BLASTX nr result

ID: Panax21_contig00011367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011367
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
gb|ABK95938.1| unknown [Populus trichocarpa]                          123   1e-26
ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation prot...   122   2e-26
emb|CBI37983.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_003525232.1| PREDICTED: ubiquitin fusion degradation prot...   120   9e-26

>ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|222849415|gb|EEE86962.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  123 bits (309), Expect = 1e-26
 Identities = 71/132 (53%), Positives = 82/132 (62%), Gaps = 4/132 (3%)
 Frame = -2

Query: 386 KEPEKXXXXXXXXXXXA-GQEAPDEAEPKLNPFTGPGRRLDGKPLKYEPPPA-SSSGSRD 213
           KEPEK           +  +E P E EPK NPFTG GRRLDGKPL Y+PPPA SSS S+D
Sbjct: 188 KEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPALSSSVSKD 247

Query: 212 KRPDVSNXXXXXXXXXXXXXXXXXXXGKLVFGSNANRT--TGTQKEAAKETKQEQPQAKE 39
           K+P V++                   GKLVFGSN  RT     ++E+ KETKQEQP+ KE
Sbjct: 248 KQPAVADGSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETKQEQPEKKE 307

Query: 38  EPKFQAFTGKKY 3
           EPKFQAFTGKKY
Sbjct: 308 EPKFQAFTGKKY 319


>gb|ABK95938.1| unknown [Populus trichocarpa]
          Length = 324

 Score =  123 bits (309), Expect = 1e-26
 Identities = 71/132 (53%), Positives = 82/132 (62%), Gaps = 4/132 (3%)
 Frame = -2

Query: 386 KEPEKXXXXXXXXXXXA-GQEAPDEAEPKLNPFTGPGRRLDGKPLKYEPPPA-SSSGSRD 213
           KEPEK           +  +E P E EPK NPFTG GRRLDGKPL Y+PPPA SSS S+D
Sbjct: 189 KEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPALSSSVSKD 248

Query: 212 KRPDVSNXXXXXXXXXXXXXXXXXXXGKLVFGSNANRT--TGTQKEAAKETKQEQPQAKE 39
           K+P V++                   GKLVFGSN  RT     ++E+ KETKQEQP+ KE
Sbjct: 249 KQPAVADGSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETKQEQPEKKE 308

Query: 38  EPKFQAFTGKKY 3
           EPKFQAFTGKKY
Sbjct: 309 EPKFQAFTGKKY 320


>ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
           vinifera]
          Length = 319

 Score =  122 bits (307), Expect = 2e-26
 Identities = 75/130 (57%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
 Frame = -2

Query: 386 KEPEKXXXXXXXXXXXAG-QEAPDEAEPKLNPFTGPGRRLDGKPLKYEPPPASSSGSRDK 210
           KEPEK           A  QEAP E EPK NPF G GRRLDGKP KYEPPP SSSGS+DK
Sbjct: 188 KEPEKPVAPVPLGKAAAEVQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDK 247

Query: 209 RPDVSNXXXXXXXXXXXXXXXXXXXGKLVFGSNANRT-TGTQKEAAKETKQEQPQAKEEP 33
           +P V+                    GKLVFGSN NR+   TQKEAAK TKQE+P+ KEEP
Sbjct: 248 QP-VNRGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPK-KEEP 305

Query: 32  KFQAFTGKKY 3
           KFQ F+GKKY
Sbjct: 306 KFQPFSGKKY 315


>emb|CBI37983.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  122 bits (307), Expect = 2e-26
 Identities = 75/130 (57%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
 Frame = -2

Query: 386 KEPEKXXXXXXXXXXXAG-QEAPDEAEPKLNPFTGPGRRLDGKPLKYEPPPASSSGSRDK 210
           KEPEK           A  QEAP E EPK NPF G GRRLDGKP KYEPPP SSSGS+DK
Sbjct: 178 KEPEKPVAPVPLGKAAAEVQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDK 237

Query: 209 RPDVSNXXXXXXXXXXXXXXXXXXXGKLVFGSNANRT-TGTQKEAAKETKQEQPQAKEEP 33
           +P V+                    GKLVFGSN NR+   TQKEAAK TKQE+P+ KEEP
Sbjct: 238 QP-VNRGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPK-KEEP 295

Query: 32  KFQAFTGKKY 3
           KFQ F+GKKY
Sbjct: 296 KFQPFSGKKY 305


>ref|XP_003525232.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
           max]
          Length = 316

 Score =  120 bits (302), Expect = 9e-26
 Identities = 70/129 (54%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = -2

Query: 386 KEPEKXXXXXXXXXXXAGQEA-PDEAEPKLNPFTGPGRRLDGKPLKYEPPPASSSGSRDK 210
           KEPEK              E  P E EPK NPF+G GRRLDGKPL Y+PPP SSSGS+D+
Sbjct: 188 KEPEKPTAPLSAGKAAVAAEVIPAEDEPKFNPFSGTGRRLDGKPLNYQPPPVSSSGSKDQ 247

Query: 209 RPDVSNXXXXXXXXXXXXXXXXXXXGKLVFGSNANRTTGTQKEAAKETKQEQPQAKEEPK 30
           +PDV N                   GKLVFGSNANRT  T K  AKE+K E P+ KEEPK
Sbjct: 248 KPDVVN--LQSSTASSSQSNARQSQGKLVFGSNANRTKETGK--AKESKPEPPKEKEEPK 303

Query: 29  FQAFTGKKY 3
           FQ F+GKKY
Sbjct: 304 FQPFSGKKY 312


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