BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011505
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602047.1| Replication factor C subunit [Medicago trunc...   105   1e-20
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V...   105   2e-20
ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 is...   105   2e-20
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   105   2e-20
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   105   2e-20

>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
            gi|357520353|ref|XP_003630465.1| Replication factor C
            subunit [Medicago truncatula] gi|217073528|gb|ACJ85124.1|
            unknown [Medicago truncatula] gi|355491095|gb|AES72298.1|
            Replication factor C subunit [Medicago truncatula]
            gi|355524487|gb|AET04941.1| Replication factor C subunit
            [Medicago truncatula] gi|388492316|gb|AFK34224.1| unknown
            [Medicago truncatula]
          Length = 339

 Score =  105 bits (263), Expect = 1e-20
 Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 6/97 (6%)
 Frame = -2

Query: 1065 VIPQEVVQALYSACKSGNFELADKEVNNVTAEGYPVSQMIFQMFNLVVEAEDVSDEQKAR 886
            ++P EVV+AL  AC+SGNF+LA+KEVNN  AEGYPVSQM+ Q+F  +VE  D+SDEQKAR
Sbjct: 239  IVPAEVVEALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKAR 298

Query: 885  IFKKLGEADKVTI------LFNLKINSISTLQ*LCSL 793
            I KKLGEADK  +      L  L + S +T+Q LC++
Sbjct: 299  ISKKLGEADKCLVDGADEYLQLLDVVS-NTIQALCNM 334


>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
          Length = 334

 Score =  105 bits (262), Expect = 2e-20
 Identities = 51/73 (69%), Positives = 65/73 (89%)
 Frame = -2

Query: 1065 VIPQEVVQALYSACKSGNFELADKEVNNVTAEGYPVSQMIFQMFNLVVEAEDVSDEQKAR 886
            V+PQ VVQAL++ACKSG+F+ A+KEVNNV AEGYPVSQM++Q+F++VVEA D+SDEQKAR
Sbjct: 232  VVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKAR 290

Query: 885  IFKKLGEADKVTI 847
            I K+L EADK  +
Sbjct: 291  ICKRLAEADKCLV 303


>ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis vinifera]
          Length = 329

 Score =  105 bits (262), Expect = 2e-20
 Identities = 51/73 (69%), Positives = 65/73 (89%)
 Frame = -2

Query: 1065 VIPQEVVQALYSACKSGNFELADKEVNNVTAEGYPVSQMIFQMFNLVVEAEDVSDEQKAR 886
            V+PQ VVQAL++ACKSG+F+ A+KEVNNV AEGYPVSQM++Q+F++VVEA D+SDEQKAR
Sbjct: 227  VVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKAR 285

Query: 885  IFKKLGEADKVTI 847
            I K+L EADK  +
Sbjct: 286  ICKRLAEADKCLV 298


>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis vinifera]
            gi|302141781|emb|CBI18984.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  105 bits (262), Expect = 2e-20
 Identities = 51/73 (69%), Positives = 65/73 (89%)
 Frame = -2

Query: 1065 VIPQEVVQALYSACKSGNFELADKEVNNVTAEGYPVSQMIFQMFNLVVEAEDVSDEQKAR 886
            V+PQ VVQAL++ACKSG+F+ A+KEVNNV AEGYPVSQM++Q+F++VVEA D+SDEQKAR
Sbjct: 239  VVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKAR 297

Query: 885  IFKKLGEADKVTI 847
            I K+L EADK  +
Sbjct: 298  ICKRLAEADKCLV 310


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  105 bits (262), Expect = 2e-20
 Identities = 51/73 (69%), Positives = 65/73 (89%)
 Frame = -2

Query: 1065 VIPQEVVQALYSACKSGNFELADKEVNNVTAEGYPVSQMIFQMFNLVVEAEDVSDEQKAR 886
            V+PQ VVQAL++ACKSG+F+ A+KEVNNV AEGYPVSQM++Q+F++VVEA D+SDEQKAR
Sbjct: 239  VVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKAR 297

Query: 885  IFKKLGEADKVTI 847
            I K+L EADK  +
Sbjct: 298  ICKRLAEADKCLV 310