BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011867
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95931.1| unknown [Populus trichocarpa]                           82   1e-13
ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|2...    74   4e-11
ref|XP_002533124.1| polypyrimidine tract binding protein, putati...    72   1e-10
ref|XP_003621259.1| Polypyrimidine tract-binding protein-like pr...    71   2e-10
ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...    68   2e-09

>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 28/140 (20%)
 Frame = -1

Query: 713 DISTAAVAKDALKGHCIYDGGYCLQ*QK*GLHTP-TIRCVCNATHFWSVLTAAMV----- 552
           D++TAAVAK+ L+GHCIYDGGYC        HT   ++   + +  +++  A+++     
Sbjct: 291 DVATAAVAKETLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLIAAQAP 350

Query: 551 --------WQNTLAVPLFPGS*YAGDGSVQPQGPTG*ATSWDSTMQAGRQAGRSSVP--- 405
                   WQN  A  ++ G+ YA   +V  Q P G   +WD TMQAG Q G +SVP   
Sbjct: 351 GLHTAPTMWQNPQAGSMYTGNNYATTAAVPVQVPPGQVPAWDPTMQAGGQ-GYASVPGTY 409

Query: 404 -----------AYATAAIPA 378
                      AYATAAIPA
Sbjct: 410 PGQTYPTPPASAYATAAIPA 429


>ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|222867070|gb|EEF04201.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 26/137 (18%)
 Frame = -1

Query: 713 DISTAAVAKDALKGHCIYDGGYCLQ*QK*GLHTP-TIRCVCNATHFWSV----------- 570
           D++TAAVAK+ L+GHCIYDGGYC        HT   ++   + +  +++           
Sbjct: 295 DVATAAVAKETLEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPDASFLTAQAP 354

Query: 569 --LTAAMVWQNTLAVPLFPGS*YAGDGSVQPQGPTG*ATSWDSTMQAGRQAGRSSV---- 408
              TA   WQN  A  ++ GS YA   +   Q P G   +WD +MQAG   G SSV    
Sbjct: 355 GLHTAPTTWQNPQAGSMYLGSNYATTAAAPAQVPPGQVAAWDPSMQAG-GPGYSSVRGMY 413

Query: 407 --------PAYATAAIP 381
                   PAYA++A+P
Sbjct: 414 PGQTYPTPPAYASSALP 430


>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 28/139 (20%)
 Frame = -1

Query: 713 DISTAAVAKDALKGHCIYDGGYCLQ*QK*GLHTP-TIRCVCNATHFWS------------ 573
           D++TAAVAK+ L+GHCIYDGGYC        HT   ++   + +  ++            
Sbjct: 299 DVATAAVAKETLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAAGQV 358

Query: 572 --VLTAAMVWQNTLAVPLFPGS*YAGDGSVQPQGPTG*ATSWDSTMQAGRQA-------- 423
             V TA  +WQN  A P++P + YA   +V  Q P G   +W+ +M+AG  A        
Sbjct: 359 PGVPTAPTMWQNPQASPMYPVNSYASAAAVTAQVPAGQVPAWNPSMEAGGPAYPSVPPGT 418

Query: 422 --GRS---SVPAYATAAIP 381
             G+S     P Y +AA+P
Sbjct: 419 FPGQSYPAPPPTYVSAAMP 437


>ref|XP_003621259.1| Polypyrimidine tract-binding protein-like protein [Medicago
           truncatula] gi|355496274|gb|AES77477.1| Polypyrimidine
           tract-binding protein-like protein [Medicago truncatula]
          Length = 780

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 22/133 (16%)
 Frame = -1

Query: 713 DISTAAVAKDALKGHCIYDGGYCLQ*QK*GLHTP-TIRCVCNATHFWSV-LTAAMVWQNT 540
           D++TAA A++AL+GHCIYDGGYC        HT   ++   + +  ++V L  A VWQN 
Sbjct: 580 DVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPAPVWQNP 639

Query: 539 LAVPLFPGS*YA-------GDGSVQPQGPTG*ATSWDSTMQA-------------GRQAG 420
            A P++P +  A       G  + Q Q P G   SWD T  A             G+   
Sbjct: 640 QAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAYPGQTGA 699

Query: 419 RSSVPAYATAAIP 381
             ++P+Y +AA+P
Sbjct: 700 FPTMPSYGSAAMP 712


>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
 Frame = -1

Query: 713 DISTAAVAKDALKGHCIYDGGYCLQ*QK*GLHTP-TIRCVCNATHFWSVLT--------- 564
           D++TAAVAK+AL+GHCIYDGGYC        HT   ++   + +  +++           
Sbjct: 262 DVTTAAVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQA 321

Query: 563 -----AAMVWQNTLAVPLFPGS*YAGDGSVQPQGPTG*ATSWDSTMQAGRQAGRSSVPA- 402
                A  VWQN  A PL+ G   A   +VQ         SWD  MQAGR    S+  A 
Sbjct: 322 PGHPGATTVWQNPQAAPLYTGHDAAAAAAVQ-------VPSWDPNMQAGRSTFASAASAF 374

Query: 401 ----YATAAIPAWTYNP 363
               +A+++I A+   P
Sbjct: 375 PSQPFASSSISAYPAPP 391