BLASTX nr result

ID: Panax21_contig00011961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011961
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ06364.1| alpha-tubulin [Alopecurus aequalis]                   283   1e-74
ref|XP_003558668.1| PREDICTED: tubulin alpha chain-like [Brachyp...   283   1e-74
gb|ABD92937.1| alpha tubulin-4A [Triticum aestivum] gi|90289612|...   283   1e-74
gb|ABD92936.1| alpha tubulin-4D [Triticum aestivum]                   283   1e-74
gb|AEQ75493.1| alpha-tubulin [Rosa multiflora]                        281   4e-74

>dbj|BAJ06364.1| alpha-tubulin [Alopecurus aequalis]
          Length = 451

 Score =  283 bits (723), Expect = 1e-74
 Identities = 144/162 (88%), Positives = 145/162 (89%)
 Frame = +2

Query: 2   EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXX 181
           EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV               
Sbjct: 97  EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156

Query: 182 XXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRS 361
             VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVS+LLDNEAIYDICRRS
Sbjct: 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRS 216

Query: 362 LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN 487
           LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN
Sbjct: 217 LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN 258


>ref|XP_003558668.1| PREDICTED: tubulin alpha chain-like [Brachypodium distachyon]
           gi|146760203|emb|CAM58977.1| alpha-tubulin 4 [Hordeum
           vulgare subsp. vulgare]
          Length = 451

 Score =  283 bits (723), Expect = 1e-74
 Identities = 144/162 (88%), Positives = 145/162 (89%)
 Frame = +2

Query: 2   EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXX 181
           EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV               
Sbjct: 97  EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156

Query: 182 XXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRS 361
             VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVS+LLDNEAIYDICRRS
Sbjct: 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRS 216

Query: 362 LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN 487
           LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN
Sbjct: 217 LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN 258


>gb|ABD92937.1| alpha tubulin-4A [Triticum aestivum] gi|90289612|gb|ABD92938.1|
           alpha tubulin-4B [Triticum aestivum]
          Length = 451

 Score =  283 bits (723), Expect = 1e-74
 Identities = 144/162 (88%), Positives = 145/162 (89%)
 Frame = +2

Query: 2   EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXX 181
           EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV               
Sbjct: 97  EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156

Query: 182 XXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRS 361
             VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVS+LLDNEAIYDICRRS
Sbjct: 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRS 216

Query: 362 LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN 487
           LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN
Sbjct: 217 LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN 258


>gb|ABD92936.1| alpha tubulin-4D [Triticum aestivum]
          Length = 451

 Score =  283 bits (723), Expect = 1e-74
 Identities = 144/162 (88%), Positives = 145/162 (89%)
 Frame = +2

Query: 2   EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXX 181
           EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV               
Sbjct: 97  EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 156

Query: 182 XXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRS 361
             VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVS+LLDNEAIYDICRRS
Sbjct: 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRS 216

Query: 362 LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN 487
           LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN
Sbjct: 217 LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN 258


>gb|AEQ75493.1| alpha-tubulin [Rosa multiflora]
          Length = 440

 Score =  281 bits (719), Expect = 4e-74
 Identities = 144/162 (88%), Positives = 144/162 (88%)
 Frame = +2

Query: 2   EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXX 181
           EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV               
Sbjct: 86  EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 145

Query: 182 XXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRS 361
             VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRS
Sbjct: 146 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRS 205

Query: 362 LDIERPTYTNLNRLVSQVISSLTTSLRFDGALNVDVTEFQTN 487
           LDIERPTYTNLNRLVSQVISSLT SLRFDGALNVDVTEFQTN
Sbjct: 206 LDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 247


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