BLASTX nr result

ID: Panax21_contig00011366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011366
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
gb|ABK95938.1| unknown [Populus trichocarpa]                          158   5e-37
ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation prot...   158   6e-37
emb|CBI37983.3| unnamed protein product [Vitis vinifera]              158   6e-37
ref|XP_002513003.1| ubiquitin fusion degradaton protein, putativ...   150   9e-35

>ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|222849415|gb|EEE86962.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  158 bits (400), Expect = 5e-37
 Identities = 85/136 (62%), Positives = 96/136 (70%), Gaps = 4/136 (2%)
 Frame = +2

Query: 2   KEPEKPATSVPSSKAPA-GQEAPDEAEPKFNPFTGPGRRLDGKPLKYEPPPA-SSSGSRD 175
           KEPEKP  SVP SKA +  +E P E EPKFNPFTG GRRLDGKPL Y+PPPA SSS S+D
Sbjct: 188 KEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPALSSSVSKD 247

Query: 176 KRPDVSNGRGLPXXXXXXXXXXXXXXGKLVFGSNANRT--TGTQKEAAKETKQEQPQAKE 349
           K+P V++G   P              GKLVFGSN  RT     ++E+ KETKQEQP+ KE
Sbjct: 248 KQPAVADGSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETKQEQPEKKE 307

Query: 350 EPKFQAFTGKKYSLKG 397
           EPKFQAFTGKKYSLKG
Sbjct: 308 EPKFQAFTGKKYSLKG 323


>gb|ABK95938.1| unknown [Populus trichocarpa]
          Length = 324

 Score =  158 bits (400), Expect = 5e-37
 Identities = 85/136 (62%), Positives = 96/136 (70%), Gaps = 4/136 (2%)
 Frame = +2

Query: 2   KEPEKPATSVPSSKAPA-GQEAPDEAEPKFNPFTGPGRRLDGKPLKYEPPPA-SSSGSRD 175
           KEPEKP  SVP SKA +  +E P E EPKFNPFTG GRRLDGKPL Y+PPPA SSS S+D
Sbjct: 189 KEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPALSSSVSKD 248

Query: 176 KRPDVSNGRGLPXXXXXXXXXXXXXXGKLVFGSNANRT--TGTQKEAAKETKQEQPQAKE 349
           K+P V++G   P              GKLVFGSN  RT     ++E+ KETKQEQP+ KE
Sbjct: 249 KQPAVADGSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETKQEQPEKKE 308

Query: 350 EPKFQAFTGKKYSLKG 397
           EPKFQAFTGKKYSLKG
Sbjct: 309 EPKFQAFTGKKYSLKG 324


>ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
           vinifera]
          Length = 319

 Score =  158 bits (399), Expect = 6e-37
 Identities = 88/134 (65%), Positives = 95/134 (70%), Gaps = 2/134 (1%)
 Frame = +2

Query: 2   KEPEKPATSVPSSKAPAG-QEAPDEAEPKFNPFTGPGRRLDGKPLKYEPPPASSSGSRDK 178
           KEPEKP   VP  KA A  QEAP E EPKFNPF G GRRLDGKP KYEPPP SSSGS+DK
Sbjct: 188 KEPEKPVAPVPLGKAAAEVQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDK 247

Query: 179 RPDVSNGRGLPXXXXXXXXXXXXXXGKLVFGSNANRT-TGTQKEAAKETKQEQPQAKEEP 355
           +P V+ G G P              GKLVFGSN NR+   TQKEAAK TKQE+P+ KEEP
Sbjct: 248 QP-VNRGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPK-KEEP 305

Query: 356 KFQAFTGKKYSLKG 397
           KFQ F+GKKYSLKG
Sbjct: 306 KFQPFSGKKYSLKG 319


>emb|CBI37983.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  158 bits (399), Expect = 6e-37
 Identities = 88/134 (65%), Positives = 95/134 (70%), Gaps = 2/134 (1%)
 Frame = +2

Query: 2   KEPEKPATSVPSSKAPAG-QEAPDEAEPKFNPFTGPGRRLDGKPLKYEPPPASSSGSRDK 178
           KEPEKP   VP  KA A  QEAP E EPKFNPF G GRRLDGKP KYEPPP SSSGS+DK
Sbjct: 178 KEPEKPVAPVPLGKAAAEVQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDK 237

Query: 179 RPDVSNGRGLPXXXXXXXXXXXXXXGKLVFGSNANRT-TGTQKEAAKETKQEQPQAKEEP 355
           +P V+ G G P              GKLVFGSN NR+   TQKEAAK TKQE+P+ KEEP
Sbjct: 238 QP-VNRGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPK-KEEP 295

Query: 356 KFQAFTGKKYSLKG 397
           KFQ F+GKKYSLKG
Sbjct: 296 KFQPFSGKKYSLKG 309


>ref|XP_002513003.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
           gi|223548014|gb|EEF49506.1| ubiquitin fusion degradaton
           protein, putative [Ricinus communis]
          Length = 356

 Score =  150 bits (380), Expect = 9e-35
 Identities = 80/134 (59%), Positives = 89/134 (66%), Gaps = 2/134 (1%)
 Frame = +2

Query: 2   KEPEKPATSVPSSKAPAG-QEAPDEAEPKFNPFTGPGRRLDGKPLKYEPPPASSSGSRDK 178
           KEPE+   S+P  KA A  +E P+E EPKFNPFTG  RRLDGKPLK +P P SS GS+DK
Sbjct: 223 KEPERTTPSIPQKKATAQVEEVPEETEPKFNPFTGVARRLDGKPLKQQPFPVSSQGSKDK 282

Query: 179 RPDVSNGRGLPXXXXXXXXXXXXXXGKLVFGSNANRT-TGTQKEAAKETKQEQPQAKEEP 355
           +  V +GRG P              GKLVFGSN NR    TQKE AKETK EQ Q  EEP
Sbjct: 283 QAAVPSGRGQPSLESSSQNSARQSQGKLVFGSNVNRAPKETQKEVAKETKPEQSQKNEEP 342

Query: 356 KFQAFTGKKYSLKG 397
           KFQ FTG+KYSLKG
Sbjct: 343 KFQPFTGRKYSLKG 356


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