BLASTX nr result

ID: Panax21_contig00011519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011519
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24978.3| unnamed protein product [Vitis vinifera]              200   1e-88
ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing pro...   200   1e-88
emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]   198   2e-83
ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2...   182   5e-82
ref|XP_002517753.1| F-box and wd40 domain protein, putative [Ric...   180   1e-78

>emb|CBI24978.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  200 bits (508), Expect(2) = 1e-88
 Identities = 97/150 (64%), Positives = 117/150 (78%)
 Frame = -3

Query: 598 GISTLCFNSSSPLLFSGSTAGQASCWDLRTMRTLWQTRVSPNVIYSMHHLRNYTSTLVIG 419
           GI TLCFN  S L+FSGSTAG ASCWDLRTMR LW+ R+SPNVIYSM HL + T TLV G
Sbjct: 281 GIRTLCFNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNVIYSMQHLCSDTHTLVAG 340

Query: 418 GIDGVLRIVDQNTGEVLSSCILDKNSNESIRPEASNKVATRKKGRRISEDTRLDLMPKAF 239
           GIDGVLRI+DQNTG+V+S C++D +S      + ++ +  RKKGRRI+EDT +D +PK+ 
Sbjct: 341 GIDGVLRILDQNTGKVVSGCVMD-DSPAPTSSQKTDSIIERKKGRRITEDTLIDSIPKSS 399

Query: 238 RPSINCLAVGFQKVVTTHDDNYIRVWKFRK 149
           RP I CLAVG QKVVTTH+  YIR+WKF K
Sbjct: 400 RPPITCLAVGMQKVVTTHNGKYIRMWKFHK 429



 Score =  154 bits (388), Expect(2) = 1e-88
 Identities = 72/115 (62%), Positives = 85/115 (73%)
 Frame = -2

Query: 1004 IDFDFDESKVVGLVGTRICIWRRNGKRNIFSSREGEISKGSCMCYVDPEAVIGCEDGRAR 825
            +DFDFDE+K+VGL+GTRIC WRRNGKR+IF SREG   KG CM Y+DPEAV+GCEDG AR
Sbjct: 161  VDFDFDENKIVGLIGTRICTWRRNGKRSIFPSREGTFMKGLCMRYIDPEAVVGCEDGTAR 220

Query: 824  FFDMYSRKWSKIVKIHDGPVTCLSLSDDQIIAGXXXXXXXXXXXXXXDQRVATLR 660
             FDMYSRK S+I+++H GPV CL+LSDDQ I                DQR+A LR
Sbjct: 221  VFDMYSRKCSRIIRMHSGPVRCLALSDDQCIISGSSLGSITISGLSSDQRIAKLR 275


>ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Vitis vinifera]
          Length = 421

 Score =  200 bits (508), Expect(2) = 1e-88
 Identities = 97/150 (64%), Positives = 117/150 (78%)
 Frame = -3

Query: 598 GISTLCFNSSSPLLFSGSTAGQASCWDLRTMRTLWQTRVSPNVIYSMHHLRNYTSTLVIG 419
           GI TLCFN  S L+FSGSTAG ASCWDLRTMR LW+ R+SPNVIYSM HL + T TLV G
Sbjct: 267 GIRTLCFNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNVIYSMQHLCSDTHTLVAG 326

Query: 418 GIDGVLRIVDQNTGEVLSSCILDKNSNESIRPEASNKVATRKKGRRISEDTRLDLMPKAF 239
           GIDGVLRI+DQNTG+V+S C++D +S      + ++ +  RKKGRRI+EDT +D +PK+ 
Sbjct: 327 GIDGVLRILDQNTGKVVSGCVMD-DSPAPTSSQKTDSIIERKKGRRITEDTLIDSIPKSS 385

Query: 238 RPSINCLAVGFQKVVTTHDDNYIRVWKFRK 149
           RP I CLAVG QKVVTTH+  YIR+WKF K
Sbjct: 386 RPPITCLAVGMQKVVTTHNGKYIRMWKFHK 415



 Score =  154 bits (388), Expect(2) = 1e-88
 Identities = 72/115 (62%), Positives = 85/115 (73%)
 Frame = -2

