BLASTX nr result
ID: Panax21_contig00011493
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00011493
(797 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520601.1| RNA binding protein, putative [Ricinus commu... 216 4e-81
ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249... 216 4e-81
ref|NP_001241952.1| uncharacterized protein LOC100780819 [Glycin... 214 4e-80
ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|2... 200 1e-76
ref|XP_002315063.1| predicted protein [Populus trichocarpa] gi|2... 201 1e-75
>ref|XP_002520601.1| RNA binding protein, putative [Ricinus communis]
gi|223540200|gb|EEF41774.1| RNA binding protein,
putative [Ricinus communis]
Length = 483
Score = 216 bits (549), Expect(3) = 4e-81
Identities = 104/149 (69%), Positives = 122/149 (81%), Gaps = 1/149 (0%)
Frame = -1
Query: 797 SVYVCNLPPGTDDNMLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNEPKGDATVTYEDPY 618
SVYVCNLP GTD++MLAEYFGTIGL+KKDKRTGRPKIWLYRDK+TNEPKGDATVTYEDP+
Sbjct: 15 SVYVCNLPQGTDEDMLAEYFGTIGLLKKDKRTGRPKIWLYRDKLTNEPKGDATVTYEDPH 74
Query: 617 AALAAVEWFNNKEFHGATIRVFIAESK-KDGNSYNSGIPVEEPSLIGDLGGLEDTVNDRN 441
AA AA+EWFNNK+FHG I VF+AESK KD ++YNS + +P+ +GD GGLE+T D N
Sbjct: 75 AAQAAIEWFNNKDFHGNLIGVFMAESKNKDEHAYNSEV---DPNAVGDFGGLEETAGDMN 131
Query: 440 XXXXXXXXXGEIPSGKAWQQDGDWMCPNT 354
G+ SGKAWQQ+GDW+CPNT
Sbjct: 132 DDGGRGRGKGD-ASGKAWQQEGDWLCPNT 159
Score = 95.1 bits (235), Expect(3) = 4e-81
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -2
Query: 133 LFGPNDWSCPMCGNLNWAKRNKCNICNTNKPGVSEGGVRGGRAG 2
LFGPNDW CPMCGN+NWAKR KCNICNTNKPG +EGGVRGGR G
Sbjct: 214 LFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGG 257
Score = 38.9 bits (89), Expect(3) = 4e-81
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 273 CSNVNFAFRGVCNRC 229
CSNVNFAFRGVCNRC
Sbjct: 161 CSNVNFAFRGVCNRC 175
>ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249627 [Vitis vinifera]
gi|297738257|emb|CBI27458.3| unnamed protein product
[Vitis vinifera]
Length = 414
Score = 216 bits (549), Expect(3) = 4e-81
Identities = 110/152 (72%), Positives = 120/152 (78%), Gaps = 4/152 (2%)
Frame = -1
Query: 797 SVYVCNLPPGTDDNMLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNEPKGDATVTYEDPY 618
SVYVCNLP GTD+ MLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNEPKGDATVTYEDP+
Sbjct: 14 SVYVCNLPHGTDETMLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNEPKGDATVTYEDPH 73
Query: 617 AALAAVEWFNNKEFHGATIRVFIAESK-KDGNSYNSGIPVE---EPSLIGDLGGLEDTVN 450
AALAAVEWFNNK+FHG+ I VFIAESK KD +SYNSG V +P DL GLE+
Sbjct: 74 AALAAVEWFNNKDFHGSIIGVFIAESKNKDDHSYNSGNQVNDVGDPGAASDLRGLEEDPL 133
Query: 449 DRNXXXXXXXXXGEIPSGKAWQQDGDWMCPNT 354
D N G+ +GKAWQQDGDW+CPNT
Sbjct: 134 DMNGSAGRGRGRGD-AAGKAWQQDGDWLCPNT 164
Score = 95.1 bits (235), Expect(3) = 4e-81
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -2
Query: 133 LFGPNDWSCPMCGNLNWAKRNKCNICNTNKPGVSEGGVRGGRAG 2
LFGPNDW CPMCGN+NWAKR KCNICNTNKPG +EGGVRGGR G
Sbjct: 220 LFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGG 263
Score = 38.9 bits (89), Expect(3) = 4e-81
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 273 CSNVNFAFRGVCNRC 229
CSNVNFAFRGVCNRC
Sbjct: 166 CSNVNFAFRGVCNRC 180
>ref|NP_001241952.1| uncharacterized protein LOC100780819 [Glycine max]
gi|255646988|gb|ACU23963.1| unknown [Glycine max]
Length = 365
Score = 214 bits (544), Expect(3) = 4e-80
Identities = 106/149 (71%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
Frame = -1
