BLASTX nr result
ID: Panax21_contig00011777
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00011777 (521 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p... 143 1e-32 ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2... 143 2e-32 ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ... 141 6e-32 ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-31 ref|XP_003544732.1| PREDICTED: ribosome maturation protein SBDS-... 136 2e-30 >ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus communis] gi|223540466|gb|EEF42033.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus communis] Length = 356 Score = 143 bits (361), Expect = 1e-32 Identities = 66/87 (75%), Positives = 80/87 (91%) Frame = -1 Query: 515 VQLNEKMQKQTISDKKEDAVGDVKQNKCSTCNAFVGDAKQYREHFKSEWHKHNLRRKTKQ 336 VQL+EK+QKQTIS +K++ G+VKQ+KC+TCNAFVGDAK+YR+HFKSEWHKHNLRRKT+ Sbjct: 271 VQLSEKIQKQTISAEKKNE-GEVKQHKCNTCNAFVGDAKEYRDHFKSEWHKHNLRRKTRH 329 Query: 335 LPPLTAEECMGDIEIGDSKADLKDYSF 255 L PLTAEEC+ D+E+ DSKADLKDYSF Sbjct: 330 LLPLTAEECLADVELDDSKADLKDYSF 356 >ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1| predicted protein [Populus trichocarpa] Length = 356 Score = 143 bits (360), Expect = 2e-32 Identities = 67/88 (76%), Positives = 80/88 (90%), Gaps = 1/88 (1%) Frame = -1 Query: 515 VQLNEKMQKQTISD-KKEDAVGDVKQNKCSTCNAFVGDAKQYREHFKSEWHKHNLRRKTK 339 VQL+EK+QKQTIS+ KK D + KQNKCSTCNAFVGDAKQ+R+HFKS+WHKHNL+RKTK Sbjct: 271 VQLSEKIQKQTISEEKKADTLA--KQNKCSTCNAFVGDAKQFRDHFKSDWHKHNLKRKTK 328 Query: 338 QLPPLTAEECMGDIEIGDSKADLKDYSF 255 QLPPLTAEEC+ D+++ DSKADLK+YSF Sbjct: 329 QLPPLTAEECLADMDLNDSKADLKEYSF 356 >ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera] gi|302142747|emb|CBI19950.3| unnamed protein product [Vitis vinifera] Length = 358 Score = 141 bits (355), Expect = 6e-32 Identities = 64/87 (73%), Positives = 76/87 (87%) Frame = -1 Query: 515 VQLNEKMQKQTISDKKEDAVGDVKQNKCSTCNAFVGDAKQYREHFKSEWHKHNLRRKTKQ 336 +QL+EK+Q+QTIS G+VKQNKCSTC+AFVGD+KQYREHFKSEWHKHNL RKT+Q Sbjct: 272 LQLSEKVQRQTISVGSSSTEGEVKQNKCSTCDAFVGDSKQYREHFKSEWHKHNLGRKTRQ 331 Query: 335 LPPLTAEECMGDIEIGDSKADLKDYSF 255 LPPL+AEEC+ D+E+ D KADLKDYSF Sbjct: 332 LPPLSAEECLTDMEMNDLKADLKDYSF 358 >ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|222856124|gb|EEE93671.1| predicted protein [Populus trichocarpa] Length = 357 Score = 140 bits (353), Expect = 1e-31 Identities = 62/88 (70%), Positives = 80/88 (90%) Frame = -1 Query: 518 SVQLNEKMQKQTISDKKEDAVGDVKQNKCSTCNAFVGDAKQYREHFKSEWHKHNLRRKTK 339 +VQL+EK+QKQT+SD+K+ A +VKQNKCSTCN VGDAKQ+R+HFKS+WHKHNL+RKTK Sbjct: 271 AVQLSEKIQKQTLSDEKK-AGAEVKQNKCSTCNVSVGDAKQFRDHFKSDWHKHNLKRKTK 329 Query: 338 QLPPLTAEECMGDIEIGDSKADLKDYSF 255 QLPPLT+EEC+GD+++ DS D+K+YSF Sbjct: 330 QLPPLTSEECLGDMDMNDSNTDIKEYSF 357 >ref|XP_003544732.1| PREDICTED: ribosome maturation protein SBDS-like [Glycine max] Length = 358 Score = 136 bits (343), Expect = 2e-30 Identities = 64/90 (71%), Positives = 72/90 (80%), Gaps = 1/90 (1%) Frame = -1 Query: 521 DSV-QLNEKMQKQTISDKKEDAVGDVKQNKCSTCNAFVGDAKQYREHFKSEWHKHNLRRK 345 DSV QLNEK+QKQTIS G KQNKCSTCN D+K YREH KSEWHKHN++RK Sbjct: 269 DSVLQLNEKLQKQTISSTSRPTEGQQKQNKCSTCNVSFDDSKLYREHHKSEWHKHNIKRK 328 Query: 344 TKQLPPLTAEECMGDIEIGDSKADLKDYSF 255 T+QLPPLT EECM D+E+GDSK+DLKDYSF Sbjct: 329 TRQLPPLTEEECMADMELGDSKSDLKDYSF 358