BLASTX nr result

ID: Panax21_contig00011488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011488
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB16981.1| unknown [Solanum tuberosum]                            310   2e-82
gb|ABB02636.1| RAD23-like [Solanum tuberosum]                         310   2e-82
gb|ACU18529.1| unknown [Glycine max]                                  307   2e-81
ref|XP_002516727.1| uv excision repair protein rad23, putative [...   307   2e-81
ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycin...   306   3e-81

>gb|ABB16981.1| unknown [Solanum tuberosum]
          Length = 382

 Score =  310 bits (794), Expect = 2e-82
 Identities = 164/222 (73%), Positives = 174/222 (78%)
 Frame = -3

Query: 667 VYGHAASNLVAGSNLESTIQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEX 488
           VYG AASNLVAGS LE+T+QQILDMGGGSW+RDTVVRALRAA+NNPERA+EYLYSGIPE 
Sbjct: 145 VYGQAASNLVAGSTLETTVQQILDMGGGSWERDTVVRALRAAYNNPERAIEYLYSGIPEQ 204

Query: 487 XXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXPNANPLDLFPQGLPNMGSNASAGNLDFLR 308
                                           NANPLDLFPQGLPN+GSN  AGNLDFL 
Sbjct: 205 AEIPPAAPASGQAVNPPVQASQPAVPSGGP--NANPLDLFPQGLPNVGSNVGAGNLDFLS 262

Query: 307 NSQQFQALRAMVQANPQILQPMLQELGKQNPNLVRLIQEHQADFLRLINEPVEVVEGEWN 128
           NS QFQALRAMVQANPQILQPMLQELGKQNP L+RLIQEHQADFLRLINEP   VEGE N
Sbjct: 263 NSPQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINEP---VEGEGN 319

Query: 127 ILGQPGGAVPQAVTVTPEEREAIERLEAMGFDRPTVLQVYFA 2
           + GQP GA+PQAVTVTPEEREAIERLEAMGFDR  VLQV+FA
Sbjct: 320 VPGQPAGAIPQAVTVTPEEREAIERLEAMGFDRALVLQVFFA 361


>gb|ABB02636.1| RAD23-like [Solanum tuberosum]
          Length = 384

 Score =  310 bits (794), Expect = 2e-82
 Identities = 164/222 (73%), Positives = 174/222 (78%)
 Frame = -3

Query: 667 VYGHAASNLVAGSNLESTIQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEX 488
           VYG AASNLVAGS LE+T+QQILDMGGGSW+RDTVVRALRAA+NNPERA+EYLYSGIPE 
Sbjct: 147 VYGQAASNLVAGSTLETTVQQILDMGGGSWERDTVVRALRAAYNNPERAIEYLYSGIPEQ 206

Query: 487 XXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXPNANPLDLFPQGLPNMGSNASAGNLDFLR 308
                                           NANPLDLFPQGLPN+GSN  AGNLDFL 
Sbjct: 207 AEIPPAAPVSGQAVNPPVQASPPAVPSGGP--NANPLDLFPQGLPNVGSNVGAGNLDFLS 264

Query: 307 NSQQFQALRAMVQANPQILQPMLQELGKQNPNLVRLIQEHQADFLRLINEPVEVVEGEWN 128
           NS QFQALRAMVQANPQILQPMLQELGKQNP L+RLIQEHQADFLRLINEP   VEGE N
Sbjct: 265 NSPQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINEP---VEGEGN 321

Query: 127 ILGQPGGAVPQAVTVTPEEREAIERLEAMGFDRPTVLQVYFA 2
           + GQP GA+PQAVTVTPEEREAIERLEAMGFDR  VLQV+FA
Sbjct: 322 VPGQPAGAIPQAVTVTPEEREAIERLEAMGFDRALVLQVFFA 363


>gb|ACU18529.1| unknown [Glycine max]
          Length = 382

 Score =  307 bits (786), Expect = 2e-81
 Identities = 168/227 (74%), Positives = 179/227 (78%), Gaps = 5/227 (2%)
 Frame = -3

Query: 667 VYGHAASNLVAGSNLESTIQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEX 488
           +YG AASNLVAGSNLE TIQQILDMGGGSWDRDTVVR LRAA+NNPERAVEYLYSGIPE 
Sbjct: 137 IYGQAASNLVAGSNLEGTIQQILDMGGGSWDRDTVVRTLRAAYNNPERAVEYLYSGIPEQ 196

