BLASTX nr result

ID: Panax21_contig00011893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011893
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38274.3| unnamed protein product [Vitis vinifera]              239   3e-61
emb|CAN64339.1| hypothetical protein VITISV_031562 [Vitis vinifera]   239   3e-61
ref|XP_003552088.1| PREDICTED: geminivirus Rep-interacting motor...   234   8e-60
ref|XP_002267210.2| PREDICTED: geminivirus Rep-interacting motor...   233   1e-59
ref|XP_003531982.1| PREDICTED: geminivirus Rep-interacting motor...   227   8e-58

>emb|CBI38274.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  239 bits (609), Expect = 3e-61
 Identities = 123/180 (68%), Positives = 146/180 (81%)
 Frame = -1

Query: 542  NDQCVLLFNEVQKAWKVSFTLQSDLKSDNIMLVEKHKLEKDQNDQLRNQVAQLLQMEQDQ 363
            NDQCVLLFNEVQKAWKVSFTLQSDLKS+N ML +KH++EK+QN QLRNQVAQLLQ+EQDQ
Sbjct: 501  NDQCVLLFNEVQKAWKVSFTLQSDLKSENNMLADKHRIEKEQNSQLRNQVAQLLQLEQDQ 560

Query: 362  KLQIQQRDSTIENLQAKLKTIESQLNDALLSKEARAAVGTESKTVAQSTSNSTGEDVDSV 183
            K+QIQQRDSTI+ LQ+++K IE +L +A+ SKEA++  G ES     S   STG+ +DS 
Sbjct: 561  KMQIQQRDSTIQTLQSEIKAIELKLMEAINSKEAKSVFGAESGPEVLSIPKSTGDVMDSS 620

Query: 182  SVTKKLEEELLKRDALIERLHEENEKLFERLTEKATSAGSTQVSSPSPKLLTNIQTGNLG 3
            +VTKKLEEELLKRDALIERLHEENEKLF+RLTEKA S G  Q+SS   K L N+    +G
Sbjct: 621  AVTKKLEEELLKRDALIERLHEENEKLFDRLTEKAASTGPPQMSSSPSKGLMNVHAREMG 680


>emb|CAN64339.1| hypothetical protein VITISV_031562 [Vitis vinifera]
          Length = 1739

 Score =  239 bits (609), Expect = 3e-61
 Identities = 123/180 (68%), Positives = 146/180 (81%)
 Frame = -1

Query: 542  NDQCVLLFNEVQKAWKVSFTLQSDLKSDNIMLVEKHKLEKDQNDQLRNQVAQLLQMEQDQ 363
            NDQCVLLFNEVQKAWKVSFTLQSDLKS+N ML +KH++EK+QN QLRNQVAQLLQ+EQDQ
Sbjct: 1477 NDQCVLLFNEVQKAWKVSFTLQSDLKSENNMLADKHRIEKEQNSQLRNQVAQLLQLEQDQ 1536

Query: 362  KLQIQQRDSTIENLQAKLKTIESQLNDALLSKEARAAVGTESKTVAQSTSNSTGEDVDSV 183
            K+QIQQRDSTI+ LQ+++K IE +L +A+ SKEA++  G ES     S   STG+ +DS 
Sbjct: 1537 KMQIQQRDSTIQTLQSEIKAIELKLMEAINSKEAKSVFGAESGPEVLSIPKSTGDVMDSS 1596

Query: 182  SVTKKLEEELLKRDALIERLHEENEKLFERLTEKATSAGSTQVSSPSPKLLTNIQTGNLG 3
            +VTKKLEEELLKRDALIERLHEENEKLF+RLTEKA S G  Q+SS   K L N+    +G
Sbjct: 1597 AVTKKLEEELLKRDALIERLHEENEKLFDRLTEKAASTGPPQMSSSPSKGLMNVHAREMG 1656


>ref|XP_003552088.1| PREDICTED: geminivirus Rep-interacting motor protein-like [Glycine
            max]
          Length = 1283

 Score =  234 bits (596), Expect = 8e-60
 Identities = 113/180 (62%), Positives = 154/180 (85%)
 Frame = -1

Query: 542  NDQCVLLFNEVQKAWKVSFTLQSDLKSDNIMLVEKHKLEKDQNDQLRNQVAQLLQMEQDQ 363
            NDQC+LLFNEVQKAWKVS  LQ+DLKS++++L +KHK+EK+QN+QLRNQVAQLL++EQDQ
Sbjct: 507  NDQCILLFNEVQKAWKVSSVLQTDLKSEHVLLSDKHKIEKEQNNQLRNQVAQLLRLEQDQ 566

