BLASTX nr result

ID: Panax21_contig00011740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011740
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isof...   412   e-113
ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isof...   407   e-111
ref|XP_002529160.1| tubulin-specific chaperone B, putative [Rici...   396   e-108
ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like...   394   e-107
ref|XP_002307984.1| tubulin folding cofactor [Populus trichocarp...   388   e-105

>ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isoform 1 [Vitis vinifera]
           gi|359482231|ref|XP_003632738.1| PREDICTED:
           tubulin-specific chaperone B [Vitis vinifera]
           gi|297739921|emb|CBI30103.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  412 bits (1060), Expect = e-113
 Identities = 191/242 (78%), Positives = 221/242 (91%)
 Frame = +3

Query: 150 MMSLLQVQGDESVILHISHSNMKSFAADVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELY 329
           M S LQ+Q DESV L ++H N+KSF+ADVRFSLQMTVE+VK+KLW+KCGTSVNSMCLELY
Sbjct: 1   MASRLQIQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 330 DDSGTKISDLSDNMKPLGFYSPQDGYRLHVMDLDPSSVTSGGWLDDTSLVEKYTISEEAY 509
           DD+G KIS LSDN++PLGFYSPQDGYRLHV+DLDPSSVTSGGWL+DTSLVEKY+ISEEAY
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 120

Query: 510 DKLDGTYRKFKEKYDHQSPTTHVSKMSENYLEDLCINIKVGGRCQVDPGEKRGVIKFVGR 689
           +KLDGT+RKFKEK   Q+P+   SK+S++Y+ DLC NIKVG RC+V+PGEKRGV+KFVGR
Sbjct: 121 EKLDGTFRKFKEKLAFQNPSILESKISDHYMGDLCANIKVGDRCEVEPGEKRGVVKFVGR 180

Query: 690 TETLGPGFWVGIQYDEPLGKHDGMVKGMRYFDCPPLHGAMMRPDKVKVGDYPERDPFEEE 869
            ++L PGFWVG+QYDEPLGKHDGMVKG RYFDCPPLHGAM+RPDKVKVGDYPERD FEE+
Sbjct: 181 AQSLAPGFWVGVQYDEPLGKHDGMVKGTRYFDCPPLHGAMVRPDKVKVGDYPERDLFEED 240

Query: 870 EI 875
           EI
Sbjct: 241 EI 242


>ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isoform 2 [Vitis vinifera]
          Length = 243

 Score =  407 bits (1046), Expect = e-111
 Identities = 189/243 (77%), Positives = 222/243 (91%), Gaps = 1/243 (0%)
 Frame = +3

Query: 150 MMSLLQVQGDESVILHISHSNMKSFAADVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELY 329
           M S LQ+Q DESV L ++H N+KSF+ADVRFSLQMTVE+VK+KLW+KCGTSVNSMCLELY
Sbjct: 1   MASRLQIQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 330 DDSGTKISDLSDNMKPLGFYSPQDGYRLHVMDLDPSSVTSGGWLDDTSLVEKYTISEEAY 509
           DD+G KIS LSDN++PLGFYSPQDGYRLHV+DLDPSSVTSGGWL+DTSLVEKY+ISEEAY
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSVTSGGWLEDTSLVEKYSISEEAY 120

Query: 510 DKLDGTYRKFKEKYDHQSPTTHVS-KMSENYLEDLCINIKVGGRCQVDPGEKRGVIKFVG 686
           +KLDGT+RKFKEK   Q+P++ +  ++S++Y+ DLC NIKVG RC+V+PGEKRGV+KFVG
Sbjct: 121 EKLDGTFRKFKEKLAFQNPSSDLCLQISDHYMGDLCANIKVGDRCEVEPGEKRGVVKFVG 180

Query: 687 RTETLGPGFWVGIQYDEPLGKHDGMVKGMRYFDCPPLHGAMMRPDKVKVGDYPERDPFEE 866
           R ++L PGFWVG+QYDEPLGKHDGMVKG RYFDCPPLHGAM+RPDKVKVGDYPERD FEE
Sbjct: 181 RAQSLAPGFWVGVQYDEPLGKHDGMVKGTRYFDCPPLHGAMVRPDKVKVGDYPERDLFEE 240

Query: 867 EEI 875
           +EI
Sbjct: 241 DEI 243


>ref|XP_002529160.1| tubulin-specific chaperone B, putative [Ricinus communis]
           gi|223531384|gb|EEF33219.1| tubulin-specific chaperone
           B, putative [Ricinus communis]
          Length = 243

 Score =  396 bits (1018), Expect = e-108
 Identities = 177/239 (74%), Positives = 216/239 (90%)
 Frame = +3

Query: 159 LLQVQGDESVILHISHSNMKSFAADVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELYDDS 338
           L +++GDESV+L I+HSN+K+F+ADVRFSL+ TVE+VKEKLW+KCGTSVNSM L+LYDD+
Sbjct: 5   LQKIEGDESVVLRITHSNLKTFSADVRFSLESTVESVKEKLWRKCGTSVNSMTLQLYDDT 64