Query: 487 XXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXP----NANPLDLFPQGLPNMGSNAS-AGN 323
                           +              P    NANPLDLFPQGLPN+GS A+ AG+
Sbjct: 197 AEALPVTGVPASAQPSNPPADTPQAAQPASVPSSGPNANPLDLFPQGLPNVGSGAAGAGS 256

Query: 322 LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPNLVRLIQEHQADFLRLINEPVEVV 143
           LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP+L+RLIQEHQ DFLRLINEPVE  
Sbjct: 257 LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVE-- 314

Query: 142 EGEWNILGQPGGAVPQAVTVTPEEREAIERLEAMGFDRPTVLQVYFA 2
            GE NILGQ  GA+PQAVTVTPEER+AIERLEAMGFDR TVL+VYFA
Sbjct: 315 GGEGNILGQLAGAMPQAVTVTPEERQAIERLEAMGFDRATVLEVYFA 361


>ref|XP_002516727.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223544100|gb|EEF45625.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 381

 Score =  307 bits (786), Expect = 2e-81
 Identities = 170/262 (64%), Positives = 185/262 (70%), Gaps = 1/262 (0%)
 Frame = -3

Query: 784 TTSTEPASTVQLPQSVXXXXXXXXXXXXXXXXXXXXXXDVYGHAASNLVAGSNLESTIQQ 605
           TT+  PA T +LPQS                        +YG AASNLVAGSNLE+T+QQ
Sbjct: 110 TTAQAPAVTAELPQSAAESTPVVNPVSSETD--------IYGQAASNLVAGSNLEATVQQ 161

Query: 604 ILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEXXXXXXXXXXXXXXXXXDXXXX 425
           ILDMGGGSWDR+TV RALRAAFNNPERAVEYLYSGIPE                      
Sbjct: 162 ILDMGGGSWDRETVARALRAAFNNPERAVEYLYSGIPEQPEVQPLPRAPSSGQAAIPSAT 221

Query: 424 XXXXXXXXXXP-NANPLDLFPQGLPNMGSNASAGNLDFLRNSQQFQALRAMVQANPQILQ 248
                       NANPLDLFPQGLP +GS  SAG LDFLRNSQQFQALRAMVQANPQILQ
Sbjct: 222 AQEPAAPTSGGANANPLDLFPQGLPTIGSTTSAGTLDFLRNSQQFQALRAMVQANPQILQ 281

Query: 247 PMLQELGKQNPNLVRLIQEHQADFLRLINEPVEVVEGEWNILGQPGGAVPQAVTVTPEER 68
           PMLQELGKQNP+L+RLIQEHQADFLRLINEP   VEG+ N+LGQ   AVPQ+V+VTPEER
Sbjct: 282 PMLQELGKQNPHLMRLIQEHQADFLRLINEP---VEGDGNLLGQLASAVPQSVSVTPEER 338

Query: 67  EAIERLEAMGFDRPTVLQVYFA 2
           EAIERLEAMGFDR  VL+V+FA
Sbjct: 339 EAIERLEAMGFDRAIVLEVFFA 360


>ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycine max]
           gi|255644546|gb|ACU22776.1| unknown [Glycine max]
          Length = 392

 Score =  306 bits (784), Expect = 3e-81
 Identities = 168/227 (74%), Positives = 179/227 (78%), Gaps = 5/227 (2%)
 Frame = -3

Query: 667 VYGHAASNLVAGSNLESTIQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEX 488
           +YG AASNLVAGSNLE TIQQILDMGGGSWDRDTVVRALRAA+NNPERAVEYLYSGIPE 
Sbjct: 147 IYGQAASNLVAGSNLEGTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQ 206

Query: 487 XXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXP----NANPLDLFPQGLPNMGSNAS-AGN 323
                           +              P    NANPLDLFPQGLPN+GS A+ AG+
Sbjct: 207 AEAPPVTREPASAQPANPPAAAPQAAQPASVPSSGPNANPLDLFPQGLPNVGSGAAGAGS 266

Query: 322 LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPNLVRLIQEHQADFLRLINEPVEVV 143
           LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP+L+RLIQEHQ DFLRLINEPVE  
Sbjct: 267 LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVE-- 324

Query: 142 EGEWNILGQPGGAVPQAVTVTPEEREAIERLEAMGFDRPTVLQVYFA 2
            GE NILGQ   A+PQAVTVTPEER+AIERLEAMGFDR TVL+VYFA
Sbjct: 325 GGEGNILGQLASAMPQAVTVTPEERQAIERLEAMGFDRATVLEVYFA 371


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