P ID Y+QILTRMAR +I G  HSFL +EDAL A PL
Sbjct: 405 INVERISTTNLAFYETVILPNFGPSIDNYVQILTRMARHSIKGNFHSFLTKEDALIARPL 464

Query: 385 VEILEQCRQTVPEPLRHI 438
           + ILEQC Q VPE LR++
Sbjct: 465 MGILEQCGQAVPEALRNL 482


>ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
           [Glycine max]
          Length = 563

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/145 (37%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
 Frame = +1

Query: 13  LQVLDQLCTNELNLRPIKLLFIVGDGSNSQELVAAIKSKGYPISTIGTDGET---KSSSE 183
           ++ LDQ  +N  + +   +L+I+       +LV  +KSKGY +S + +D      +  S+
Sbjct: 413 IEALDQFQSN--STQNSNMLYILSKDVKCHKLVKTLKSKGYSVS-LDSDAANINDRVDSD 469

Query: 184 TGFAVFMMDSKYIGTADFSEFEVVLNFNFAPPIDKYIQILTRMARFTINGMLHSFLRRED 363
              AV ++D   I T D   ++VV+  +F P ID Y+ ILT+MAR ++NG+LHSFL + D
Sbjct: 470 RRAAVSLIDLVQISTTDIGTYDVVVLPSFVPSIDTYVHILTKMARTSVNGVLHSFLTKRD 529

Query: 364 ALFAGPLVEILEQCRQTVPEPLRHI 438
              A PL+ +LEQC Q VP+ L+ +
Sbjct: 530 TELAAPLIAVLEQCGQEVPQTLQDL 554


>ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355479310|gb|AES60513.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 532

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
 Frame = +1

Query: 1   LAKGLQVLDQLCTNELNLRPIKLLFIVGDGSNSQELVAAIKSKGYPISTIGTDGETKSSS 180
           L K ++VL Q  +++ +     LL+I+       +LV  +KS G   S + +D  T + S
Sbjct: 376 LVKSIEVLRQFRSSQTHSS--NLLYILRKDVKCHKLVKTLKSMGCSTS-LDSDAATINDS 432

Query: 181 --ETGFAVFMMDSKYIGTADFSEFEVVLNFNFAPPIDKYIQILTRMARFTINGMLHSFLR 354
                  V M+D + I T D   ++V++  +  P +D Y  ILT MAR ++NG+LH FL 
Sbjct: 433 VDSNRRLVTMIDLEDISTLDIGMYDVIVLPSLVPSMDTYEHILTNMARQSVNGILHGFLT 492

Query: 355 REDALFAGPLVEILEQCRQTVPEPLRHI 438
           + D   AGPL+ ILEQC Q VPE L+ +
Sbjct: 493 KSDTEHAGPLISILEQCGQEVPETLKDL 520