BLASTX nr result

ID: Panax21_contig00011437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011437
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267779.2| PREDICTED: uncharacterized protein LOC100267...   135   4e-30
ref|XP_002513418.1| conserved hypothetical protein [Ricinus comm...   126   3e-27
ref|XP_002317021.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
emb|CBI34052.3| unnamed protein product [Vitis vinifera]              120   2e-25
ref|XP_002264820.1| PREDICTED: uncharacterized protein LOC100255...   120   2e-25

>ref|XP_002267779.2| PREDICTED: uncharacterized protein LOC100267869 [Vitis vinifera]
          Length = 1092

 Score =  135 bits (341), Expect = 4e-30
 Identities = 81/182 (44%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
 Frame = +3

Query: 54  ESQILYRTSSYPEXXXXXXXXXXXX----FSSEPILARKSSFTSYPPHGGRSQQPSPDPQ 221
           E + LYRTSSYPE                +SSEPIL  KSSFTSYPP GGRS + SP+  
Sbjct: 410 ELKPLYRTSSYPEQQQPQQLQQHQQQQHHYSSEPILVPKSSFTSYPPTGGRSLEGSPNHH 469

Query: 222 SRHSNIPYHPGGHQLPPTSHSHSPFPDPSLQLAALPHGSQFGTSLPQFAPPGLPVNSRPQ 401
           SRH  I +  GG Q+  +  +  PF +P LQL +L HGSQFG +LPQFA PGL VNSRP 
Sbjct: 470 SRH--ISHLSGGPQIALSPSNLPPFSNPQLQLPSLHHGSQFGGNLPQFA-PGLSVNSRPP 526

Query: 402 NQWVNHTSLYLGNHXXXXXXXXXXXXXXXXGLMSPXXXXXXXXXXXXXXXXFRPALGHVS 581
           +QWVN T+++ G+H                GLM P                 +P+ GH+S
Sbjct: 527 SQWVNQTNIFPGDHPSILNNLLQQQLPHQNGLMPPQLMLQQQPQQHRLHHPVQPSFGHLS 586

Query: 582 GL 587
           GL
Sbjct: 587 GL 588


>ref|XP_002513418.1| conserved hypothetical protein [Ricinus communis]
           gi|223547326|gb|EEF48821.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score =  126 bits (316), Expect = 3e-27
 Identities = 78/179 (43%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
 Frame = +3

Query: 54  ESQILYRTSSYPEXXXXXXXXXXXXFSSEPILARKSSFTSYPPHGGRSQQPSPDPQSRHS 233
           E + LYRTSSYPE            FSSEPIL  KSS+TSYPP GG+S Q SP+    H 
Sbjct: 166 ELKPLYRTSSYPEQQQHHQH-----FSSEPILVPKSSYTSYPPPGGQSPQASPN--HSHM 218

Query: 234 NIPYHPGGHQLPPTSHSHSPFPDPSLQLAALPHGSQ-FGTSLPQFAPPGLPVNSRPQNQW 410
           N+ Y  GG Q+  +  + SPF  P LQL  L HGSQ FG +L Q +  GL  N+RP NQW
Sbjct: 219 NMHYLGGGPQMAISLPNLSPFSSPQLQLTGLHHGSQHFGRNLSQLS-SGLSGNNRPPNQW 277

Query: 411 VNHTSLYLGNHXXXXXXXXXXXXXXXXGLMSPXXXXXXXXXXXXXXXXFRPALGHVSGL 587
            NH  LYLG+H                GLM P                 +P+LGH+SG+
Sbjct: 278 ANHAGLYLGDHPNRLNNMLQQQLPHQNGLMPPQLMAQLQTQQHRLHHLVQPSLGHLSGM 336


>ref|XP_002317021.1| predicted protein [Populus trichocarpa] gi|222860086|gb|EEE97633.1|
           predicted protein [Populus trichocarpa]
          Length = 804

 Score =  125 bits (314), Expect = 5e-27
 Identities = 77/183 (42%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
 Frame = +3

