BLASTX nr result

ID: Panax21_contig00011314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011314
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   365   2e-98
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...   362   1e-97
emb|CBI30553.3| unnamed protein product [Vitis vinifera]              362   1e-97
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   346   6e-93
ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago t...   338   2e-90

>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score =  365 bits (936), Expect = 2e-98
 Identities = 171/265 (64%), Positives = 215/265 (81%), Gaps = 1/265 (0%)
 Frame = -1

Query: 1234 DPSCDIRDIIRSLSFPYLRRCALLWKVINSSTPAPFSYGDHVLERSSNAADDTMGYAN-G 1058
            DP+ DI++ IR  +FPYLRRCALLWK++ SS PAPF   +++L+RS NA  D M +AN  
Sbjct: 1773 DPNVDIKNAIRRFTFPYLRRCALLWKILYSSIPAPFCDEENILDRSWNAPKDIMDWANIE 1832

Query: 1057 MXXXXXXXXXEKIFKIPSLHIVLKDELLRSLVLKWMHHFSQEFEVRALQRTMNLTPAVPY 878
            +         EK+FKIPSL +VLKDEL RS V  W HHF +EF++R +Q+ M++TPAVP+
Sbjct: 1833 IFEVAKIQELEKMFKIPSLDMVLKDELSRSTVSIWCHHFCKEFDLRRIQQNMHVTPAVPF 1892

Query: 877  RLMLLPHIYQELLQRYIKQHCPLCENVPEDPALCLLCGKLCSPNWKSCCKKSGCQAHSMI 698
             LM LP++YQ+LLQR IKQ CP C++V +DPALCLLCG+LCSP+WKSCC++SGCQ H++ 
Sbjct: 1893 ELMRLPNVYQDLLQRCIKQRCPECKSVLDDPALCLLCGRLCSPSWKSCCRESGCQTHAVT 1952

Query: 697  CGAGTGVFLLIRKTTTLLQRSGRQTSWPSPYLDAYGEEDIEMHRGKPLFLNEERYAALTH 518
            CGAGTGVFLLI++TT LLQRS RQ  WPSPYLDA+GEED EMHRGKPL+LNEERYAALT+
Sbjct: 1953 CGAGTGVFLLIKRTTILLQRSARQAPWPSPYLDAFGEEDFEMHRGKPLYLNEERYAALTY 2012

Query: 517  MVASHGFDRSSKVLRQTTVGALFML 443
            MVASHG DRSS+VL QTT+G+ F++
Sbjct: 2013 MVASHGLDRSSRVLGQTTIGSFFLV 2037


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score =  362 bits (929), Expect = 1e-97
 Identities = 174/265 (65%), Positives = 206/265 (77%), Gaps = 1/265 (0%)
 Frame = -1

Query: 1234 DPSCDIRDIIRSLSFPYLRRCALLWKVINSSTPAPFSYGDHVLERSSNAADDTMGYANG- 1058
            DPSC+I+D+IRSLSFPYLRRCALLWK++NSS  APF     V +R  NA DD M   NG 
Sbjct: 1784 DPSCNIKDVIRSLSFPYLRRCALLWKLLNSSITAPFCDRPLVFDRPFNAIDDMMDCTNGA 1843

Query: 1057 MXXXXXXXXXEKIFKIPSLHIVLKDELLRSLVLKWMHHFSQEFEVRALQRTMNLTPAVPY 878
            +         E +FKIP L  VLKDE LRSLV  W HHFS+ FEV +L   +  TPAVP+
Sbjct: 1844 LLDLIHVEQLENMFKIPQLDDVLKDEALRSLVQTWFHHFSKAFEVCSLPSVLYSTPAVPF 1903

Query: 877  RLMLLPHIYQELLQRYIKQHCPLCENVPEDPALCLLCGKLCSPNWKSCCKKSGCQAHSMI 698
            +LM LPH+Y++LLQRYIKQ CP C+ V  DP LCLLCG+LCSP+WK CC+++GCQAH+M 
Sbjct: 1904 KLMQLPHVYEDLLQRYIKQQCPDCKTVLNDPVLCLLCGRLCSPSWKPCCRENGCQAHAMT 1963

