BLASTX nr result
ID: Panax21_contig00011306
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00011306 (457 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298161.1| predicted protein [Populus trichocarpa] gi|2... 84 9e-15 ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-li... 78 9e-13 ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li... 77 1e-12 ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-li... 77 1e-12 emb|CBI24290.3| unnamed protein product [Vitis vinifera] 77 1e-12 >ref|XP_002298161.1| predicted protein [Populus trichocarpa] gi|222845419|gb|EEE82966.1| predicted protein [Populus trichocarpa] Length = 429 Score = 84.3 bits (207), Expect = 9e-15 Identities = 41/52 (78%), Positives = 46/52 (88%) Frame = -3 Query: 452 TII*LENYINYKPSSSG*DDNRMKRMSLIARAAESMADGDIINVHIRRYRKW 297 ++I ENYINY+PSS G DDN MKRMSLIARAAES+ADGDIINV IRRYR+W Sbjct: 97 SVIWQENYINYRPSSIGKDDNGMKRMSLIARAAESIADGDIINVQIRRYRQW 148 >ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-like [Glycine max] Length = 1112 Score = 77.8 bits (190), Expect = 9e-13 Identities = 35/47 (74%), Positives = 43/47 (91%) Frame = -3 Query: 437 ENYINYKPSSSG*DDNRMKRMSLIARAAESMADGDIINVHIRRYRKW 297 ENYINY+PS +G DD+ +KRM+LIARAAES+ADGDI+NV IRRYR+W Sbjct: 795 ENYINYRPSMAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQW 841 >ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera] Length = 933 Score = 77.4 bits (189), Expect = 1e-12 Identities = 35/47 (74%), Positives = 42/47 (89%) Frame = -3 Query: 437 ENYINYKPSSSG*DDNRMKRMSLIARAAESMADGDIINVHIRRYRKW 297 ENYINY+P+ +G DDN +KRMSL+ARAAES+ DGDIINV IRRYR+W Sbjct: 613 ENYINYRPTLAGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQW 659 >ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-like [Glycine max] Length = 947 Score = 77.4 bits (189), Expect = 1e-12 Identities = 35/47 (74%), Positives = 43/47 (91%) Frame = -3 Query: 437 ENYINYKPSSSG*DDNRMKRMSLIARAAESMADGDIINVHIRRYRKW 297 ENYINY+PS +G DD+ +KRM+LIARAAES+ADGDI+NV IRRYR+W Sbjct: 627 ENYINYRPSLAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQW 673 >emb|CBI24290.3| unnamed protein product [Vitis vinifera] Length = 941 Score = 77.4 bits (189), Expect = 1e-12 Identities = 35/47 (74%), Positives = 42/47 (89%) Frame = -3 Query: 437 ENYINYKPSSSG*DDNRMKRMSLIARAAESMADGDIINVHIRRYRKW 297 ENYINY+P+ +G DDN +KRMSL+ARAAES+ DGDIINV IRRYR+W Sbjct: 621 ENYINYRPTLAGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQW 667