BLASTX nr result

ID: Panax21_contig00011958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011958
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76534.1| hypothetical protein VITISV_006083 [Vitis vinifera]   154   9e-36
ref|XP_002329605.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
gb|ABK95062.1| unknown [Populus trichocarpa]                          139   3e-31
ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002531215.1| GATA transcription factor, putative [Ricinus...   135   3e-30

>emb|CAN76534.1| hypothetical protein VITISV_006083 [Vitis vinifera]
          Length = 542

 Score =  154 bits (388), Expect = 9e-36
 Identities = 80/132 (60%), Positives = 96/132 (72%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   EIGHGSVLIRHPXXXXXXXXXXXXXXXVDNKPHRVNEAYSRLTSLPVHTFNKGVNFSCPG 182
           EIGHGSVLIRHP               VDNK + VNE YSR+ +LPV+T NKG+NF  PG
Sbjct: 204 EIGHGSVLIRHPSAIGREEESEASSLSVDNKSYLVNEVYSRIGALPVNTNNKGINFPSPG 263

Query: 183 IERMKKP---GQEMEQHFKREKAQQEKIQILGNHNSPLCNIELKDVLNFEEFGRHITNDE 353
           +E+MKKP   G + EQ  KR+K+Q EK+QIL NHNSPL +I+LKDV+NFEEF  H+TN+E
Sbjct: 264 LEKMKKPAGLGMQQEQT-KRDKSQHEKLQILANHNSPLRSIDLKDVVNFEEFVGHLTNEE 322

Query: 354 QQQLLKYLPSID 389
           Q QLLKYLPS D
Sbjct: 323 QLQLLKYLPSED 334


>ref|XP_002329605.1| predicted protein [Populus trichocarpa] gi|222870314|gb|EEF07445.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/131 (55%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
 Frame = +3

Query: 3   EIGHGSVLIRHPXXXXXXXXXXXXXXXVDNKPHRVNEAYSRLTSLPVHTFNKGVNFSCPG 182
           EIGHGSVLIRHP               V+NK +  NEAYS    LPVH  NK VN + P 
Sbjct: 196 EIGHGSVLIRHPSSIARDEESEASSLSVENKQYLTNEAYSHPVILPVHNENKSVNTTYPI 255

Query: 183 IERMKK-PGQEMEQH-FKREKAQQEKIQILGNHNSPLCNIELKDVLNFEEFGRHITNDEQ 356
            E  K   GQ M+Q   KR+K   EK+ ILG+HNSPLC+I+L D+LNFEEF RH+TN+EQ
Sbjct: 256 TETTKNLTGQGMQQEQLKRDKFPHEKVHILGSHNSPLCSIDLNDILNFEEFARHLTNEEQ 315

Query: 357 QQLLKYLPSID 389
           QQLLKYLP +D
Sbjct: 316 QQLLKYLPPLD 326


>gb|ABK95062.1| unknown [Populus trichocarpa]
          Length = 540

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/131 (55%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
 Frame = +3

Query: 3   EIGHGSVLIRHPXXXXXXXXXXXXXXXVDNKPHRVNEAYSRLTSLPVHTFNKGVNFSCPG 182
           EIGHGSVLIRHP               V+NK +  NEAYS    LPVH  NK VN + P 
Sbjct: 200 EIGHGSVLIRHPSSIARDEESEASSLSVENKQYLTNEAYSHPVILPVHNENKSVNTTYPI 259

Query: 183 IERMKK-PGQEMEQH-FKREKAQQEKIQILGNHNSPLCNIELKDVLNFEEFGRHITNDEQ 356
            E  K   GQ M+Q   KR+K   EK+ ILG+HNSPLC+I+L D+LNFEEF RH+TN+EQ
Sbjct: 260 TETTKNLTGQGMQQEQLKRDKFPHEKVHILGSHNSPLCSIDLNDILNFEEFARHLTNEEQ 319

Query: 357 QQLLKYLPSID 389
           QQLLKYLP +D
Sbjct: 320 QQLLKYLPPLD 330


>ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|222833801|gb|EEE72278.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/131 (52%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
 Frame = +3

Query: 3   EIGHGSVLIRHPXXXXXXXXXXXXXXXVDNKPHRVNEAYSRLTSLPVHTFNKGVNFSCPG 182
           EIGHGSVLIRHP               V+NK +  NEAYS    LPVH  N+ VN + P 
Sbjct: 204 EIGHGSVLIRHPSSIARDEESEASSLSVENKQYSTNEAYSHPVILPVHNENQSVNMTYPV 263

Query: 183 IERMKK-PGQEMEQH-FKREKAQQEKIQILGNHNSPLCNIELKDVLNFEEFGRHITNDEQ 356
             + K   GQ M+Q    R+K+  EK+ ILG+HNSPLC+++L D+LNFEEF RH+TN+EQ
Sbjct: 264 TVKTKNLSGQGMQQEQLNRDKSPHEKVHILGSHNSPLCSVDLNDILNFEEFARHLTNEEQ 323

Query: 357 QQLLKYLPSID 389
           QQLLKYLP +D
Sbjct: 324 QQLLKYLPPLD 334


>ref|XP_002531215.1| GATA transcription factor, putative [Ricinus communis]
           gi|223529175|gb|EEF31151.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 542

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/131 (52%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
 Frame = +3

Query: 3   EIGHGSVLIRHPXXXXXXXXXXXXXXXVDNKPHRVNEAYSRLTSLPVHTFNKGVNFSCPG 182
           EIGHGSVLIRHP               V+NK    NEAYS    L VH  NK ++     
Sbjct: 204 EIGHGSVLIRHPSSIARDEESEASSLSVENKQCSTNEAYSHSLGLLVHIGNKNIHTPSLL 263

Query: 183 IERMKKP-GQEME-QHFKREKAQQEKIQILGNHNSPLCNIELKDVLNFEEFGRHITNDEQ 356
           IE+ K P GQ ++ +  KR+K Q E++Q+LGNHNSPLCN++L D+LNFEEF R++TN+EQ
Sbjct: 264 IEKAKNPIGQGLQHEQLKRDKFQHERVQVLGNHNSPLCNVDLNDILNFEEFARYLTNEEQ 323

Query: 357 QQLLKYLPSID 389
           QQLLKYLP +D
Sbjct: 324 QQLLKYLPPVD 334


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