BLASTX nr result

ID: Panax21_contig00011533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011533
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39588.3| unnamed protein product [Vitis vinifera]              289   4e-76
ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-li...   289   4e-76
emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]   288   7e-76
ref|XP_004168863.1| PREDICTED: peptide chain release factor 2-li...   277   2e-72
ref|XP_004135582.1| PREDICTED: peptide chain release factor 2-li...   277   2e-72

>emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  289 bits (740), Expect = 4e-76
 Identities = 150/212 (70%), Positives = 164/212 (77%), Gaps = 3/212 (1%)
 Frame = +1

Query: 133 FTSKTHNSQSGCDSFWKYSSN---VRLFGSQAAIEPSTSDGLTVEGIIAKQWTIFDESES 303
           F+S    +      F + S N   VR FGSQAA E STSDGLTVEGIIA QW I DESES
Sbjct: 42  FSSVMMETSINPSGFHQVSGNSRWVRQFGSQAAAEASTSDGLTVEGIIANQWPILDESES 101

Query: 304 DWKSHASSIAQSIHLIKKRLNWKKLEVRLGLLSAQLNKPDLWDDPVHAGKISREHGSLIG 483
           DWKSHA++IA SIHLIKKRL WKKL VRL +LSAQLNKPDLWD+PVHAGKISREHG L+G
Sbjct: 102 DWKSHAAAIALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMG 161

Query: 484 KVKEVKAFEQELLEHIDMIKLARXXXXXXXXXXXXKALLIMRRSIKEKELEALLVGEHDS 663
           K+K VK  EQELLEHIDM+KLAR            KALL MRR+ KEKELEALL G+HDS
Sbjct: 162 KMKGVKNLEQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDS 221

Query: 664 CSCFIEIHAGAGGTESNDWAAMVMQMYKMWGQ 759
           CSC+IE+ AGAGGTES DWAAMVMQMYKMW Q
Sbjct: 222 CSCYIEVQAGAGGTESMDWAAMVMQMYKMWAQ 253


>ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 434

 Score =  289 bits (740), Expect = 4e-76
 Identities = 150/212 (70%), Positives = 164/212 (77%), Gaps = 3/212 (1%)
 Frame = +1

Query: 133 FTSKTHNSQSGCDSFWKYSSN---VRLFGSQAAIEPSTSDGLTVEGIIAKQWTIFDESES 303
           F+S    +      F + S N   VR FGSQAA E STSDGLTVEGIIA QW I DESES
Sbjct: 4   FSSVMMETSINPSGFHQVSGNSRWVRQFGSQAAAEASTSDGLTVEGIIANQWPILDESES 63

Query: 304 DWKSHASSIAQSIHLIKKRLNWKKLEVRLGLLSAQLNKPDLWDDPVHAGKISREHGSLIG 483
           DWKSHA++IA SIHLIKKRL WKKL VRL +LSAQLNKPDLWD+PVHAGKISREHG L+G
Sbjct: 64  DWKSHAAAIALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMG 123

Query: 484 KVKEVKAFEQELLEHIDMIKLARXXXXXXXXXXXXKALLIMRRSIKEKELEALLVGEHDS 663
           K+K VK  EQELLEHIDM+KLAR            KALL MRR+ KEKELEALL G+HDS
Sbjct: 124 KMKGVKNLEQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDS 183

Query: 664 CSCFIEIHAGAGGTESNDWAAMVMQMYKMWGQ 759
           CSC+IE+ AGAGGTES DWAAMVMQMYKMW Q
Sbjct: 184 CSCYIEVQAGAGGTESMDWAAMVMQMYKMWAQ 215


>emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  288 bits (738), Expect = 7e-76
 Identities = 145/188 (77%), Positives = 156/188 (82%)
 Frame = +1

Query: 196 VRLFGSQAAIEPSTSDGLTVEGIIAKQWTIFDESESDWKSHASSIAQSIHLIKKRLNWKK 375
           VR FGSQAA E STSDGLTVEGIIA QW I DESESDWKSHA++IA SIHLIKKRL WKK
Sbjct: 20  VRQFGSQAAAEASTSDGLTVEGIIANQWPILDESESDWKSHAAAIALSIHLIKKRLQWKK 79