Query: 1004 IDFDFDESKVVGLVGTRICIWRRNGKRNIFSSREGEISKGSCMCYVDPEAVIGCEDGRAR 825
            +DFDFDE+K+VGL+GTRIC WRRNGKR+IF SREG   KG CM Y+DPEAV+GCEDG AR
Sbjct: 146  VDFDFDENKIVGLIGTRICTWRRNGKRSIFPSREGTFMKGLCMRYIDPEAVVGCEDGTAR 205

Query: 824  FFDMYSRKWSKIVKIHDGPVTCLSLSDDQIIAGXXXXXXXXXXXXXXDQRVATLR 660
             FDMYSRK S+I+++H GPV CL+LSDDQ I                DQR+A LR
Sbjct: 206  VFDMYSRKCSRIIRMHSGPVRCLALSDDQCIISGSSLGSITISGLSSDQRIAKLR 260


>emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]
          Length = 471

 Score =  198 bits (503), Expect(2) = 2e-83
 Identities = 96/150 (64%), Positives = 116/150 (77%)
 Frame = -3

Query: 598 GISTLCFNSSSPLLFSGSTAGQASCWDLRTMRTLWQTRVSPNVIYSMHHLRNYTSTLVIG 419
           GI TLCFN  S L+FSGSTAG ASCWDLRTMR LW+ R+SPN IYSM HL + T TLV G
Sbjct: 317 GIRTLCFNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNXIYSMQHLCSDTHTLVAG 376

Query: 418 GIDGVLRIVDQNTGEVLSSCILDKNSNESIRPEASNKVATRKKGRRISEDTRLDLMPKAF 239
           GIDGVLRI+DQNTG+V+S C++D +S      + ++ +  RKKGRRI+EDT +D +PK+ 
Sbjct: 377 GIDGVLRILDQNTGKVVSGCVMD-DSPAPTSSQKTDSIIERKKGRRITEDTLIDSIPKSS 435

Query: 238 RPSINCLAVGFQKVVTTHDDNYIRVWKFRK 149
           RP I CLAVG QKVVTTH+  YIR+WKF K
Sbjct: 436 RPPITCLAVGMQKVVTTHNGKYIRMWKFHK 465



 Score =  138 bits (348), Expect(2) = 2e-83
 Identities = 72/150 (48%), Positives = 85/150 (56%), Gaps = 35/150 (23%)
 Frame = -2

Query: 1004 IDFDFDESKVVGLVGTRICIWRRNGKRNIFSSREGEISKGSCM----------------- 876
            +DFDFDE+K+VGL+GTRIC WRRNGKR+IF S EG   KG CM                 
Sbjct: 161  VDFDFDENKIVGLIGTRICXWRRNGKRSIFPSXEGTFMKGLCMRNAVVXSVSENGVWSLG 220

Query: 875  ------------------CYVDPEAVIGCEDGRARFFDMYSRKWSKIVKIHDGPVTCLSL 750
                              CY+DPEAV+GCEDG AR FDMYSRK S+I+++H GPV CL+L
Sbjct: 221  EWEGHTVLGSCIEMVVVRCYIDPEAVVGCEDGTARVFDMYSRKCSRIIRMHSGPVRCLAL 280

Query: 749  SDDQIIAGXXXXXXXXXXXXXXDQRVATLR 660
            SDDQ I                DQR+A LR
Sbjct: 281  SDDQCIISGSSLGSITISGLSSDQRIAKLR 310


>ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  182 bits (461), Expect(2) = 5e-82
 Identities = 88/148 (59%), Positives = 113/148 (76%)
 Frame = -3

Query: 598 GISTLCFNSSSPLLFSGSTAGQASCWDLRTMRTLWQTRVSPNVIYSMHHLRNYTSTLVIG 419
           GI +LCFN  S  +F+G+TAG ASCWDLRTMR LW+TRVSPNV+YS+ H+R+ TSTLV+G
Sbjct: 292 GIKSLCFNPVSHQVFAGTTAGYASCWDLRTMRQLWKTRVSPNVVYSLQHMRSDTSTLVVG 351

