BLASTX nr result

ID: Panax21_contig00011333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011333
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320287.1| predicted protein [Populus trichocarpa] gi|2...   101   2e-19
ref|XP_002515269.1| kinase, putative [Ricinus communis] gi|22354...    92   2e-16
ref|XP_002270928.1| PREDICTED: receptor-like serine/threonine-pr...    84   5e-14
emb|CAN74588.1| hypothetical protein VITISV_041991 [Vitis vinifera]    81   3e-13
ref|XP_004156817.1| PREDICTED: receptor-like serine/threonine-pr...    57   8e-06

>ref|XP_002320287.1| predicted protein [Populus trichocarpa] gi|222861060|gb|EEE98602.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  101 bits (252), Expect = 2e-19
 Identities = 56/126 (44%), Positives = 72/126 (57%)
 Frame = -1

Query: 448 GALKKVQWLLLKLFLVTCYVLCIAYADLPDNPVEAQIISPTNLPPLAPATNYIANKLYLP 269
           G  ++V +L L+LF+ +CYV+ I  ADL D+  E  I+SP+ +P  APA         LP
Sbjct: 11  GLSRRVWYLFLQLFINSCYVISIINADLADHQFEGPILSPSRVPSDAPAIPD------LP 64

Query: 268 LPADLPVFHKPHQKHFSPIAAPNLVVAPAQPPYHGPLITXXXXXXXXXXXXXXXXXSKLV 89
           LPA+LP+ HKP +KHFSP  AP  VV PA PP +GPLIT                 + LV
Sbjct: 65  LPANLPLLHKPREKHFSPHGAPTFVVPPAHPPNYGPLITSGHPPTSSRLSKPSMKKNGLV 124

Query: 88  SPSAGL 71
            PS GL
Sbjct: 125 PPSVGL 130


>ref|XP_002515269.1| kinase, putative [Ricinus communis] gi|223545749|gb|EEF47253.1|
           kinase, putative [Ricinus communis]
          Length = 711

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 57/130 (43%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
 Frame = -1

Query: 454 GTGA--LKKVQWLLLKLFLVTCYVLCIAYADLPDNPVEAQIISPTNLPPLAPATNYIANK 281
           GTGA   +KV   LL++ +V+CYV  I  AD  D   +A I SP+  P  +PA       
Sbjct: 9   GTGAEVSRKVCCFLLQILVVSCYVNPITDAD--DQLFKAPITSPSRAPSASPAIPD---- 62

Query: 280 LYLPLPADLPVFHKPHQKHFSPIAAPNLVVAPAQPPYHGPLITXXXXXXXXXXXXXXXXX 101
             LPLPA LP FHKPH+KHF+P+ AP + V+PA+PP +GPLIT                 
Sbjct: 63  --LPLPAHLPSFHKPHRKHFAPLGAPLVGVSPAEPPNYGPLITSSHAPTSSRFSKPSMKK 120

Query: 100 SKLVSPSAGL 71
           + LV PS GL
Sbjct: 121 NALVPPSVGL 130


>ref|XP_002270928.1| PREDICTED: receptor-like serine/threonine-protein kinase ALE2
           [Vitis vinifera] gi|297743991|emb|CBI36961.3| unnamed
           protein product [Vitis vinifera]
          Length = 707

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 46/114 (40%), Positives = 63/114 (55%)
 Frame = -1

Query: 382 IAYADLPDNPVEAQIISPTNLPPLAPATNYIANKLYLPLPADLPVFHKPHQKHFSPIAAP 203
           +A+ADLPDN +EA ++SPT+ P   PA         LPLP++LP++H+  QKH  P   P
Sbjct: 1   MAHADLPDNQLEAPLVSPTSAPLATPALPD------LPLPSNLPLYHRRKQKHPMPSHVP 54

Query: 202 NLVVAPAQPPYHGPLITXXXXXXXXXXXXXXXXXSKLVSPSAGLAFLRLAEISP 41
             V+AP+QPP +GPL+T                   LVSP  GL    L +I+P
Sbjct: 55  KRVLAPSQPPDYGPLVTSAHPPTSSRLSKPSMKRGGLVSPGTGLVPPHLEDIAP 108


>emb|CAN74588.1| hypothetical protein VITISV_041991 [Vitis vinifera]
          Length = 707

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 46/114 (40%), Positives = 65/114 (57%)
 Frame = -1

Query: 382 IAYADLPDNPVEAQIISPTNLPPLAPATNYIANKLYLPLPADLPVFHKPHQKHFSPIAAP 203
           +A+ADLPDN +EA ++SPT+ P    AT  + +   LPLP++LP++H+  QKH  P   P
Sbjct: 1   MAHADLPDNQLEAPLVSPTSAPL---ATXALPD---LPLPSNLPLYHRRKQKHPMPSHVP 54

Query: 202 NLVVAPAQPPYHGPLITXXXXXXXXXXXXXXXXXSKLVSPSAGLAFLRLAEISP 41
             V+AP+QPP +GPL+T                   LVSP  GL    L +I+P
Sbjct: 55  KRVLAPSQPPDYGPLVTSAHPPTSSRLSKPSMKRGGLVSPGTGLVPPHLEDIAP 108


>ref|XP_004156817.1| PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like
           [Cucumis sativus]
          Length = 723

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 36/99 (36%), Positives = 54/99 (54%)
 Frame = -1

Query: 448 GALKKVQWLLLKLFLVTCYVLCIAYADLPDNPVEAQIISPTNLPPLAPATNYIANKLYLP 269
           G L++V +   K  ++  +V+ +  AD+ +       + PT  P +APAT  I      P
Sbjct: 11  GILEQVSFQFPKQLILLWFVITVTNADVAN-------VLPT--PFVAPATRDI------P 55

Query: 268 LPADLPVFHKPHQKHFSPIAAPNLVVAPAQPPYHGPLIT 152
           LPA LP+    H+K+ SP +AP   +AP+ PPY G LIT
Sbjct: 56  LPAKLPLHQHHHRKYMSPQSAPEAGLAPSSPPYFGNLIT 94


Top