Query: 697  CGAGTGVFLLIRKTTTLLQRSGRQTSWPSPYLDAYGEEDIEMHRGKPLFLNEERYAALTH 518
            CGAGTGV LLI+KTT LLQRS RQ  WPS YLDA+GEEDIEMHRGKPL+LN+ERYAAL+H
Sbjct: 1964 CGAGTGVSLLIKKTTILLQRSARQAPWPSLYLDAFGEEDIEMHRGKPLYLNKERYAALSH 2023

Query: 517  MVASHGFDRSSKVLRQTTVGALFML 443
            MVASHG DRSSKVL +TT+ A F++
Sbjct: 2024 MVASHGLDRSSKVLGETTIAAFFLI 2048


>emb|CBI30553.3| unnamed protein product [Vitis vinifera]
          Length = 1254

 Score =  362 bits (929), Expect = 1e-97
 Identities = 174/265 (65%), Positives = 206/265 (77%), Gaps = 1/265 (0%)
 Frame = -1

Query: 1234 DPSCDIRDIIRSLSFPYLRRCALLWKVINSSTPAPFSYGDHVLERSSNAADDTMGYANG- 1058
            DPSC+I+D+IRSLSFPYLRRCALLWK++NSS  APF     V +R  NA DD M   NG 
Sbjct: 990  DPSCNIKDVIRSLSFPYLRRCALLWKLLNSSITAPFCDRPLVFDRPFNAIDDMMDCTNGA 1049

Query: 1057 MXXXXXXXXXEKIFKIPSLHIVLKDELLRSLVLKWMHHFSQEFEVRALQRTMNLTPAVPY 878
            +         E +FKIP L  VLKDE LRSLV  W HHFS+ FEV +L   +  TPAVP+
Sbjct: 1050 LLDLIHVEQLENMFKIPQLDDVLKDEALRSLVQTWFHHFSKAFEVCSLPSVLYSTPAVPF 1109

Query: 877  RLMLLPHIYQELLQRYIKQHCPLCENVPEDPALCLLCGKLCSPNWKSCCKKSGCQAHSMI 698
            +LM LPH+Y++LLQRYIKQ CP C+ V  DP LCLLCG+LCSP+WK CC+++GCQAH+M 
Sbjct: 1110 KLMQLPHVYEDLLQRYIKQQCPDCKTVLNDPVLCLLCGRLCSPSWKPCCRENGCQAHAMT 1169

Query: 697  CGAGTGVFLLIRKTTTLLQRSGRQTSWPSPYLDAYGEEDIEMHRGKPLFLNEERYAALTH 518
            CGAGTGV LLI+KTT LLQRS RQ  WPS YLDA+GEEDIEMHRGKPL+LN+ERYAAL+H
Sbjct: 1170 CGAGTGVSLLIKKTTILLQRSARQAPWPSLYLDAFGEEDIEMHRGKPLYLNKERYAALSH 1229

Query: 517  MVASHGFDRSSKVLRQTTVGALFML 443
            MVASHG DRSSKVL +TT+ A F++
Sbjct: 1230 MVASHGLDRSSKVLGETTIAAFFLI 1254


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score =  346 bits (888), Expect = 6e-93
 Identities = 165/265 (62%), Positives = 210/265 (79%), Gaps = 1/265 (0%)
 Frame = -1

Query: 1234 DPSCDIRDIIRSLSFPYLRRCALLWKVINSSTPAPFSYGDHVLERSSNAADDTMGYAN-G 1058
            DP+ DI++ IR  +FPYLRRCALLWK++ SS PAPF   +++L+RS  A  DTM  AN  
Sbjct: 1772 DPNGDIKNAIRRFTFPYLRRCALLWKILYSSIPAPFCDEENILDRSWIAPKDTMDRANIE 1831

