BLASTX nr result

ID: Panax21_contig00011494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011494
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249...   147   9e-34
ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cuc...   145   3e-33
ref|XP_002520601.1| RNA binding protein, putative [Ricinus commu...   144   1e-32
ref|XP_002315063.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|2...   141   7e-32

>ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249627 [Vitis vinifera]
           gi|297738257|emb|CBI27458.3| unnamed protein product
           [Vitis vinifera]
          Length = 414

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/76 (89%), Positives = 72/76 (94%)
 Frame = -1

Query: 230 MASYSGKGTPSNGSVYVCNLPPGTDDNMLADYFGTIGLIKKDKRTGRPKIWLYRDKVTNE 51
           MA+YSG G PSNGSVYVCNLP GTD+ MLA+YFGTIGLIKKDKRTGRPKIWLYRDKVTNE
Sbjct: 1   MANYSGTGAPSNGSVYVCNLPHGTDETMLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNE 60

Query: 50  PKGDATVTYEDPYAAL 3
           PKGDATVTYEDP+AAL
Sbjct: 61  PKGDATVTYEDPHAAL 76


>ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cucumis sativus]
          Length = 396

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/76 (85%), Positives = 72/76 (94%)
 Frame = -1

Query: 230 MASYSGKGTPSNGSVYVCNLPPGTDDNMLADYFGTIGLIKKDKRTGRPKIWLYRDKVTNE 51
           MASY GKG PSNGS+Y+CNLP GTD+NMLA+YFGTIG++KKDKRTGRPKIWLYRDK TNE
Sbjct: 1   MASYVGKGAPSNGSIYICNLPYGTDENMLAEYFGTIGVLKKDKRTGRPKIWLYRDKSTNE 60

Query: 50  PKGDATVTYEDPYAAL 3
           PKGDATVTYEDP+AAL
Sbjct: 61  PKGDATVTYEDPHAAL 76


>ref|XP_002520601.1| RNA binding protein, putative [Ricinus communis]
           gi|223540200|gb|EEF41774.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 483

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/75 (86%), Positives = 72/75 (96%)
 Frame = -1

Query: 230 MASYSGKGTPSNGSVYVCNLPPGTDDNMLADYFGTIGLIKKDKRTGRPKIWLYRDKVTNE 51
           MASYSGKG  +NGSVYVCNLP GTD++MLA+YFGTIGL+KKDKRTGRPKIWLYRDK+TNE
Sbjct: 2   MASYSGKGASANGSVYVCNLPQGTDEDMLAEYFGTIGLLKKDKRTGRPKIWLYRDKLTNE 61

Query: 50  PKGDATVTYEDPYAA 6
           PKGDATVTYEDP+AA
Sbjct: 62  PKGDATVTYEDPHAA 76


>ref|XP_002315063.1| predicted protein [Populus trichocarpa] gi|222864103|gb|EEF01234.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/76 (84%), Positives = 73/76 (96%)
 Frame = -1

Query: 230 MASYSGKGTPSNGSVYVCNLPPGTDDNMLADYFGTIGLIKKDKRTGRPKIWLYRDKVTNE 51
           MASY+GKG PSNG++YV NLP GTDD+MLA++FGTIGL+KKDKRTGRPKIWLYRDK+TNE
Sbjct: 1   MASYTGKGAPSNGTIYVSNLPEGTDDSMLAEHFGTIGLLKKDKRTGRPKIWLYRDKMTNE 60

Query: 50  PKGDATVTYEDPYAAL 3
           PKGDATVTYEDP+AAL
Sbjct: 61  PKGDATVTYEDPHAAL 76


>ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|222851116|gb|EEE88663.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  141 bits (355), Expect = 7e-32
 Identities = 64/76 (84%), Positives = 71/76 (93%)
 Frame = -1

Query: 230 MASYSGKGTPSNGSVYVCNLPPGTDDNMLADYFGTIGLIKKDKRTGRPKIWLYRDKVTNE 51
           MASY+GKG PSNG++Y+ NLP GTDD MLA YFGTIGL+KKDKRTGRPKIWLYRDK+TNE
Sbjct: 1   MASYAGKGDPSNGTIYISNLPEGTDDIMLAGYFGTIGLLKKDKRTGRPKIWLYRDKMTNE 60

Query: 50  PKGDATVTYEDPYAAL 3
           PKGDATVTYEDP+AAL
Sbjct: 61  PKGDATVTYEDPHAAL 76


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