Query: 797 SVYVCNLPPGTDDNMLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNEPKGDATVTYEDPY 618
S YVCNLP GTDDNMLAEYFGTIGLIKKDKRTGRPKIWLYRDK TNEPKGDATVTYEDP+
Sbjct: 14 SAYVCNLPYGTDDNMLAEYFGTIGLIKKDKRTGRPKIWLYRDKETNEPKGDATVTYEDPH 73
Query: 617 AALAAVEWFNNKEFHGATIRVFIAESK-KDGNSYNSGIPVEEPSLIGDLGGLEDTVNDRN 441
AA+AAVEWFNNK+FHG TI VFIAESK KD +YN+ + EP + ++GGLE+T D N
Sbjct: 74 AAVAAVEWFNNKDFHGNTIGVFIAESKNKDDQAYNAAV---EPGVTDNVGGLEETTKDVN 130
Query: 440 XXXXXXXXXGEIPSGKAWQQDGDWMCPNT 354
+ SGKAWQQDGDW+C NT
Sbjct: 131 GGSGRGRGQND-TSGKAWQQDGDWLCLNT 158
Score = 95.1 bits (235), Expect(3) = 4e-80
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -2
Query: 133 LFGPNDWSCPMCGNLNWAKRNKCNICNTNKPGVSEGGVRGGRAG 2
LFGPNDW CPMCGN+NWAKR KCNICNTNKPG +EGGVRGGR G
Sbjct: 211 LFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGG 254
Score = 37.4 bits (85), Expect(3) = 4e-80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -3
Query: 273 CSNVNFAFRGVCNRC 229
CSNVNFAFRG CNRC
Sbjct: 160 CSNVNFAFRGACNRC 174
>ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|222851116|gb|EEE88663.1|
predicted protein [Populus trichocarpa]
Length = 380
Score = 200 bits (508), Expect(3) = 1e-76
Identities = 100/149 (67%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
Frame = -1
Query: 797 SVYVCNLPPGTDDNMLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNEPKGDATVTYEDPY 618
++Y+ NLP GTDD MLA YFGTIGL+KKDKRTGRPKIWLYRDK+TNEPKGDATVTYEDP+
Sbjct: 14 TIYISNLPEGTDDIMLAGYFGTIGLLKKDKRTGRPKIWLYRDKMTNEPKGDATVTYEDPH 73
Query: 617 AALAAVEWFNNKEFHGATIRVFIAESK-KDGNSYNSGIPVEEPSLIGDLGGLEDTVNDRN 441
AALAAVEWFNNK+FHG I VFIA+SK KD YNS V++P+ D GG E+ D N
Sbjct: 74 AALAAVEWFNNKDFHGNIIGVFIAQSKSKDDTVYNS---VDDPN---DFGGFEENAKDLN 127
Query: 440 XXXXXXXXXGEIPSGKAWQQDGDWMCPNT 354
+ SGKAWQQDGDW+CPNT
Sbjct: 128 EGGGRGRGQDD-ASGKAWQQDGDWLCPNT 155
Score = 95.9 bits (237), Expect(3) = 1e-76
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = -2
Query: 133 LFGPNDWSCPMCGNLNWAKRNKCNICNTNKPGVSEGGVRGGRAG 2
LFGPNDW+CPMCGN+NWAKR+KCN+CNTNKPG +EGGVRGGR G
Sbjct: 211 LFGPNDWTCPMCGNINWAKRSKCNVCNTNKPGHNEGGVRGGRGG 254
Score = 38.9 bits (89), Expect(3) = 1e-76
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3
Query: 273 CSNVNFAFRGVCNRC 229
CSNVNFAFRGVCNRC
Sbjct: 157 CSNVNFAFRGVCNRC 171
>ref|XP_002315063.1| predicted protein [Populus trichocarpa] gi|222864103|gb|EEF01234.1|
predicted protein [Populus trichocarpa]
Length = 387
Score = 201 bits (512), Expect(3) = 1e-75
Identities = 101/149 (67%), Positives = 119/149 (79%), Gaps = 1/149 (0%)
Frame = -1
Query: 797 SVYVCNLPPGTDDNMLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNEPKGDATVTYEDPY 618
++YV NLP GTDD+MLAE+FGTIGL+KKDKRTGRPKIWLYRDK+TNEPKGDATVTYEDP+
Sbjct: 14 TIYVSNLPEGTDDSMLAEHFGTIGLLKKDKRTGRPKIWLYRDKMTNEPKGDATVTYEDPH 73
Query: 617 AALAAVEWFNNKEFHGATIRVFIAESK-KDGNSYNSGIPVEEPSLIGDLGGLEDTVNDRN 441
AALAAVEWFNNK+FHG TI VFIA+SK KD ++N PV++P+ D G LE+ D N
Sbjct: 74 AALAAVEWFNNKDFHGNTIGVFIAQSKSKDDQAFN---PVDDPN---DSGVLEENAKDLN 127
Query: 440 XXXXXXXXXGEIPSGKAWQQDGDWMCPNT 354
G+ SGKAWQQ+GDW+CPNT
Sbjct: 128 EGGGRGRGRGD-ASGKAWQQEGDWLCPNT 155
Score = 93.6 bits (231), Expect(3) = 1e-75
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = -2
Query: 133 LFGPNDWSCPMCGNLNWAKRNKCNICNTNKPGVSEGGVRGGRAG 2
LFGPNDW CPMCGN+NWAKR KCNICNTNKPG +E GVRGGRAG
Sbjct: 211 LFGPNDWPCPMCGNINWAKRMKCNICNTNKPGHNEAGVRGGRAG 254
Score = 36.2 bits (82), Expect(3) = 1e-75
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -3
Query: 273 CSNVNFAFRGVCNRC 229
CSNVNFAFRGVCN C
Sbjct: 157 CSNVNFAFRGVCNLC 171