BLASTX nr result

ID: Panax21_contig00011340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011340
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm...   217   7e-55
emb|CBI37243.3| unnamed protein product [Vitis vinifera]              214   4e-54
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...   214   4e-54
emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]   214   4e-54
ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|2...   212   2e-53

>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
            gi|223539723|gb|EEF41305.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1384

 Score =  217 bits (553), Expect = 7e-55
 Identities = 103/131 (78%), Positives = 121/131 (92%)
 Frame = -1

Query: 394  SVPDSAPSIPQILHLICNGNDDFSSARKHGALQQLVEASVANDQSIWTKNFNQILTVELE 215
            S+PDS PSIPQILHLICNGND+  +A K GALQQL+EAS+AN+ S+W+K FNQILT  LE
Sbjct: 1143 SLPDSGPSIPQILHLICNGNDESPTASKRGALQQLIEASMANEHSVWSKYFNQILTAVLE 1202

Query: 214  ILDDSDSSIRELALSLVVEMLKNQKDAMEDSVEIVIEKLLHVTKDTVPKVANEAEHCLTI 35
            +LDD++SSIRELALSL+VEMLKNQKDA+EDS+E+VIEKLLHVTKD VPKV+NEAEHCL+I
Sbjct: 1203 VLDDAESSIRELALSLIVEMLKNQKDAVEDSIEVVIEKLLHVTKDVVPKVSNEAEHCLSI 1262

Query: 34   VMSQYDPFRCL 2
            V+SQYDPFRCL
Sbjct: 1263 VLSQYDPFRCL 1273


>emb|CBI37243.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  214 bits (546), Expect = 4e-54
 Identities = 107/131 (81%), Positives = 118/131 (90%)
 Frame = -1

Query: 394 SVPDSAPSIPQILHLICNGNDDFSSARKHGALQQLVEASVANDQSIWTKNFNQILTVELE 215
           S  ++ PSIPQILHLICNGND+  +A K GALQQL+EASVA+DQ+IWTK FNQILT  LE
Sbjct: 34  SATETGPSIPQILHLICNGNDEKPTASKRGALQQLIEASVADDQAIWTKYFNQILTAILE 93

Query: 214 ILDDSDSSIRELALSLVVEMLKNQKDAMEDSVEIVIEKLLHVTKDTVPKVANEAEHCLTI 35
           ILDDSDSSIRELALSL+VEMLKNQK +MEDSVEIVIEKLLHV KD VPKV+NEAEHCLTI
Sbjct: 94  ILDDSDSSIRELALSLIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVPKVSNEAEHCLTI 153

Query: 34  VMSQYDPFRCL 2
           V+SQYDPFRCL
Sbjct: 154 VLSQYDPFRCL 164


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score =  214 bits (546), Expect = 4e-54
 Identities = 107/131 (81%), Positives = 118/131 (90%)
 Frame = -1

Query: 394  SVPDSAPSIPQILHLICNGNDDFSSARKHGALQQLVEASVANDQSIWTKNFNQILTVELE 215
            S  ++ PSIPQILHLICNGND+  +A K GALQQL+EASVA+DQ+IWTK FNQILT  LE
Sbjct: 1199 SATETGPSIPQILHLICNGNDEKPTASKRGALQQLIEASVADDQAIWTKYFNQILTAILE 1258

Query: 214  ILDDSDSSIRELALSLVVEMLKNQKDAMEDSVEIVIEKLLHVTKDTVPKVANEAEHCLTI 35
            ILDDSDSSIRELALSL+VEMLKNQK +MEDSVEIVIEKLLHV KD VPKV+NEAEHCLTI
Sbjct: 1259 ILDDSDSSIRELALSLIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVPKVSNEAEHCLTI 1318

Query: 34   VMSQYDPFRCL 2
            V+SQYDPFRCL
Sbjct: 1319 VLSQYDPFRCL 1329


>emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]
          Length = 1135

 Score =  214 bits (546), Expect = 4e-54
 Identities = 107/131 (81%), Positives = 118/131 (90%)
 Frame = -1

Query: 394  SVPDSAPSIPQILHLICNGNDDFSSARKHGALQQLVEASVANDQSIWTKNFNQILTVELE 215
            S  ++ PSIPQILHLICNGND+  +A K GALQQL+EASVA+DQ+IWTK FNQILT  LE
Sbjct: 894  SATETGPSIPQILHLICNGNDEKPTASKRGALQQLIEASVADDQAIWTKYFNQILTAILE 953

Query: 214  ILDDSDSSIRELALSLVVEMLKNQKDAMEDSVEIVIEKLLHVTKDTVPKVANEAEHCLTI 35
            ILDDSDSSIRELALSL+VEMLKNQK +MEDSVEIVIEKLLHV KD VPKV+NEAEHCLTI
Sbjct: 954  ILDDSDSSIRELALSLIVEMLKNQKGSMEDSVEIVIEKLLHVAKDIVPKVSNEAEHCLTI 1013

Query: 34   VMSQYDPFRCL 2
            V+SQYDPFRCL
Sbjct: 1014 VLSQYDPFRCL 1024


>ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|222844820|gb|EEE82367.1|
            predicted protein [Populus trichocarpa]
          Length = 1426

 Score =  212 bits (540), Expect = 2e-53
 Identities = 101/131 (77%), Positives = 117/131 (89%)
 Frame = -1

Query: 394  SVPDSAPSIPQILHLICNGNDDFSSARKHGALQQLVEASVANDQSIWTKNFNQILTVELE 215
            S+ D+ PSIPQILHLICNGND+  ++ K GALQQL+EAS+AND S+W+K FNQILT  LE
Sbjct: 1185 SLADTGPSIPQILHLICNGNDESPTSSKRGALQQLIEASMANDPSVWSKYFNQILTAVLE 1244

Query: 214  ILDDSDSSIRELALSLVVEMLKNQKDAMEDSVEIVIEKLLHVTKDTVPKVANEAEHCLTI 35
            +LDDSDSSIREL LSL+VEMLKNQKDAMEDS+EI IEKLLHVT+D VPKV+NEAEHCLT+
Sbjct: 1245 VLDDSDSSIRELTLSLIVEMLKNQKDAMEDSIEIAIEKLLHVTEDIVPKVSNEAEHCLTV 1304

Query: 34   VMSQYDPFRCL 2
             +SQYDPFRCL
Sbjct: 1305 ALSQYDPFRCL 1315


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