BLASTX nr result

ID: Panax21_contig00011594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011594
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...    56   2e-12
ref|XP_004149653.1| PREDICTED: protein argonaute 4-like [Cucumis...    56   2e-12
gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]       54   2e-12
gb|AFV15382.1| AGO4B [Solanum lycopersicum]                            52   5e-11
ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...    50   1e-10

>ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 4-like [Cucumis
           sativus]
          Length = 915

 Score = 55.8 bits (133), Expect(2) = 2e-12
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = -3

Query: 327 KGQKISLQTNHFKMNVTNIKGHFFHYS 247
           KGQKISL TNHFK+NVTNI+GHFFHYS
Sbjct: 59  KGQKISLLTNHFKVNVTNIEGHFFHYS 85



 Score = 41.2 bits (95), Expect(2) = 2e-12
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 410 MRAEADPIAEPVKKKIVRVPIARCGLASRGKK 315
           ++AE +   E VKKK+VRVPIAR GLAS+G+K
Sbjct: 31  IQAELEQAPEIVKKKVVRVPIARRGLASKGQK 62


>ref|XP_004149653.1| PREDICTED: protein argonaute 4-like [Cucumis sativus]
          Length = 915

 Score = 55.8 bits (133), Expect(2) = 2e-12
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = -3

Query: 327 KGQKISLQTNHFKMNVTNIKGHFFHYS 247
           KGQKISL TNHFK+NVTNI+GHFFHYS
Sbjct: 59  KGQKISLLTNHFKVNVTNIEGHFFHYS 85



 Score = 41.2 bits (95), Expect(2) = 2e-12
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 410 MRAEADPIAEPVKKKIVRVPIARCGLASRGKK 315
           ++AE +   E VKKK+VRVPIAR GLAS+G+K
Sbjct: 31  IQAELEQAPEIVKKKVVRVPIARRGLASKGQK 62


>gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]
          Length = 933

 Score = 53.5 bits (127), Expect(2) = 2e-12
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = -3

Query: 327 KGQKISLQTNHFKMNVTNIKGHFFHYS 247
           KGQKI L TNHFK+NVTN++GHFFHYS
Sbjct: 76  KGQKIPLLTNHFKVNVTNVEGHFFHYS 102



 Score = 43.1 bits (100), Expect(2) = 2e-12
 Identities = 20/32 (62%), Positives = 27/32 (84%)
 Frame = -1

Query: 410 MRAEADPIAEPVKKKIVRVPIARCGLASRGKK 315
           +RA+ +   EPVKKK++RVPIAR GLAS+G+K
Sbjct: 48  VRADTELPLEPVKKKVLRVPIARRGLASKGQK 79


>gb|AFV15382.1| AGO4B [Solanum lycopersicum]
          Length = 913

 Score = 52.0 bits (123), Expect(2) = 5e-11
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = -3

Query: 333 GIKGQKISLQTNHFKMNVTNIKGHFFHYS 247
           G KGQKI + TNHFK+NV+N+ GHFFHYS
Sbjct: 48  GSKGQKIPILTNHFKVNVSNVDGHFFHYS 76



 Score = 40.0 bits (92), Expect(2) = 5e-11
 Identities = 19/30 (63%), Positives = 26/30 (86%)
 Frame = -1

Query: 404 AEADPIAEPVKKKIVRVPIARCGLASRGKK 315
           A+A+P  EPVKKK++RVP+AR GL S+G+K
Sbjct: 26  AQAEP--EPVKKKVLRVPMARRGLGSKGQK 53


>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score = 50.1 bits (118), Expect(2) = 1e-10
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -3

Query: 327 KGQKISLQTNHFKMNVTNIKGHFFHYS 247
           KGQKI+L TNHFK+NVT   GHFFHYS
Sbjct: 54  KGQKIALTTNHFKVNVTGADGHFFHYS 80



 Score = 40.4 bits (93), Expect(2) = 1e-10
 Identities = 20/30 (66%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
 Frame = -1

Query: 401 EADPIA-EPVKKKIVRVPIARCGLASRGKK 315
           +AD +A EPVKKK+ RVPIAR G AS+G+K
Sbjct: 28  KADSVASEPVKKKVARVPIARRGFASKGQK 57


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