Query: 362  KLQIQQRDSTIENLQAKLKTIESQLNDALLSKEARAAVGTESKTVAQSTSNSTGEDVDSV 183
            KLQIQ++DSTI++LQAK++T+E+Q N+A+ S E+R+    E+++  QS S  TG+ +DS 
Sbjct: 567  KLQIQEQDSTIQSLQAKIRTLETQFNEAIKSSESRSTFVYETESADQSNSGPTGDGIDSS 626

Query: 182  SVTKKLEEELLKRDALIERLHEENEKLFERLTEKATSAGSTQVSSPSPKLLTNIQTGNLG 3
            +VTKKL+EEL KRDALIERLHEENEKLF+RLT+KA++AGS ++SSP  +   N+Q  ++G
Sbjct: 627  AVTKKLDEELKKRDALIERLHEENEKLFDRLTQKASTAGSPKLSSPLARGSANVQPRDIG 686


>ref|XP_002267210.2| PREDICTED: geminivirus Rep-interacting motor protein-like, partial
            [Vitis vinifera]
          Length = 1004

 Score =  233 bits (595), Expect = 1e-59
 Identities = 119/167 (71%), Positives = 141/167 (84%)
 Frame = -1

Query: 542  NDQCVLLFNEVQKAWKVSFTLQSDLKSDNIMLVEKHKLEKDQNDQLRNQVAQLLQMEQDQ 363
            NDQCVLLFNEVQKAWKVSFTLQSDLKS+N ML +KH++EK+QN QLRNQVAQLLQ+EQDQ
Sbjct: 501  NDQCVLLFNEVQKAWKVSFTLQSDLKSENNMLADKHRIEKEQNSQLRNQVAQLLQLEQDQ 560

Query: 362  KLQIQQRDSTIENLQAKLKTIESQLNDALLSKEARAAVGTESKTVAQSTSNSTGEDVDSV 183
            K+QIQQRDSTI+ LQ+++K IE +L +A+ SKEA++  G ES     S   STG+ +DS 
Sbjct: 561  KMQIQQRDSTIQTLQSEIKAIELKLMEAINSKEAKSVFGAESGPEVLSIPKSTGDVMDSS 620

Query: 182  SVTKKLEEELLKRDALIERLHEENEKLFERLTEKATSAGSTQVSSPS 42
            +VTKKLEEELLKRDALIERLHEENEKLF+RLTEKA S G  QV +P+
Sbjct: 621  AVTKKLEEELLKRDALIERLHEENEKLFDRLTEKAASTGPPQVLTPT 667


>ref|XP_003531982.1| PREDICTED: geminivirus Rep-interacting motor protein-like [Glycine
            max]
          Length = 1282

 Score =  227 bits (579), Expect = 8e-58
 Identities = 113/180 (62%), Positives = 151/180 (83%)
 Frame = -1

Query: 542  NDQCVLLFNEVQKAWKVSFTLQSDLKSDNIMLVEKHKLEKDQNDQLRNQVAQLLQMEQDQ 363
            NDQC+LLFNEVQKA KVS  LQ+DLKS++++L +KH +EK+QN+QLRNQVAQLL++EQDQ
Sbjct: 506  NDQCILLFNEVQKARKVSSVLQTDLKSEHVLLSDKHNIEKEQNNQLRNQVAQLLRLEQDQ 565

Query: 362  KLQIQQRDSTIENLQAKLKTIESQLNDALLSKEARAAVGTESKTVAQSTSNSTGEDVDSV 183
            KLQIQ++DSTI++LQAK++T+E+QLN+A+ S E+R+   +E +   QS S  TG+ +DS 
Sbjct: 566  KLQIQEQDSTIQSLQAKIRTLETQLNEAIKSSESRSTFVSEPEFADQSNSRPTGDGIDSS 625

Query: 182  SVTKKLEEELLKRDALIERLHEENEKLFERLTEKATSAGSTQVSSPSPKLLTNIQTGNLG 3
            +VTKKLEEEL KRDALIERLHEENEKLF+RLT+KA++AGS ++SSP      N+Q  ++G
Sbjct: 626  AVTKKLEEELKKRDALIERLHEENEKLFDRLTQKASTAGSPKLSSPLAHGSANVQPRDIG 685


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