Query: 418 GIDGVLRIVDQNTGEVLSSCILDKNSNESIRPEASNKVATRKKGRRISEDTRLDLMPKAF 239
           GIDGVLR++DQNTGEVLSS ++D  ++ S     ++ V  RK G+R+  D  +D +PK  
Sbjct: 352 GIDGVLRVLDQNTGEVLSSYVMDHGTSTS--SGYTHGVIERKIGKRLPYDYNIDRIPKTV 409

Query: 238 RPSINCLAVGFQKVVTTHDDNYIRVWKF 155
           RP I CLAVG QKV+TTH+   IR+WKF
Sbjct: 410 RPPITCLAVGMQKVITTHNIKNIRMWKF 437



 Score =  150 bits (378), Expect(2) = 5e-82
 Identities = 77/128 (60%), Positives = 89/128 (69%), Gaps = 13/128 (10%)
 Frame = -2

Query: 1004 IDFDFDESK-------------VVGLVGTRICIWRRNGKRNIFSSREGEISKGSCMCYVD 864
            +DFDFDESK             +VGLVGTRICIWRRNG+R+IF SREG+  KGSCM Y D
Sbjct: 159  VDFDFDESKAVVPYIDIVHRIVIVGLVGTRICIWRRNGQRSIFPSREGQFMKGSCMRYFD 218

Query: 863  PEAVIGCEDGRARFFDMYSRKWSKIVKIHDGPVTCLSLSDDQIIAGXXXXXXXXXXXXXX 684
            PEAV+GCEDG AR FDMYS+K S+IV++H  PVTCLSLS+DQ+I                
Sbjct: 219  PEAVVGCEDGTARVFDMYSKKCSRIVRMHTEPVTCLSLSEDQLIISGSSLGRITISGLSS 278

Query: 683  DQRVATLR 660
            DQRVATLR
Sbjct: 279  DQRVATLR 286


>ref|XP_002517753.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223543025|gb|EEF44560.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 336

 Score =  180 bits (457), Expect(2) = 1e-78
 Identities = 85/150 (56%), Positives = 113/150 (75%)
 Frame = -3

Query: 598 GISTLCFNSSSPLLFSGSTAGQASCWDLRTMRTLWQTRVSPNVIYSMHHLRNYTSTLVIG 419
           GI TLCFN  S ++FSG+ AG  SCWDLR MR +W+TRVSPNV+YS+ HL N  S+LV+G
Sbjct: 188 GIKTLCFNPRSHMVFSGTAAGYTSCWDLRMMRRVWETRVSPNVVYSLQHLSNDKSSLVVG 247

Query: 418 GIDGVLRIVDQNTGEVLSSCILDKNSNESIRPEASNKVATRKKGRRISEDTRLDLMPKAF 239
           GIDGVLRI+DQN+G +LSS ++D ++  S     S+    R+KG+ +  +T +D +P++ 
Sbjct: 248 GIDGVLRILDQNSGIILSSYVIDHDAGSS-SSGYSHGTIERRKGKSLPSETIIDQIPRSS 306

Query: 238 RPSINCLAVGFQKVVTTHDDNYIRVWKFRK 149
           RPSI CLAVG +KVVTTH+  YIRVWKF+K
Sbjct: 307 RPSITCLAVGMKKVVTTHNSKYIRVWKFKK 336



 Score =  140 bits (353), Expect(2) = 1e-78
 Identities = 65/115 (56%), Positives = 82/115 (71%)
 Frame = -2

Query: 1004 IDFDFDESKVVGLVGTRICIWRRNGKRNIFSSREGEISKGSCMCYVDPEAVIGCEDGRAR 825
            +DFDFDESK+VGL+GT++C+WRRNG  + F  R G   KG CM Y+DPEAV+GCEDG AR
Sbjct: 68   VDFDFDESKIVGLIGTQVCLWRRNGPMSTFPPRGGTYMKGLCMRYLDPEAVVGCEDGTAR 127

Query: 824  FFDMYSRKWSKIVKIHDGPVTCLSLSDDQIIAGXXXXXXXXXXXXXXDQRVATLR 660
             FD+YS+K SKI+++H  PVTCLSL D+QII G              DQ +ATL+
Sbjct: 128  IFDLYSKKCSKIIRMHPEPVTCLSLGDEQIILGGSSLGRITVSDYSSDQCIATLK 182


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