BLASTX nr result

ID: Panax21_contig00011456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011456
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC16734.1| arabinogalactan protein [Daucus carota]               108   6e-22
ref|XP_002274293.2| PREDICTED: pistil-specific extensin-like pro...   101   5e-20
emb|CBI29537.3| unnamed protein product [Vitis vinifera]              101   5e-20
gb|ABG91751.1| HyPRP1 [Gossypium hirsutum]                             97   1e-18
ref|XP_002305791.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17

>emb|CAC16734.1| arabinogalactan protein [Daucus carota]
          Length = 242

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1   NGYFFISAPKTLTNYGSHKCKVSIVSSPLATCNKPTNLHYGLLGAFLMPLNKPPISTH-P 177
           NGYF ++APKT+T YG HKC+V +VSSP   C+KPTNL YG+ GA L    KPP+ST  P
Sbjct: 160 NGYFSLNAPKTITTYGVHKCRVFVVSSPEKKCDKPTNLRYGVKGAILEKSTKPPVSTKTP 219

Query: 178 IGFDLFNVGPFAFEPSSKEQC 240
             F++F+VGPFAFEPS+K+ C
Sbjct: 220 ATFEMFSVGPFAFEPSTKKPC 240


>ref|XP_002274293.2| PREDICTED: pistil-specific extensin-like protein-like [Vitis
           vinifera]
          Length = 187

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +1

Query: 1   NGYFFISAPKTLTNYGSHKCKVSIVSSPLATCNKPTNLHYGLLGAFLMPLNKPPISTHPI 180
           NGYFFI APK +T +G+HKCKVS++SS   TCN  T+LH+GL GA L P  KPP    P 
Sbjct: 107 NGYFFIQAPKKITTFGAHKCKVSLISSSSPTCNLATDLHFGLKGAILRP-EKPPAGLPPP 165

Query: 181 GFDLFNVGPFAFEPSSKEQCQR 246
            +  F+VGPFAFEP+ K +C R
Sbjct: 166 PYVTFSVGPFAFEPAKKVECPR 187


>emb|CBI29537.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +1

Query: 1   NGYFFISAPKTLTNYGSHKCKVSIVSSPLATCNKPTNLHYGLLGAFLMPLNKPPISTHPI 180
           NGYFFI APK +T +G+HKCKVS++SS   TCN  T+LH+GL GA L P  KPP    P 
Sbjct: 79  NGYFFIQAPKKITTFGAHKCKVSLISSSSPTCNLATDLHFGLKGAILRP-EKPPAGLPPP 137

Query: 181 GFDLFNVGPFAFEPSSKEQCQR 246
            +  F+VGPFAFEP+ K +C R
Sbjct: 138 PYVTFSVGPFAFEPAKKVECPR 159


>gb|ABG91751.1| HyPRP1 [Gossypium hirsutum]
          Length = 326

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/74 (59%), Positives = 58/74 (78%)
 Frame = +1

Query: 1   NGYFFISAPKTLTNYGSHKCKVSIVSSPLATCNKPTNLHYGLLGAFLMPLNKPPISTHPI 180
           NGYFF+ APKT+T++G+HKC VS+VSSP+A C+KP+NLH GL GA L P  + P + + +
Sbjct: 252 NGYFFLQAPKTVTSFGAHKCTVSLVSSPMAKCSKPSNLHGGLKGATLRP--EKPFTANKL 309

Query: 181 GFDLFNVGPFAFEP 222
            F L+ VGPFAFEP
Sbjct: 310 PFILYTVGPFAFEP 323


>ref|XP_002305791.1| predicted protein [Populus trichocarpa] gi|222848755|gb|EEE86302.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/73 (60%), Positives = 50/73 (68%)
 Frame = +1

Query: 1   NGYFFISAPKTLTNYGSHKCKVSIVSSPLATCNKPTNLHYGLLGAFLMPLNKPPISTHPI 180
           NGYF I AP T+TNYG HKCKV +VS+P   C+K TNLH GL GA L P  KP +     
Sbjct: 74  NGYFLIKAPGTITNYGVHKCKVWLVSAPSTACSKITNLHGGLTGAMLRPEKKPFVDEKKR 133

Query: 181 GFDLFNVGPFAFE 219
            F LF+VGPFAFE
Sbjct: 134 EFALFSVGPFAFE 146


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