BLASTX nr result

ID: Panax21_contig00011830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011830
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...   403   e-110
gb|AER26533.1| eukaryotic translation initiation factor 3G [Cari...   400   e-109
ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...   394   e-107
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   392   e-107

>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score =  403 bits (1036), Expect = e-110
 Identities = 203/256 (79%), Positives = 218/256 (85%), Gaps = 3/256 (1%)
 Frame = +2

Query: 110 PSKLRWXXXXXXXXXXXXXXXPPRQVIGPDENEIKKVIEYKFNDEGNXXXXXXXXRVRKL 289
           PSKLRW               PP+QVIGPD+N IKKVIEYKFND+GN        RVRKL
Sbjct: 9   PSKLRWGELDEDDGEDLDFLLPPKQVIGPDDNGIKKVIEYKFNDDGNKIKITTTTRVRKL 68

Query: 290 AKARLSKRAIERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGSKPEESKVAGDSL 469
           AKARLSKRA+ERR+WPKFGDAVHEDVG+RLTMVSTEEILLERPRAPG+K +E+K+AGD+L
Sbjct: 69  AKARLSKRAVERRNWPKFGDAVHEDVGSRLTMVSTEEILLERPRAPGTKADEAKMAGDNL 128

Query: 470 AQLGKGGGVLMVCRTCGKKGDHWTSRCPYKDLA--PQADVDKPPTSDTTM-ASGTTKGAY 640
           AQLGKGG VLMVCRTCGKKGDHWTSRCPYKDLA  P+  +DKP  ++T M ASG TKGAY
Sbjct: 129 AQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFIDKPAATETAMAASGATKGAY 188

Query: 641 VPPSMRAGAERPVGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGPVSRVYVAIDQK 820
           VPPSMRAGAER  GSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFG VSRVYVAIDQK
Sbjct: 189 VPPSMRAGAERTTGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGHVSRVYVAIDQK 248

Query: 821 TGVSRGFGFVNFVSKE 868
           TGVSRGFGFVNFVSKE
Sbjct: 249 TGVSRGFGFVNFVSKE 264


>gb|AER26533.1| eukaryotic translation initiation factor 3G [Carica papaya]
          Length = 297

 Score =  400 bits (1028), Expect = e-109
 Identities = 201/268 (75%), Positives = 222/268 (82%), Gaps = 3/268 (1%)
 Frame = +2

Query: 74  MAFERPGSAPKPPSKLRWXXXXXXXXXXXXXXXPPRQVIGPDENEIKKVIEYKFNDEGNX 253
           MA ++   +P+ PSKLRW               PP+QV GPDEN IK+VIEYKFN++GN 
Sbjct: 1   MAIDKTDPSPQQPSKLRWGELDEDDGEDLDFLLPPKQVHGPDENGIKRVIEYKFNEDGNR 60

Query: 254 XXXXXXXRVRKLAKARLSKRAIERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGS 433
                  RVRKLAKAR+SKRA+ERR W KFGDAVHEDVG+RLTMVSTEEILLERPRAPGS
Sbjct: 61  VKITTTTRVRKLAKARVSKRAMERRGWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGS 120

Query: 434 KPEESKVAGDSLAQLGKGGGVLMVCRTCGKKGDHWTSRCPYKDLAPQAD--VDKPPTSDT 607
           KPEE KVAGDSLAQLGKGG +LMVCRTCGKKGDHWTSRCPYKDLAPQ +  VDKP  S+T
Sbjct: 121 KPEEPKVAGDSLAQLGKGGAILMVCRTCGKKGDHWTSRCPYKDLAPQTEAFVDKPAASET 180

Query: 608 T-MASGTTKGAYVPPSMRAGAERPVGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFG 784
           +  A+G+ K  YVPPSMRAGAER  GSDMRRRN+ENSVRVTNLSEDTREPDLLELFRTFG
Sbjct: 181 SAAAAGSGKSTYVPPSMRAGAERTGGSDMRRRNDENSVRVTNLSEDTREPDLLELFRTFG 240

Query: 785 PVSRVYVAIDQKTGVSRGFGFVNFVSKE 868
           PV+RVYVAIDQKTGVSRGFGFVNFV++E
Sbjct: 241 PVTRVYVAIDQKTGVSRGFGFVNFVNRE 268


>ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  400 bits (1027), Expect = e-109
 Identities = 200/256 (78%), Positives = 218/256 (85%), Gaps = 3/256 (1%)
 Frame = +2

Query: 110 PSKLRWXXXXXXXXXXXXXXXPPRQVIGPDENEIKKVIEYKFNDEGNXXXXXXXXRVRKL 289
           P+K+RW               PP+QVIGPDEN IKKVIEYKFND+GN        RVRKL
Sbjct: 10  PAKMRWGELDEEDGEDLDFLLPPKQVIGPDENGIKKVIEYKFNDDGNKVKITTTTRVRKL 69