Query: 54  ESQILYRTSSYPEXXXXXXXXXXXX----FSSEPILARKSSFTSYPPHGGRSQQPSPDPQ 221
           ES+ L+RTSSYPE                +SSEPIL  KSS+TSYP  GG+S Q SP+  
Sbjct: 150 ESKPLHRTSSYPEQQQQQQQQHQQPHHQHYSSEPILVPKSSYTSYPIQGGQSPQASPNHS 209

Query: 222 SRHSNIPYHPGGHQLPPTSHSHSPFPDPSLQLAALPHGS-QFGTSLPQFAPPGLPVNSRP 398
             H NIPY  GGHQ+  +S +  PF +    L++L HGS  +G +LPQF+  GL  NSRP
Sbjct: 210 --HLNIPYLSGGHQMALSSPNLPPFSNSQPLLSSLHHGSPHYGGNLPQFS-SGLSANSRP 266

Query: 399 QNQWVNHTSLYLGNHXXXXXXXXXXXXXXXXGLMSPXXXXXXXXXXXXXXXXFRPALGHV 578
            +QWVNHT LY G H                GLM P                 +P+LGH+
Sbjct: 267 PSQWVNHTGLYPGEHPNRMNNMLQQPLSHQNGLMPPQLMPQLQSQQHRLHPSIQPSLGHL 326

Query: 579 SGL 587
           SG+
Sbjct: 327 SGM 329


>emb|CBI34052.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  120 bits (301), Expect = 2e-25
 Identities = 73/180 (40%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
 Frame = +3

Query: 51  GESQILYRTSSYPEXXXXXXXXXXXXFSSEPILARKSSFTSYPPHGGRSQQPSP-DPQSR 227
           GES+ LYRTSSYP+            FSSEPIL  KSSFTS+PP GG SQQ SP    S 
Sbjct: 156 GESRPLYRTSSYPQQPQQPHH-----FSSEPILVPKSSFTSFPP-GGSSQQASPRHHHSH 209

Query: 228 HSNIPYHPGGHQLPPTSHSHSPFPDPSLQLAALPHGSQFGTSLPQFAPPGLPVNSRPQNQ 407
           H NI     G QL  ++ + SP  + ++ L+ LPHG  +G ++PQF PPGL VN+RP N 
Sbjct: 210 HLNISSLTVGPQLHLSAPNLSPLSNSNIHLSGLPHGLHYGGNIPQFNPPGLSVNNRPLNH 269

Query: 408 WVNHTSLYLGNHXXXXXXXXXXXXXXXXGLMSPXXXXXXXXXXXXXXXXFRPALGHVSGL 587
           WVNH  L  G+H                G+M                   +P++ H S L
Sbjct: 270 WVNHAGLIHGDHPSLLNNILQQQLPHQNGIMPQQLMSQQQLQQQRLHHSVQPSMAHFSAL 329


>ref|XP_002264820.1| PREDICTED: uncharacterized protein LOC100255521 [Vitis vinifera]
          Length = 812

 Score =  120 bits (301), Expect = 2e-25
 Identities = 73/180 (40%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
 Frame = +3

Query: 51  GESQILYRTSSYPEXXXXXXXXXXXXFSSEPILARKSSFTSYPPHGGRSQQPSP-DPQSR 227
           GES+ LYRTSSYP+            FSSEPIL  KSSFTS+PP GG SQQ SP    S 
Sbjct: 156 GESRPLYRTSSYPQQPQQPHH-----FSSEPILVPKSSFTSFPP-GGSSQQASPRHHHSH 209

Query: 228 HSNIPYHPGGHQLPPTSHSHSPFPDPSLQLAALPHGSQFGTSLPQFAPPGLPVNSRPQNQ 407
           H NI     G QL  ++ + SP  + ++ L+ LPHG  +G ++PQF PPGL VN+RP N 
Sbjct: 210 HLNISSLTVGPQLHLSAPNLSPLSNSNIHLSGLPHGLHYGGNIPQFNPPGLSVNNRPLNH 269

Query: 408 WVNHTSLYLGNHXXXXXXXXXXXXXXXXGLMSPXXXXXXXXXXXXXXXXFRPALGHVSGL 587
           WVNH  L  G+H                G+M                   +P++ H S L
Sbjct: 270 WVNHAGLIHGDHPSLLNNILQQQLPHQNGIMPQQLMSQQQLQQQRLHHSVQPSMAHFSAL 329


Top