BLASTX nr result

ID: Panax21_contig00011420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011420
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]   112   4e-24
dbj|BAD45605.1| putative t-complex protein 1 theta chain [Oryza ...   106   2e-22
ref|XP_002451569.1| hypothetical protein SORBIDRAFT_04g004030 [S...   106   2e-22
ref|XP_003574780.1| PREDICTED: T-complex protein 1 subunit eta-l...   106   2e-22
gb|EEC81211.1| hypothetical protein OsI_24243 [Oryza sativa Indi...   106   2e-22

>emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]
          Length = 567

 Score =  112 bits (279), Expect(2) = 4e-24
 Identities = 62/90 (68%), Positives = 64/90 (71%)
 Frame = +2

Query: 86  LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265
           LLLNIELELKSEKEN EIR D                      Y+ LSDPLQYQSIVDAE
Sbjct: 241 LLLNIELELKSEKENAEIRQD----------------------YFGLSDPLQYQSIVDAE 278

Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355
           WNIIYDKLDKCV+SGAK VLSRLAIGDLAT
Sbjct: 279 WNIIYDKLDKCVQSGAKIVLSRLAIGDLAT 308



 Score = 24.3 bits (51), Expect(2) = 4e-24
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 63  VPGGTMRDSY 92
           VPGGTMRDS+
Sbjct: 203 VPGGTMRDSF 212


>dbj|BAD45605.1| putative t-complex protein 1 theta chain [Oryza sativa Japonica
           Group] gi|52077028|dbj|BAD46061.1| putative t-complex
           protein 1 theta chain [Oryza sativa Japonica Group]
           gi|125598299|gb|EAZ38079.1| hypothetical protein
           OsJ_22426 [Oryza sativa Japonica Group]
          Length = 560

 Score =  106 bits (264), Expect(2) = 2e-22
 Identities = 61/90 (67%), Positives = 61/90 (67%)
 Frame = +2

Query: 86  LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265
           LLLNIELELKSEKEN EIR                           LSDPLQYQSIVDAE
Sbjct: 241 LLLNIELELKSEKENAEIR---------------------------LSDPLQYQSIVDAE 273

Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355
           WNIIYDKLDKCVKSGAK VLSRLAIGDLAT
Sbjct: 274 WNIIYDKLDKCVKSGAKIVLSRLAIGDLAT 303



 Score = 24.3 bits (51), Expect(2) = 2e-22
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 63  VPGGTMRDSY 92
           VPGGTMRDS+
Sbjct: 203 VPGGTMRDSF 212


>ref|XP_002451569.1| hypothetical protein SORBIDRAFT_04g004030 [Sorghum bicolor]
           gi|241931400|gb|EES04545.1| hypothetical protein
           SORBIDRAFT_04g004030 [Sorghum bicolor]
          Length = 560

 Score =  106 bits (264), Expect(2) = 2e-22
 Identities = 61/90 (67%), Positives = 61/90 (67%)
 Frame = +2

Query: 86  LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265
           LLLNIELELKSEKEN EIR                           LSDPLQYQSIVDAE
Sbjct: 241 LLLNIELELKSEKENAEIR---------------------------LSDPLQYQSIVDAE 273

Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355
           WNIIYDKLDKCVKSGAK VLSRLAIGDLAT
Sbjct: 274 WNIIYDKLDKCVKSGAKIVLSRLAIGDLAT 303



 Score = 24.3 bits (51), Expect(2) = 2e-22
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 63  VPGGTMRDSY 92
           VPGGTMRDS+
Sbjct: 203 VPGGTMRDSF 212


>ref|XP_003574780.1| PREDICTED: T-complex protein 1 subunit eta-like [Brachypodium
           distachyon]
          Length = 557

 Score =  106 bits (264), Expect(2) = 2e-22
 Identities = 61/90 (67%), Positives = 61/90 (67%)
 Frame = +2

Query: 86  LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265
           LLLNIELELKSEKEN EIR                           LSDPLQYQSIVDAE
Sbjct: 240 LLLNIELELKSEKENAEIR---------------------------LSDPLQYQSIVDAE 272

Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355
           WNIIYDKLDKCVKSGAK VLSRLAIGDLAT
Sbjct: 273 WNIIYDKLDKCVKSGAKIVLSRLAIGDLAT 302



 Score = 24.3 bits (51), Expect(2) = 2e-22
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 63  VPGGTMRDSY 92
           VPGGTMRDS+
Sbjct: 202 VPGGTMRDSF 211


>gb|EEC81211.1| hypothetical protein OsI_24243 [Oryza sativa Indica Group]
          Length = 556

 Score =  106 bits (264), Expect(2) = 2e-22
 Identities = 61/90 (67%), Positives = 61/90 (67%)
 Frame = +2

Query: 86  LLLNIELELKSEKENTEIRSDILVVLQNTCVKQCLP**IIAPIYYRLSDPLQYQSIVDAE 265
           LLLNIELELKSEKEN EIR                           LSDPLQYQSIVDAE
Sbjct: 241 LLLNIELELKSEKENAEIR---------------------------LSDPLQYQSIVDAE 273

Query: 266 WNIIYDKLDKCVKSGAKFVLSRLAIGDLAT 355
           WNIIYDKLDKCVKSGAK VLSRLAIGDLAT
Sbjct: 274 WNIIYDKLDKCVKSGAKIVLSRLAIGDLAT 303



 Score = 24.3 bits (51), Expect(2) = 2e-22
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 63  VPGGTMRDSY 92
           VPGGTMRDS+
Sbjct: 203 VPGGTMRDSF 212


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