Query: 290 AKARLSKRAIERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGSKPEESKVAGDSL 469
           AKARLSKRA+ERR+W KFGDA+HEDVG+RLTMVSTEEILLERPRA G+K +E+K+AGD+L
Sbjct: 70  AKARLSKRALERRNWSKFGDAIHEDVGSRLTMVSTEEILLERPRAHGAKADETKIAGDNL 129

Query: 470 AQLGKGGGVLMVCRTCGKKGDHWTSRCPYKDLA--PQADVDKPPTSDTTM-ASGTTKGAY 640
           AQLGKGG VLMVCRTCGKKGDHWTSRCPYKDLA  P+  +DKPP ++T M A+G TKGAY
Sbjct: 130 AQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFIDKPPATETAMAATGATKGAY 189

Query: 641 VPPSMRAGAERPVGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGPVSRVYVAIDQK 820
           VPPSMRAGAER VGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFG VSRVYVAIDQK
Sbjct: 190 VPPSMRAGAERTVGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGQVSRVYVAIDQK 249

Query: 821 TGVSRGFGFVNFVSKE 868
           TGVSRGFGFVNFVSKE
Sbjct: 250 TGVSRGFGFVNFVSKE 265


>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 301

 Score =  394 bits (1013), Expect = e-107
 Identities = 202/261 (77%), Positives = 217/261 (83%), Gaps = 3/261 (1%)
 Frame = +2

Query: 95  SAPKPPSKLRWXXXXXXXXXXXXXXXPPRQVIGPDENEIKKVIEYKFNDEGNXXXXXXXX 274
           S P    K+RW               PPRQVIGP+EN IKKVIEYKFN++GN        
Sbjct: 13  SNPPKAEKIRWGELDEDDGEDLDFLLPPRQVIGPEENGIKKVIEYKFNEDGNKVKITTTT 72

Query: 275 RVRKLAKARLSKRAIERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGSKPEESKV 454
           RVRKLAKARLSKRA+ERRSW KFGDAVHEDVG+RLTMVSTEEILLERPRAPG+K EE+K+
Sbjct: 73  RVRKLAKARLSKRAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGTKAEETKI 132

Query: 455 AGDSLAQLGKGGGVLMVCRTCGKKGDHWTSRCPYKDLAPQAD--VDKPPTSDTTMA-SGT 625
           AGDSLAQLGKGG VLMVCRTCGKKGDHWTSRCPYKDLA Q D  VDKPP ++TT+A +GT
Sbjct: 133 AGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAAQTDAFVDKPPAAETTVATTGT 192

Query: 626 TKGAYVPPSMRAGAERPVGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGPVSRVYV 805
            K AYVPP MR GAER VGSDMRRRNEENSVRVTNLSEDTREPDL ELFRTFGPVSRVYV
Sbjct: 193 GKAAYVPPGMRPGAER-VGSDMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYV 251

Query: 806 AIDQKTGVSRGFGFVNFVSKE 868
           AIDQKTG+SRGFGFVNFV+KE
Sbjct: 252 AIDQKTGMSRGFGFVNFVNKE 272


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score =  392 bits (1007), Expect = e-107
 Identities = 202/268 (75%), Positives = 217/268 (80%), Gaps = 3/268 (1%)
 Frame = +2

Query: 74  MAFERPGSAPKPPSKLRWXXXXXXXXXXXXXXXPPRQVIGPDENEIKKVIEYKFNDEGNX 253
           MA +         SKLRW               PPRQVIGPD+N IKKVIEYKFND+GN 
Sbjct: 1   MAIDNKPGWGSTQSKLRWGELEEDDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFNDDGNK 60

Query: 254 XXXXXXXRVRKLAKARLSKRAIERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGS 433
                  R+RKLAKARLSKRAIERRSW KFGDAVHEDVG+RLTMVSTEEILLERPRAPGS
Sbjct: 61  VKITTTTRIRKLAKARLSKRAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGS 120

Query: 434 KPEESKVAGDSLAQLGKGGGVLMVCRTCGKKGDHWTSRCPYKDLAPQAD--VDKPPTSD- 604
           K EESKVAGDSLAQLGKGG VLMVCRTCGKKGDHWTSRCPYKDLAP ++  +DKP  S+ 
Sbjct: 121 KAEESKVAGDSLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEG 180

Query: 605 TTMASGTTKGAYVPPSMRAGAERPVGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFG 784
           T  ASG +KG YVPP MRAGAER  G++MRRRNEENSVRVTNLSEDTREPDL ELFRTFG
Sbjct: 181 TATASGPSKGTYVPPGMRAGAER-TGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFG 239

Query: 785 PVSRVYVAIDQKTGVSRGFGFVNFVSKE 868
           PVSRVYVA+DQKTG+SRGFGFVNFV+KE
Sbjct: 240 PVSRVYVAVDQKTGMSRGFGFVNFVNKE 267


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