BLASTX nr result

ID: Panax21_contig00011620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011620
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [V...    64   6e-09
emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]    64   6e-09
emb|CBI30776.3| unnamed protein product [Vitis vinifera]               64   6e-09
ref|XP_002519772.1| bromodomain-containing protein, putative [Ri...    56   9e-08
ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [G...    62   1e-07

>ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
          Length = 588

 Score = 63.9 bits (154), Expect(2) = 6e-09
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -1

Query: 480 TPGIDIQLSPKKALRAAMLKSRFADTILKAKQKILLKH 367
           TP  D+QLSPKKALRAAMLKSRFADTILKA+QK LL H
Sbjct: 408 TPIFDVQLSPKKALRAAMLKSRFADTILKAQQKTLLDH 445



 Score = 22.3 bits (46), Expect(2) = 6e-09
 Identities = 18/73 (24%), Positives = 27/73 (36%)
 Frame = -2

Query: 719 EVKSMLTSTMCKSDPESDGEDGILFVYHNILCVYYSGISMLLK*FEVVGVLDKENMCSCP 540
           +VK+ + S + KSDP+SDG                            V  +D EN+C+  
Sbjct: 360 QVKNTI-SRISKSDPDSDG---------------------------AVSAVDDENICTSS 391

Query: 539 RHSTLLTTVTSGD 501
              T  T    G+
Sbjct: 392 HPMTPTTAAAPGE 404


>emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]
          Length = 588

 Score = 63.9 bits (154), Expect(2) = 6e-09
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -1

Query: 480 TPGIDIQLSPKKALRAAMLKSRFADTILKAKQKILLKH 367
           TP  D+QLSPKKALRAAMLKSRFADTILKA+QK LL H
Sbjct: 408 TPIFDVQLSPKKALRAAMLKSRFADTILKAQQKTLLDH 445



 Score = 22.3 bits (46), Expect(2) = 6e-09
 Identities = 18/73 (24%), Positives = 27/73 (36%)
 Frame = -2

Query: 719 EVKSMLTSTMCKSDPESDGEDGILFVYHNILCVYYSGISMLLK*FEVVGVLDKENMCSCP 540
           +VK+ + S + KSDP+SDG                            V  +D EN+C+  
Sbjct: 360 QVKNTI-SRISKSDPDSDG---------------------------AVSAVDDENICTSS 391

Query: 539 RHSTLLTTVTSGD 501
              T  T    G+
Sbjct: 392 HPMTPTTAAAPGE 404


>emb|CBI30776.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 63.9 bits (154), Expect(2) = 6e-09
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -1

Query: 480 TPGIDIQLSPKKALRAAMLKSRFADTILKAKQKILLKH 367
           TP  D+QLSPKKALRAAMLKSRFADTILKA+QK LL H
Sbjct: 393 TPIFDVQLSPKKALRAAMLKSRFADTILKAQQKTLLDH 430



 Score = 22.3 bits (46), Expect(2) = 6e-09
 Identities = 18/73 (24%), Positives = 27/73 (36%)
 Frame = -2

Query: 719 EVKSMLTSTMCKSDPESDGEDGILFVYHNILCVYYSGISMLLK*FEVVGVLDKENMCSCP 540
           +VK+ + S + KSDP+SDG                            V  +D EN+C+  
Sbjct: 345 QVKNTI-SRISKSDPDSDG---------------------------AVSAVDDENICTSS 376

Query: 539 RHSTLLTTVTSGD 501
              T  T    G+
Sbjct: 377 HPMTPTTAAAPGE 389


>ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
           gi|223541189|gb|EEF42745.1| bromodomain-containing
           protein, putative [Ricinus communis]
          Length = 570

 Score = 55.8 bits (133), Expect(2) = 9e-08
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -1

Query: 477 PGIDIQLSPKKALRAAMLKSRFADTILKAKQKILLKH 367
           P  D+QLSP KALRAAMLK RFADTILKA+ K LL H
Sbjct: 390 PIFDVQLSPTKALRAAMLKRRFADTILKAQHKTLLDH 426



 Score = 26.6 bits (57), Expect(2) = 9e-08
 Identities = 25/78 (32%), Positives = 30/78 (38%)
 Frame = -2

Query: 728 MDHEVKSMLTSTMCKSDPESDGEDGILFVYHNILCVYYSGISMLLK*FEVVGVLDKENMC 549
           MD + K M    M KSDP+SDG                            V  LD+EN+C
Sbjct: 337 MDVQGKCMSMLQMSKSDPDSDG---------------------------AVSALDEENIC 369

Query: 548 SCPRHSTLLTTVTSGDAN 495
                S L+T  T  DAN
Sbjct: 370 P---SSQLMTPAT--DAN 382


>ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [Glycine max]
          Length = 565

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = -1

Query: 480 TPGIDIQLSPKKALRAAMLKSRFADTILKAKQKILLKH 367
           TP + +QLSPKKALRAAMLKSRFADTILKA+QK LL H
Sbjct: 382 TPVLPVQLSPKKALRAAMLKSRFADTILKAQQKTLLDH 419


Top