Query: 339 GTKISDLSDNMKPLGFYSPQDGYRLHVMDLDPSSVTSGGWLDDTSLVEKYTISEEAYDKL 518
            +KI DLSD+ +PLGFYSP DGYR+HV+D+DPSSVTSGGWL+DTSLVEKYTISEEAY+K 
Sbjct: 65  NSKICDLSDDSRPLGFYSPLDGYRIHVIDVDPSSVTSGGWLEDTSLVEKYTISEEAYEKR 124

Query: 519 DGTYRKFKEKYDHQSPTTHVSKMSENYLEDLCINIKVGGRCQVDPGEKRGVIKFVGRTET 698
            GT+RKFKEK   Q+P+    K++ENY+EDLC NIK+G RC+V+PG KRG++KFVGR E+
Sbjct: 125 GGTFRKFKEKLVSQNPSAFEPKITENYMEDLCANIKLGDRCEVEPGAKRGIVKFVGRAES 184

Query: 699 LGPGFWVGIQYDEPLGKHDGMVKGMRYFDCPPLHGAMMRPDKVKVGDYPERDPFEEEEI 875
           L PGFWVG+QYDEPLGKHDG+VKG+RYFDCPPLHG M+RPDK+KVGDYPERDPFE+EEI
Sbjct: 185 LAPGFWVGVQYDEPLGKHDGLVKGVRYFDCPPLHGGMIRPDKIKVGDYPERDPFEDEEI 243


>ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like [Cucumis sativus]
          Length = 245

 Score =  394 bits (1013), Expect = e-107
 Identities = 179/238 (75%), Positives = 214/238 (89%)
 Frame = +3

Query: 159 LLQVQGDESVILHISHSNMKSFAADVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELYDDS 338
           L Q++ DESV+L ++H+N+KSF +DVRFSLQM+VE+VKEKLW+KCGTSVNSMCLELYDDS
Sbjct: 5   LQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELYDDS 64

Query: 339 GTKISDLSDNMKPLGFYSPQDGYRLHVMDLDPSSVTSGGWLDDTSLVEKYTISEEAYDKL 518
           G+KISDL+DN  PLGFYSP DGYRLH++DLDPSSVTSGGWL+DTSLVEK+ ISEEAYDK 
Sbjct: 65  GSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEAYDKR 124

Query: 519 DGTYRKFKEKYDHQSPTTHVSKMSENYLEDLCINIKVGGRCQVDPGEKRGVIKFVGRTET 698
           D T+RKFKEK   Q+P+   SK+S+NY+E+LC NIKVG RCQV+PGEKRGV+KFVGR E+
Sbjct: 125 DDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVGRAES 184

Query: 699 LGPGFWVGIQYDEPLGKHDGMVKGMRYFDCPPLHGAMMRPDKVKVGDYPERDPFEEEE 872
           L PGFWVG+QYDEPLGK+DG VKG+ YFDC P HGAM+RPDKVKVG+YPERDPF++E+
Sbjct: 185 LAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPFHGAMVRPDKVKVGNYPERDPFDDED 242


>ref|XP_002307984.1| tubulin folding cofactor [Populus trichocarpa]
           gi|118483420|gb|ABK93610.1| unknown [Populus
           trichocarpa] gi|222853960|gb|EEE91507.1| tubulin folding
           cofactor [Populus trichocarpa]
          Length = 243

 Score =  388 bits (997), Expect = e-105
 Identities = 174/240 (72%), Positives = 215/240 (89%)
 Frame = +3

Query: 156 SLLQVQGDESVILHISHSNMKSFAADVRFSLQMTVEAVKEKLWKKCGTSVNSMCLELYDD 335
           S  Q+Q DE+V+L ++HSN+KSF+A++RFSLQ +VEAVK+KLW+KCGTSVNSM LELYDD
Sbjct: 4   SRFQIQPDEAVLLRVTHSNIKSFSAEIRFSLQSSVEAVKDKLWRKCGTSVNSMQLELYDD 63

Query: 336 SGTKISDLSDNMKPLGFYSPQDGYRLHVMDLDPSSVTSGGWLDDTSLVEKYTISEEAYDK 515
           + +K+S+L+D+ +PLGFYSP DGYRLH++DLDPSSVT+GGWL+D S VEKY+ISEEAYDK
Sbjct: 64  ANSKVSNLTDDSRPLGFYSPFDGYRLHIIDLDPSSVTAGGWLEDISSVEKYSISEEAYDK 123

Query: 516 LDGTYRKFKEKYDHQSPTTHVSKMSENYLEDLCINIKVGGRCQVDPGEKRGVIKFVGRTE 695
            DGT+RKFKEK   Q+P+    K++++Y+EDLC NIKVG RC++DPGEKRGV+K+VGR E
Sbjct: 124 RDGTFRKFKEKMAAQNPSAFAPKITDDYMEDLCANIKVGDRCEIDPGEKRGVVKYVGRAE 183

Query: 696 TLGPGFWVGIQYDEPLGKHDGMVKGMRYFDCPPLHGAMMRPDKVKVGDYPERDPFEEEEI 875
           +L PGFWVG+Q+DEP GKHDGMVKG+RYFD PPLHGAM+RPDKVKVGDYPERDPFEEEEI
Sbjct: 184 SLAPGFWVGVQFDEPFGKHDGMVKGVRYFDSPPLHGAMIRPDKVKVGDYPERDPFEEEEI 243


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