BLASTX nr result

ID: Panax21_contig00011861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011861
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX00365.1| IAA26 [Solanum lycopersicum]                            97   6e-18
ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-li...    94   3e-17
emb|CBI36050.3| unnamed protein product [Vitis vinifera]               94   3e-17
ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ric...    92   2e-16
gb|ADL36580.1| ARF domain class transcription factor [Malus x do...    89   1e-15

>gb|AEX00365.1| IAA26 [Solanum lycopersicum]
          Length = 287

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 49/74 (66%), Positives = 57/74 (77%)
 Frame = +1

Query: 349 KITPAPVVGWPPIRSFRKNLAXXXXXKLSPVPESQHVVPKKIDSEKKVENCCKGLFVKIN 528
           +  PAPVVGWPPIRSFRKNLA     K +   E+Q+VVP K  ++K +E C KGLFVKIN
Sbjct: 117 RTAPAPVVGWPPIRSFRKNLASSSSVKSAS--ETQNVVPNKSANKKPMEICQKGLFVKIN 174

Query: 529 MDGVPIGRKVDLKA 570
           MDG+PIGRKVDLKA
Sbjct: 175 MDGIPIGRKVDLKA 188


>ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-like [Vitis vinifera]
          Length = 364

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 52/71 (73%), Positives = 52/71 (73%)
 Frame = +1

Query: 358 PAPVVGWPPIRSFRKNLAXXXXXKLSPVPESQHVVPKKIDSEKKVENCCKGLFVKINMDG 537
           P  VVGWPPIRSFRKNLA     K  P  ESQ VVP KI SEK VE   KGLFVKINMDG
Sbjct: 189 PTAVVGWPPIRSFRKNLASSSSSK--PANESQDVVPNKIASEKPVEVGKKGLFVKINMDG 246

Query: 538 VPIGRKVDLKA 570
           VPIGRKVDL A
Sbjct: 247 VPIGRKVDLTA 257


>emb|CBI36050.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 52/71 (73%), Positives = 52/71 (73%)
 Frame = +1

Query: 358 PAPVVGWPPIRSFRKNLAXXXXXKLSPVPESQHVVPKKIDSEKKVENCCKGLFVKINMDG 537
           P  VVGWPPIRSFRKNLA     K  P  ESQ VVP KI SEK VE   KGLFVKINMDG
Sbjct: 189 PTAVVGWPPIRSFRKNLASSSSSK--PANESQDVVPNKIASEKPVEVGKKGLFVKINMDG 246

Query: 538 VPIGRKVDLKA 570
           VPIGRKVDL A
Sbjct: 247 VPIGRKVDLTA 257


>ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
           gi|223544864|gb|EEF46379.1| Auxin-responsive protein
           IAA6, putative [Ricinus communis]
          Length = 320

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 49/75 (65%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = +1

Query: 349 KITPAPVVGWPPIRSFRKNLAXXXXXKLSPVPESQHVVP-KKIDSEKKVENCCKGLFVKI 525
           +  P PVVGWPPIRSFRKNLA     K +   +SQ+  P KK+ SE  VE C KGLFVKI
Sbjct: 158 RTAPGPVVGWPPIRSFRKNLASSNSSKSAA--DSQNESPNKKVASENPVETCKKGLFVKI 215

Query: 526 NMDGVPIGRKVDLKA 570
           NMDGVPIGRKVDL+A
Sbjct: 216 NMDGVPIGRKVDLQA 230


>gb|ADL36580.1| ARF domain class transcription factor [Malus x domestica]
          Length = 325

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 48/74 (64%), Positives = 52/74 (70%)
 Frame = +1

Query: 349 KITPAPVVGWPPIRSFRKNLAXXXXXKLSPVPESQHVVPKKIDSEKKVENCCKGLFVKIN 528
           +  PAPVVGWPPIRSFRKNLA        P  ES++VV  K  + K VE   KGLFVKIN
Sbjct: 152 RTAPAPVVGWPPIRSFRKNLASKKGSS-KPAVESENVVQIKDPNGKSVETSGKGLFVKIN 210

Query: 529 MDGVPIGRKVDLKA 570
           MDGVPIGRKVDL A
Sbjct: 211 MDGVPIGRKVDLGA 224


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