BLASTX nr result
ID: Panax21_contig00011420
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00011420 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera] 112 4e-24 dbj|BAD45605.1| putative t-complex protein 1 theta chain [Oryza ... 106 2e-22 ref|XP_002451569.1| hypothetical protein SORBIDRAFT_04g004030 [S... 106 2e-22 ref|XP_003574780.1| PREDICTED: T-complex protein 1 subunit eta-l... 106 2e-22 gb|EEC81211.1| hypothetical protein OsI_24243 [Oryza sativa Indi... 106 2e-22 >emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera] Length = 567 Score = 112 bits (279), Expect(2) = 4e-24 Identities = 62/90 (68%), Positives = 64/90 (71%) Frame = +2 Query: 86 LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265 LLLNIELELKSEKEN EIR D Y+ LSDPLQYQSIVDAE Sbjct: 241 LLLNIELELKSEKENAEIRQD----------------------YFGLSDPLQYQSIVDAE 278 Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355 WNIIYDKLDKCV+SGAK VLSRLAIGDLAT Sbjct: 279 WNIIYDKLDKCVQSGAKIVLSRLAIGDLAT 308 Score = 24.3 bits (51), Expect(2) = 4e-24 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +3 Query: 63 VPGGTMRDSY 92 VPGGTMRDS+ Sbjct: 203 VPGGTMRDSF 212 >dbj|BAD45605.1| putative t-complex protein 1 theta chain [Oryza sativa Japonica Group] gi|52077028|dbj|BAD46061.1| putative t-complex protein 1 theta chain [Oryza sativa Japonica Group] gi|125598299|gb|EAZ38079.1| hypothetical protein OsJ_22426 [Oryza sativa Japonica Group] Length = 560 Score = 106 bits (264), Expect(2) = 2e-22 Identities = 61/90 (67%), Positives = 61/90 (67%) Frame = +2 Query: 86 LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265 LLLNIELELKSEKEN EIR LSDPLQYQSIVDAE Sbjct: 241 LLLNIELELKSEKENAEIR---------------------------LSDPLQYQSIVDAE 273 Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355 WNIIYDKLDKCVKSGAK VLSRLAIGDLAT Sbjct: 274 WNIIYDKLDKCVKSGAKIVLSRLAIGDLAT 303 Score = 24.3 bits (51), Expect(2) = 2e-22 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +3 Query: 63 VPGGTMRDSY 92 VPGGTMRDS+ Sbjct: 203 VPGGTMRDSF 212 >ref|XP_002451569.1| hypothetical protein SORBIDRAFT_04g004030 [Sorghum bicolor] gi|241931400|gb|EES04545.1| hypothetical protein SORBIDRAFT_04g004030 [Sorghum bicolor] Length = 560 Score = 106 bits (264), Expect(2) = 2e-22 Identities = 61/90 (67%), Positives = 61/90 (67%) Frame = +2 Query: 86 LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265 LLLNIELELKSEKEN EIR LSDPLQYQSIVDAE Sbjct: 241 LLLNIELELKSEKENAEIR---------------------------LSDPLQYQSIVDAE 273 Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355 WNIIYDKLDKCVKSGAK VLSRLAIGDLAT Sbjct: 274 WNIIYDKLDKCVKSGAKIVLSRLAIGDLAT 303 Score = 24.3 bits (51), Expect(2) = 2e-22 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +3 Query: 63 VPGGTMRDSY 92 VPGGTMRDS+ Sbjct: 203 VPGGTMRDSF 212 >ref|XP_003574780.1| PREDICTED: T-complex protein 1 subunit eta-like [Brachypodium distachyon] Length = 557 Score = 106 bits (264), Expect(2) = 2e-22 Identities = 61/90 (67%), Positives = 61/90 (67%) Frame = +2 Query: 86 LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265 LLLNIELELKSEKEN EIR LSDPLQYQSIVDAE Sbjct: 240 LLLNIELELKSEKENAEIR---------------------------LSDPLQYQSIVDAE 272 Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355 WNIIYDKLDKCVKSGAK VLSRLAIGDLAT Sbjct: 273 WNIIYDKLDKCVKSGAKIVLSRLAIGDLAT 302 Score = 24.3 bits (51), Expect(2) = 2e-22 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +3 Query: 63 VPGGTMRDSY 92 VPGGTMRDS+ Sbjct: 202 VPGGTMRDSF 211 >gb|EEC81211.1| hypothetical protein OsI_24243 [Oryza sativa Indica Group] Length = 556 Score = 106 bits (264), Expect(2) = 2e-22 Identities = 61/90 (67%), Positives = 61/90 (67%) Frame = +2 Query: 86 LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265 LLLNIELELKSEKEN EIR LSDPLQYQSIVDAE Sbjct: 241 LLLNIELELKSEKENAEIR---------------------------LSDPLQYQSIVDAE 273 Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355 WNIIYDKLDKCVKSGAK VLSRLAIGDLAT Sbjct: 274 WNIIYDKLDKCVKSGAKIVLSRLAIGDLAT 303 Score = 24.3 bits (51), Expect(2) = 2e-22 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +3 Query: 63 VPGGTMRDSY 92 VPGGTMRDS+ Sbjct: 203 VPGGTMRDSF 212