Query: 376 LEVRLGLLSAQLNKPDLWDDPVHAGKISREHGSLIGKVKEVKAFEQELLEHIDMIKLARX 555
           L VRL +LSAQLNKPDLWD+PVHAGKISREHG L+GK+K VK  EQELLEHIDM+KLAR 
Sbjct: 80  LVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLEHIDMVKLARE 139

Query: 556 XXXXXXXXXXXKALLIMRRSIKEKELEALLVGEHDSCSCFIEIHAGAGGTESNDWAAMVM 735
                      KALL MRR+ KEKELEALL G+HDSCSC+IE+ AGAGGTES DWAAMVM
Sbjct: 140 ENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDWAAMVM 199

Query: 736 QMYKMWGQ 759
           QMYKMW Q
Sbjct: 200 QMYKMWAQ 207


>ref|XP_004168863.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
          Length = 472

 Score =  277 bits (709), Expect = 2e-72
 Identities = 134/190 (70%), Positives = 155/190 (81%)
 Frame = +1

Query: 190 SNVRLFGSQAAIEPSTSDGLTVEGIIAKQWTIFDESESDWKSHASSIAQSIHLIKKRLNW 369
           + +RLF +Q A EPSTSDGLTVEGI+  +WTI DESESDW+SHA++IAQSIHLIKKRL W
Sbjct: 66  TTLRLFSTQIAFEPSTSDGLTVEGILGNRWTILDESESDWRSHAAAIAQSIHLIKKRLQW 125

Query: 370 KKLEVRLGLLSAQLNKPDLWDDPVHAGKISREHGSLIGKVKEVKAFEQELLEHIDMIKLA 549
           KKL +RL LLS +LNK DLWDDP HAGKISREHGS++ K+KE+ AFE+ELLEHIDMIKLA
Sbjct: 126 KKLMMRLELLSVELNKADLWDDPAHAGKISREHGSIMSKIKEINAFERELLEHIDMIKLA 185

Query: 550 RXXXXXXXXXXXXKALLIMRRSIKEKELEALLVGEHDSCSCFIEIHAGAGGTESNDWAAM 729
           R             ALL MRR+ +EKELEALL GE+DSCSC+IE+ AGAGGTES DWAAM
Sbjct: 186 REENDTELESESLNALLTMRRNSREKELEALLSGENDSCSCYIEVQAGAGGTESMDWAAM 245

Query: 730 VMQMYKMWGQ 759
           VMQMY +W Q
Sbjct: 246 VMQMYILWAQ 255


>ref|XP_004135582.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
          Length = 467

 Score =  277 bits (709), Expect = 2e-72
 Identities = 134/190 (70%), Positives = 155/190 (81%)
 Frame = +1

Query: 190 SNVRLFGSQAAIEPSTSDGLTVEGIIAKQWTIFDESESDWKSHASSIAQSIHLIKKRLNW 369
           + +RLF +Q A EPSTSDGLTVEGI+  +WTI DESESDW+SHA++IAQSIHLIKKRL W
Sbjct: 61  TTLRLFSTQIAFEPSTSDGLTVEGILGNRWTILDESESDWRSHAAAIAQSIHLIKKRLQW 120

Query: 370 KKLEVRLGLLSAQLNKPDLWDDPVHAGKISREHGSLIGKVKEVKAFEQELLEHIDMIKLA 549
           KKL +RL LLS +LNK DLWDDP HAGKISREHGS++ K+KE+ AFE+ELLEHIDMIKLA
Sbjct: 121 KKLMMRLELLSVELNKADLWDDPAHAGKISREHGSIMSKIKEINAFERELLEHIDMIKLA 180

Query: 550 RXXXXXXXXXXXXKALLIMRRSIKEKELEALLVGEHDSCSCFIEIHAGAGGTESNDWAAM 729
           R             ALL MRR+ +EKELEALL GE+DSCSC+IE+ AGAGGTES DWAAM
Sbjct: 181 REENDTELESESLNALLTMRRNSREKELEALLSGENDSCSCYIEVQAGAGGTESMDWAAM 240

Query: 730 VMQMYKMWGQ 759
           VMQMY +W Q
Sbjct: 241 VMQMYILWAQ 250


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