BLASTX nr result

ID: Panax21_contig00011676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011676
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301682.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_002532530.1| Aspartic proteinase nepenthesin-1 precursor,...   141   6e-32
ref|XP_002305886.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|NP_564867.1| aspartyl protease-like protein [Arabidopsis tha...   137   9e-31
gb|AAM67226.1| unknown [Arabidopsis thaliana]                         137   9e-31

>ref|XP_002301682.1| predicted protein [Populus trichocarpa] gi|222843408|gb|EEE80955.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/118 (61%), Positives = 83/118 (70%)
 Frame = -3

Query: 355 SQQLHKTTHDSSTYTNSHLNFHFRSWFKYSMALIVSLPIGTPPQTQQMVLDTGSQLSWIQ 176
           SQ    +T  SS++++S  N+  RS FKYSM L+VSLPIGTPPQTQQM+LDTGSQLSWIQ
Sbjct: 52  SQTKKASTLKSSSFSSSPYNY--RSGFKYSMILLVSLPIGTPPQTQQMILDTGSQLSWIQ 109

Query: 175 CHKKARSKHXXXXXXXXXXXXXXXXXPCNHPLCRPAIPDFTLPTSCDRNRHCHYSYFY 2
           CHKK   K                  PCNHPLC+P IPDFTLPTSCD+NR CHYSYFY
Sbjct: 110 CHKKVPRKPPPSSVFDPSLSSSFSVLPCNHPLCKPRIPDFTLPTSCDQNRLCHYSYFY 167


>ref|XP_002532530.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus
           communis] gi|223527742|gb|EEF29846.1| Aspartic
           proteinase nepenthesin-1 precursor, putative [Ricinus
           communis]
          Length = 440

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/100 (68%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 NFHFRSWFKYSMALIVSLPIGTPPQTQQMVLDTGSQLSWIQCHKKA-RSKHXXXXXXXXX 122
           ++++RS FKYSMALIVSLPIGTPPQTQQMVLDTGSQLSWIQCHKK+   K          
Sbjct: 67  SYNYRSSFKYSMALIVSLPIGTPPQTQQMVLDTGSQLSWIQCHKKSVPKKPPPTTSFDPS 126

Query: 121 XXXXXXXXPCNHPLCRPAIPDFTLPTSCDRNRHCHYSYFY 2
                   PCNHPLC+P IPDFTLPT+CD+NR CHYSYFY
Sbjct: 127 LSSSFSVLPCNHPLCKPRIPDFTLPTTCDQNRLCHYSYFY 166


>ref|XP_002305886.1| predicted protein [Populus trichocarpa] gi|222848850|gb|EEE86397.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/98 (66%), Positives = 72/98 (73%)
 Frame = -3

Query: 295 FHFRSWFKYSMALIVSLPIGTPPQTQQMVLDTGSQLSWIQCHKKARSKHXXXXXXXXXXX 116
           +++RS FKYSM L+VSLPIGTPPQ+QQM+LDTGSQLSWIQCHKK   K            
Sbjct: 65  YNYRSRFKYSMILLVSLPIGTPPQSQQMILDTGSQLSWIQCHKKVPRKPPPSTVFDPSLS 124

Query: 115 XXXXXXPCNHPLCRPAIPDFTLPTSCDRNRHCHYSYFY 2
                 PCNHPLC+P IPDFTLPTSCD NR CHYSYFY
Sbjct: 125 SSFSVLPCNHPLCKPRIPDFTLPTSCDLNRLCHYSYFY 162


>ref|NP_564867.1| aspartyl protease-like protein [Arabidopsis thaliana]
           gi|12322615|gb|AAG51309.1|AC026480_16 unknown protein
           [Arabidopsis thaliana] gi|14334808|gb|AAK59582.1|
           unknown protein [Arabidopsis thaliana]
           gi|15293195|gb|AAK93708.1| unknown protein [Arabidopsis
           thaliana] gi|332196351|gb|AEE34472.1| aspartyl
           protease-like protein [Arabidopsis thaliana]
          Length = 430

 Score =  137 bits (345), Expect = 9e-31
 Identities = 75/139 (53%), Positives = 87/139 (62%), Gaps = 18/139 (12%)
 Frame = -3

Query: 364 ISSSQQLH--------KTTHDSSTYTNSHLN----------FHFRSWFKYSMALIVSLPI 239
           +S+S  LH         TT +S  +T S L+          ++FRS FKYSMALI+SLPI
Sbjct: 19  LSTSLSLHLPLTSLPISTTTNSHRFTTSLLSRKNPSPSSPPYNFRSRFKYSMALIISLPI 78

Query: 238 GTPPQTQQMVLDTGSQLSWIQCHKKARSKHXXXXXXXXXXXXXXXXXPCNHPLCRPAIPD 59
           GTPPQ QQMVLDTGSQLSWIQCH+K +                    PC+HPLC+P IPD
Sbjct: 79  GTPPQAQQMVLDTGSQLSWIQCHRK-KLPPKPKTSFDPSLSSSFSTLPCSHPLCKPRIPD 137

Query: 58  FTLPTSCDRNRHCHYSYFY 2
           FTLPTSCD NR CHYSYFY
Sbjct: 138 FTLPTSCDSNRLCHYSYFY 156


>gb|AAM67226.1| unknown [Arabidopsis thaliana]
          Length = 430

 Score =  137 bits (345), Expect = 9e-31
 Identities = 75/139 (53%), Positives = 87/139 (62%), Gaps = 18/139 (12%)
 Frame = -3

Query: 364 ISSSQQLH--------KTTHDSSTYTNSHLN----------FHFRSWFKYSMALIVSLPI 239
           +S+S  LH         TT +S  +T S L+          ++FRS FKYSMALI+SLPI
Sbjct: 19  LSTSLSLHLPLTSLPISTTTNSHRFTTSLLSRKNPSPSSPPYNFRSRFKYSMALIISLPI 78

Query: 238 GTPPQTQQMVLDTGSQLSWIQCHKKARSKHXXXXXXXXXXXXXXXXXPCNHPLCRPAIPD 59
           GTPPQ QQMVLDTGSQLSWIQCH+K +                    PC+HPLC+P IPD
Sbjct: 79  GTPPQAQQMVLDTGSQLSWIQCHRK-KLPPKPKTSFDPSLSSSFSTLPCSHPLCKPRIPD 137

Query: 58  FTLPTSCDRNRHCHYSYFY 2
           FTLPTSCD NR CHYSYFY
Sbjct: 138 FTLPTSCDSNRLCHYSYFY 156


Top