BLASTX nr result

ID: Panax21_contig00011485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011485
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304731.1| predicted protein [Populus trichocarpa] gi|2...   243   1e-62
ref|XP_002332053.1| predicted protein [Populus trichocarpa] gi|2...   241   3e-62
gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]                 241   3e-62
ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana] gi|33...   241   6e-62
ref|XP_002461243.1| hypothetical protein SORBIDRAFT_02g043460 [S...   240   1e-61

>ref|XP_002304731.1| predicted protein [Populus trichocarpa] gi|222842163|gb|EEE79710.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  243 bits (620), Expect = 1e-62
 Identities = 118/130 (90%), Positives = 126/130 (96%)
 Frame = -3

Query: 401 CFMIVSRNDIPIYEAQVGNAPKKEDASHQHQFILHAALDIVQDLAWTTSAMFLKAIDRFN 222
           CF+IVSRNDIPIYEA+VG+A K+EDA+  HQFILHAALDIVQDLAWTTSAM+LKAIDRFN
Sbjct: 6   CFIIVSRNDIPIYEAEVGSATKREDAAQMHQFILHAALDIVQDLAWTTSAMYLKAIDRFN 65

Query: 221 DLVVTVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDT 42
           D+VV+VYVTAGHTR MLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDT
Sbjct: 66  DMVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDT 125

Query: 41  KVRALARKYL 12
           KVRALARKYL
Sbjct: 126 KVRALARKYL 135


>ref|XP_002332053.1| predicted protein [Populus trichocarpa] gi|222831939|gb|EEE70416.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  241 bits (616), Expect = 3e-62
 Identities = 118/130 (90%), Positives = 126/130 (96%)
 Frame = -3

Query: 401 CFMIVSRNDIPIYEAQVGNAPKKEDASHQHQFILHAALDIVQDLAWTTSAMFLKAIDRFN 222
           CF+IVSR+DIPIYEA+VG+A K+EDA+  HQFILHAALDIVQDLAWTTSAM+LKAIDRFN
Sbjct: 6   CFIIVSRDDIPIYEAEVGSATKREDAAQMHQFILHAALDIVQDLAWTTSAMYLKAIDRFN 65

Query: 221 DLVVTVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDT 42
           DLVV+VYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRI SSHFDT
Sbjct: 66  DLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRIASSHFDT 125

Query: 41  KVRALARKYL 12
           KVRALARKYL
Sbjct: 126 KVRALARKYL 135


>gb|ABL97982.1| putative TRAPP subunit [Brassica rapa]
          Length = 135

 Score =  241 bits (616), Expect = 3e-62
 Identities = 116/130 (89%), Positives = 127/130 (97%)
 Frame = -3

Query: 401 CFMIVSRNDIPIYEAQVGNAPKKEDASHQHQFILHAALDIVQDLAWTTSAMFLKAIDRFN 222
           CFMIV+RNDIPIYEA+VG+A K+EDA+  HQFILHAALD+VQDLAWTTSAMFLK++DRFN
Sbjct: 6   CFMIVARNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKSVDRFN 65

Query: 221 DLVVTVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDT 42
           DLVV+VYVTAGHTRLMLLHDSRN+DGIKSFFQEVHELYIKILLNPLYLPGSRITS+HFDT
Sbjct: 66  DLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITSTHFDT 125

Query: 41  KVRALARKYL 12
           KVRALARKYL
Sbjct: 126 KVRALARKYL 135


>ref|NP_178165.2| SNARE-like protein [Arabidopsis thaliana]
           gi|332198292|gb|AEE36413.1| SNARE-like protein
           [Arabidopsis thaliana]
          Length = 135

 Score =  241 bits (614), Expect = 6e-62
 Identities = 116/130 (89%), Positives = 126/130 (96%)
 Frame = -3

Query: 401 CFMIVSRNDIPIYEAQVGNAPKKEDASHQHQFILHAALDIVQDLAWTTSAMFLKAIDRFN 222
           CF+IV RNDIPIYEA+VG+A K+EDA+  HQFILHAALD+VQDLAWTTSAMFLK++DRFN
Sbjct: 6   CFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKSVDRFN 65

Query: 221 DLVVTVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDT 42
           DLVV+VYVTAGHTRLMLLHDSRN+DGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDT
Sbjct: 66  DLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDT 125

Query: 41  KVRALARKYL 12
           KVRALARKYL
Sbjct: 126 KVRALARKYL 135


>ref|XP_002461243.1| hypothetical protein SORBIDRAFT_02g043460 [Sorghum bicolor]
           gi|241924620|gb|EER97764.1| hypothetical protein
           SORBIDRAFT_02g043460 [Sorghum bicolor]
          Length = 135

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/130 (87%), Positives = 126/130 (96%)
 Frame = -3

Query: 401 CFMIVSRNDIPIYEAQVGNAPKKEDASHQHQFILHAALDIVQDLAWTTSAMFLKAIDRFN 222
           CF+IVS+NDIPIYEA+VG+APKKED S+ HQFILHAALD+VQDLAWTT+AMFLK++DRFN
Sbjct: 6   CFVIVSKNDIPIYEAEVGSAPKKEDLSYHHQFILHAALDVVQDLAWTTNAMFLKSVDRFN 65

Query: 221 DLVVTVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDT 42
           DLVV+VYVTAGHTR MLLHDSR++DGIKSFFQEVHELYIKI LNPLYLPGSRITSSHFDT
Sbjct: 66  DLVVSVYVTAGHTRFMLLHDSRSEDGIKSFFQEVHELYIKIFLNPLYLPGSRITSSHFDT 125

Query: 41  KVRALARKYL 12
           KVRALARKYL
Sbjct: 126 KVRALARKYL 135


Top