BLASTX nr result

ID: Panax21_contig00011421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011421
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266000.2| PREDICTED: T-complex protein 1 subunit eta-l...   269   e-128
emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]   269   e-126
ref|XP_002328218.1| predicted protein [Populus trichocarpa] gi|2...   262   e-125
ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-l...   264   e-124
ref|XP_002312854.1| predicted protein [Populus trichocarpa] gi|2...   263   e-124

>ref|XP_002266000.2| PREDICTED: T-complex protein 1 subunit eta-like [Vitis vinifera]
           gi|296088202|emb|CBI35717.3| unnamed protein product
           [Vitis vinifera]
          Length = 562

 Score =  269 bits (687), Expect(2) = e-128
 Identities = 137/144 (95%), Positives = 140/144 (97%)
 Frame = +3

Query: 84  MTAMMQPQIILLKEGTDTSQGKAQLISNINACMAVADVVRTTLGPRGMDKLIHDDKGNTT 263
           M AM+QPQIILLKEGTDTSQGKAQL+SNI+AC  VADVVRTTLGPRGMDKLIHDDKGNTT
Sbjct: 1   MAAMLQPQIILLKEGTDTSQGKAQLVSNISACTVVADVVRTTLGPRGMDKLIHDDKGNTT 60

Query: 264 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH 443
           ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH
Sbjct: 61  ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH 120

Query: 444 PQNLIRSYRNASYLAIEKIKELAV 515
           PQNLIRSYR ASYLAIEKIKELAV
Sbjct: 121 PQNLIRSYRTASYLAIEKIKELAV 144



 Score =  216 bits (551), Expect(2) = e-128
 Identities = 113/136 (83%), Positives = 116/136 (85%)
 Frame = +2

Query: 632  ATTLSSKLIGGEKEFFASMVVDSVLAIGSDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 811
            ATTLSSKLIGGEKEFFASMVVDSV+AIG+DDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT
Sbjct: 163  ATTLSSKLIGGEKEFFASMVVDSVIAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 222

Query: 812  FSYAGFEQQPKKFXXXXXXXXXXXXXXXXXXXXAEIRLSDPLQYQSIVDAEWNIIYDKLD 991
            FSYAGFEQQPKKF                    AEIRLSDPLQYQSIVDAEWNIIYDKLD
Sbjct: 223  FSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLD 282

Query: 992  KCVKSGAKIVLSRLAI 1039
            KCV+SGAKIVLSRLAI
Sbjct: 283  KCVQSGAKIVLSRLAI 298


>emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]
          Length = 567

 Score =  269 bits (687), Expect(2) = e-126
 Identities = 137/144 (95%), Positives = 140/144 (97%)
 Frame = +3

Query: 84  MTAMMQPQIILLKEGTDTSQGKAQLISNINACMAVADVVRTTLGPRGMDKLIHDDKGNTT 263
           M AM+QPQIILLKEGTDTSQGKAQL+SNI+AC  VADVVRTTLGPRGMDKLIHDDKGNTT
Sbjct: 1   MAAMLQPQIILLKEGTDTSQGKAQLVSNISACTVVADVVRTTLGPRGMDKLIHDDKGNTT 60

Query: 264 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH 443
           ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH
Sbjct: 61  ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH 120

Query: 444 PQNLIRSYRNASYLAIEKIKELAV 515
           PQNLIRSYR ASYLAIEKIKELAV
Sbjct: 121 PQNLIRSYRTASYLAIEKIKELAV 144



 Score =  210 bits (535), Expect(2) = e-126
 Identities = 113/141 (80%), Positives = 116/141 (82%), Gaps = 5/141 (3%)
 Frame = +2

Query: 632  ATTLSSKLIGGEKEFFASMVVDSVLAIGSDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 811
            ATTLSSKLIGGEKEFFASMVVDSV+AIG+DDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT
Sbjct: 163  ATTLSSKLIGGEKEFFASMVVDSVIAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 222

Query: 812  FSYAGFEQQPKKFXXXXXXXXXXXXXXXXXXXXAEIR-----LSDPLQYQSIVDAEWNII 976
            FSYAGFEQQPKKF                    AEIR     LSDPLQYQSIVDAEWNII
Sbjct: 223  FSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRQDYFGLSDPLQYQSIVDAEWNII 282

Query: 977  YDKLDKCVKSGAKIVLSRLAI 1039
            YDKLDKCV+SGAKIVLSRLAI
Sbjct: 283  YDKLDKCVQSGAKIVLSRLAI 303


>ref|XP_002328218.1| predicted protein [Populus trichocarpa] gi|222837733|gb|EEE76098.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  262 bits (670), Expect(2) = e-125
 Identities = 132/144 (91%), Positives = 138/144 (95%)
 Frame = +3

Query: 84  MTAMMQPQIILLKEGTDTSQGKAQLISNINACMAVADVVRTTLGPRGMDKLIHDDKGNTT 263
           M AMMQPQIILLKEGTDTSQGKAQL+SNINAC AVADVVRTTLGPRGMDKLIHDDKGN T
Sbjct: 1   MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVT 60

Query: 264 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH 443
           ISNDGATIMKLLDI+HPA+KILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPF+E+GVH
Sbjct: 61  ISNDGATIMKLLDIIHPASKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFVEEGVH 120

