BLASTX nr result

ID: Panax21_contig00011562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011562
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33788.1| unnamed protein product [Thellungiella halophila]     196   2e-48
ref|XP_002866922.1| hypothetical protein ARALYDRAFT_490821 [Arab...   196   2e-48
ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, ...   196   2e-48
sp|P50433.1|GLYM_SOLTU RecName: Full=Serine hydroxymethyltransfe...   196   2e-48
gb|AAL06913.1| AT4g37930/F20D10_50 [Arabidopsis thaliana]             195   3e-48

>dbj|BAJ33788.1| unnamed protein product [Thellungiella halophila]
          Length = 518

 Score =  196 bits (498), Expect = 2e-48
 Identities = 97/113 (85%), Positives = 107/113 (94%)
 Frame = +3

Query: 3   LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDSAVNLALKIK 182
           LE+VHIA+NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA++FD AV LALK+K
Sbjct: 406 LEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTLALKVK 465

Query: 183 SETKGTKLKDFLTAMQSSVPIQSEIAKLCHEVEEYAKQFPTIGFEKETMKYKN 341
           SE +GTKLKDF++AM+SS  IQSEIAKL HEVEE+AKQFPTIGFEKETMKYKN
Sbjct: 466 SEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 518


>ref|XP_002866922.1| hypothetical protein ARALYDRAFT_490821 [Arabidopsis lyrata subsp.
           lyrata] gi|297312758|gb|EFH43181.1| hypothetical protein
           ARALYDRAFT_490821 [Arabidopsis lyrata subsp. lyrata]
          Length = 517

 Score =  196 bits (498), Expect = 2e-48
 Identities = 97/113 (85%), Positives = 107/113 (94%)
 Frame = +3

Query: 3   LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDSAVNLALKIK 182
           LE+VHIA+NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA++FD AV LALK+K
Sbjct: 405 LEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTLALKVK 464

Query: 183 SETKGTKLKDFLTAMQSSVPIQSEIAKLCHEVEEYAKQFPTIGFEKETMKYKN 341
           SE +GTKLKDF++AM+SS  IQSEIAKL HEVEE+AKQFPTIGFEKETMKYKN
Sbjct: 465 SEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517


>ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
           [Vitis vinifera] gi|297736687|emb|CBI25704.3| unnamed
           protein product [Vitis vinifera]
          Length = 518

 Score =  196 bits (498), Expect = 2e-48
 Identities = 98/113 (86%), Positives = 105/113 (92%)
 Frame = +3

Query: 3   LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDSAVNLALKIK 182
           LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA++FD+AV +A+KIK
Sbjct: 406 LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVTVAVKIK 465

Query: 183 SETKGTKLKDFLTAMQSSVPIQSEIAKLCHEVEEYAKQFPTIGFEKETMKYKN 341
           +ET GTKLKDFL  MQSS  +QSEIAKL HEVEEYAKQFPTIGFEKETMKYKN
Sbjct: 466 AETTGTKLKDFLATMQSSPHLQSEIAKLRHEVEEYAKQFPTIGFEKETMKYKN 518


>sp|P50433.1|GLYM_SOLTU RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
           Short=SHMT; AltName: Full=Glycine
           hydroxymethyltransferase; AltName: Full=Serine
           methylase; Flags: Precursor gi|438247|emb|CAA81082.1|
           glycine hydroxymethyltransferase [Solanum tuberosum]
          Length = 518

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/113 (83%), Positives = 107/113 (94%)
 Frame = +3

Query: 3   LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDSAVNLALKIK 182
           LE+VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVADFFD+AV +A+K+K
Sbjct: 406 LEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVK 465

Query: 183 SETKGTKLKDFLTAMQSSVPIQSEIAKLCHEVEEYAKQFPTIGFEKETMKYKN 341
           +ET+GTKLKDF+  ++SS PI+SEIAKL H+VEEYAKQFPTIGFEKETMKYKN
Sbjct: 466 AETQGTKLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 518


>gb|AAL06913.1| AT4g37930/F20D10_50 [Arabidopsis thaliana]
          Length = 517

 Score =  195 bits (496), Expect = 3e-48
 Identities = 96/113 (84%), Positives = 107/113 (94%)
 Frame = +3

Query: 3   LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDSAVNLALKIK 182
           LE+VHIA+NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA++FD AV +ALK+K
Sbjct: 405 LEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVK 464

Query: 183 SETKGTKLKDFLTAMQSSVPIQSEIAKLCHEVEEYAKQFPTIGFEKETMKYKN 341
           SE +GTKLKDF++AM+SS  IQSEIAKL HEVEE+AKQFPTIGFEKETMKYKN
Sbjct: 465 SEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517


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