Query: 1057 MXXXXXXXXXEKIFKIPSLHIVLKDELLRSLVLKWMHHFSQEFEVRALQRTMNLTPAVPY 878
            +         EK+FKIPSL +VLKDEL RS V  W HHF +EF++R +Q+ M++TPAVP+
Sbjct: 1832 IFEVTKIQELEKMFKIPSLDVVLKDELSRSTVSIWCHHFCKEFDLRRIQQNMHVTPAVPF 1891

Query: 877  RLMLLPHIYQELLQRYIKQHCPLCENVPEDPALCLLCGKLCSPNWKSCCKKSGCQAHSMI 698
             LM LP++YQ+LLQR IKQ CP C++V ++PALCLLCG+LC P WKSCC+++GCQ H++ 
Sbjct: 1892 ELMRLPNVYQDLLQRCIKQRCPDCKSVLDEPALCLLCGRLCCPIWKSCCRENGCQTHAVG 1951

Query: 697  CGAGTGVFLLIRKTTTLLQRSGRQTSWPSPYLDAYGEEDIEMHRGKPLFLNEERYAALTH 518
            CGAGTGVFLLIR+TT LL RS RQ  WPSPYLD +GEED EM+RGKPL+LNEERYAALT+
Sbjct: 1952 CGAGTGVFLLIRRTTILLLRSARQAPWPSPYLDDFGEEDFEMNRGKPLYLNEERYAALTY 2011

Query: 517  MVASHGFDRSSKVLRQTTVGALFML 443
            MVASHG DRSS+VL +TT+G+ F++
Sbjct: 2012 MVASHGLDRSSRVLGRTTIGSFFLV 2036


>ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago truncatula]
            gi|355498141|gb|AES79344.1| E3 ubiquitin-protein ligase
            ubr1 [Medicago truncatula]
          Length = 2105

 Score =  338 bits (867), Expect = 2e-90
 Identities = 164/265 (61%), Positives = 200/265 (75%), Gaps = 2/265 (0%)
 Frame = -1

Query: 1234 DPSCDIRDIIRSLSFPYLRRCALLWKVINSSTPAPFSYGDHVLERSSNAADDTMGYANGM 1055
            D + DI+D IR  S PYLRRCALLWK++ SS PAPF  G++   RS +   DTM  +  +
Sbjct: 1751 DANVDIKDAIRRFSLPYLRRCALLWKILYSSIPAPFCDGENTSNRSWHLPRDTMCSSVDI 1810

Query: 1054 XXXXXXXXXE--KIFKIPSLHIVLKDELLRSLVLKWMHHFSQEFEVRALQRTMNLTPAVP 881
                     E   +FKIP L +VLKDEL RS V  W  HF +EFE + +QR +++TPAVP
Sbjct: 1811 NKFEVTKIQELENMFKIPPLDVVLKDELSRSSVSIWCRHFCKEFESKRIQRNIHVTPAVP 1870

Query: 880  YRLMLLPHIYQELLQRYIKQHCPLCENVPEDPALCLLCGKLCSPNWKSCCKKSGCQAHSM 701
            + LM LP++YQ+LLQR +KQ CP C+   +DPALCLLCG+LCSP+WKSCC++SGCQ HS+
Sbjct: 1871 FELMRLPNVYQDLLQRCVKQRCPECKGRLDDPALCLLCGRLCSPSWKSCCRESGCQTHSV 1930

Query: 700  ICGAGTGVFLLIRKTTTLLQRSGRQTSWPSPYLDAYGEEDIEMHRGKPLFLNEERYAALT 521
             CGAGTGVFLL R+TT LLQRS RQ  WPSPYLDA+GEED EM+RGKPLFLN ERYAALT
Sbjct: 1931 TCGAGTGVFLLTRRTTILLQRSARQAPWPSPYLDAFGEEDFEMNRGKPLFLNMERYAALT 1990

Query: 520  HMVASHGFDRSSKVLRQTTVGALFM 446
            +MVASHG DRSSKVL QTT+G+ F+
Sbjct: 1991 YMVASHGLDRSSKVLGQTTIGSFFL 2015


Top