Query: 444 PQNLIRSYRNASYLAIEKIKELAV 515
           PQNLIRSYR A  LAIEK+KELAV
Sbjct: 121 PQNLIRSYRTACNLAIEKVKELAV 144



 Score =  213 bits (541), Expect(2) = e-125
 Identities = 110/136 (80%), Positives = 115/136 (84%)
 Frame = +2

Query: 632  ATTLSSKLIGGEKEFFASMVVDSVLAIGSDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 811
            ATTLSSKLIGGEKEFFASMVVD+V+AIG+DDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT
Sbjct: 163  ATTLSSKLIGGEKEFFASMVVDAVIAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 222

Query: 812  FSYAGFEQQPKKFXXXXXXXXXXXXXXXXXXXXAEIRLSDPLQYQSIVDAEWNIIYDKLD 991
            FSYAGFEQQPKKF                    AEIRLSDP QYQSIVDAEWNIIYDKLD
Sbjct: 223  FSYAGFEQQPKKFVNPKMLLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLD 282

Query: 992  KCVKSGAKIVLSRLAI 1039
            KCV+SGAK+VLSRLAI
Sbjct: 283  KCVQSGAKVVLSRLAI 298


>ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-like [Cucumis sativus]
           gi|449493528|ref|XP_004159333.1| PREDICTED: T-complex
           protein 1 subunit eta-like [Cucumis sativus]
          Length = 562

 Score =  264 bits (675), Expect(2) = e-124
 Identities = 134/144 (93%), Positives = 138/144 (95%)
 Frame = +3

Query: 84  MTAMMQPQIILLKEGTDTSQGKAQLISNINACMAVADVVRTTLGPRGMDKLIHDDKGNTT 263
           M AM+QPQIILLKEGTDTSQGKAQL+SNINAC AVADVVRTTLGPRGMDKLIHDDKGN T
Sbjct: 1   MAAMLQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVT 60

Query: 264 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH 443
           ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLA EFLKEAKPFIEDGVH
Sbjct: 61  ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVH 120

Query: 444 PQNLIRSYRNASYLAIEKIKELAV 515
            QNLIRSYR ASYLAIEK+KELA+
Sbjct: 121 SQNLIRSYRTASYLAIEKVKELAI 144



 Score =  209 bits (533), Expect(2) = e-124
 Identities = 108/136 (79%), Positives = 115/136 (84%)
 Frame = +2

Query: 632  ATTLSSKLIGGEKEFFASMVVDSVLAIGSDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 811
            ATTLSSKLIGGEK+FFASMVVDSV+AIG++DRLNMIGIKKVPGGTMRDSFLVNGVAFKKT
Sbjct: 163  ATTLSSKLIGGEKDFFASMVVDSVIAIGNEDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 222

Query: 812  FSYAGFEQQPKKFXXXXXXXXXXXXXXXXXXXXAEIRLSDPLQYQSIVDAEWNIIYDKLD 991
            FSYAGFEQQPKKF                    AEIRLSDP QYQSIVDAEWNIIY+KLD
Sbjct: 223  FSYAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYEKLD 282

Query: 992  KCVKSGAKIVLSRLAI 1039
            KCV+SGAK+VLSRLAI
Sbjct: 283  KCVESGAKVVLSRLAI 298


>ref|XP_002312854.1| predicted protein [Populus trichocarpa] gi|222849262|gb|EEE86809.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  263 bits (672), Expect(2) = e-124
 Identities = 133/143 (93%), Positives = 137/143 (95%)
 Frame = +3

Query: 84  MTAMMQPQIILLKEGTDTSQGKAQLISNINACMAVADVVRTTLGPRGMDKLIHDDKGNTT 263
           M AMMQPQIILLKEGTDTSQGKAQL+SNINAC AVADVVRTTLGPRGMDKLIHDDKGN T
Sbjct: 1   MAAMMQPQIILLKEGTDTSQGKAQLLSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVT 60

Query: 264 ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH 443
           ISNDGATIMKLLDI+HPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPF+EDGVH
Sbjct: 61  ISNDGATIMKLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFVEDGVH 120

Query: 444 PQNLIRSYRNASYLAIEKIKELA 512
           PQNLIRSYR A  LAIEK+KELA
Sbjct: 121 PQNLIRSYRTACNLAIEKVKELA 143



 Score =  209 bits (533), Expect(2) = e-124
 Identities = 109/136 (80%), Positives = 113/136 (83%)
 Frame = +2

Query: 632  ATTLSSKLIGGEKEFFASMVVDSVLAIGSDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKT 811
            ATTLSSKLIGGEKEFFASMVVD+V+AIG+DDRLNMIGIKKVPGG MRDSFLVNGVAFKKT
Sbjct: 163  ATTLSSKLIGGEKEFFASMVVDAVIAIGNDDRLNMIGIKKVPGGNMRDSFLVNGVAFKKT 222

Query: 812  FSYAGFEQQPKKFXXXXXXXXXXXXXXXXXXXXAEIRLSDPLQYQSIVDAEWNIIYDKLD 991
            FSYAGFEQQPKKF                    AEIRLSDP QYQSIVDAEWNIIYDKLD
Sbjct: 223  FSYAGFEQQPKKFVNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLD 282

Query: 992  KCVKSGAKIVLSRLAI 1039
            KC +SGAKIVLSRLAI
Sbjct: 283  KCAQSGAKIVLSRLAI 298


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