BLASTX nr result

ID: Panax21_contig00011299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011299
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like ...   341   3e-91
emb|CBI20722.3| unnamed protein product [Vitis vinifera]              341   3e-91
ref|XP_002516134.1| conserved hypothetical protein [Ricinus comm...   325   2e-86
ref|XP_002309467.1| f-box family protein [Populus trichocarpa] g...   323   6e-86
ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|2...   315   2e-83

>ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like [Vitis vinifera]
          Length = 922

 Score =  341 bits (874), Expect = 3e-91
 Identities = 173/265 (65%), Positives = 205/265 (77%), Gaps = 3/265 (1%)
 Frame = +2

Query: 557  DSHNKRPKVHSFSLDSVWPFASVDSDY-NINGLLGRDYNINRSS--FGNEIHYLSPILND 727
            D H+KR KVHS+S    +   ++  +  N +    RDYN+++S   F NEI  L+ + ND
Sbjct: 104  DVHHKRAKVHSYSQGCTYAITAMPLEAGNSSSSTDRDYNVSQSPIPFNNEILRLTSMSND 163

Query: 728  VINKNLIGSVSRRNDEGDGCNSPKMEDWEVQMDLTDDLLHMVFSFLDHVNLCRAAKVCRQ 907
              ++N + S   R++EGDG ++ KMED EV+MDLTDDLLHMVFSFLDH+NLCRAA VC+Q
Sbjct: 164  SDDENPLDSNDGRDEEGDGFSTSKMEDLEVRMDLTDDLLHMVFSFLDHINLCRAAIVCKQ 223

Query: 908  WRTAGAHEDFWRILNFENRNISVLQFEDMCRRYPKATQVNINGAPAIHLLAMKAISSLRN 1087
            WR   +HEDFWR LNFENRNIS  QFEDMCRRYP AT+VNI GAP+IH L M A+SSLRN
Sbjct: 224  WRAGSSHEDFWRCLNFENRNISEEQFEDMCRRYPNATEVNIFGAPSIHSLVMTAMSSLRN 283

Query: 1088 LEVLILGKGQLGETFFQDLIGCQKLRSLIVNDATLGNGIQEIPIYHDQLCHLQIVKCRLL 1267
            LE L LGKG LG+TFFQ L  C  L+ L+VNDATLGNGIQEIPIYHD+L HLQI KCR+L
Sbjct: 284  LETLTLGKGTLGDTFFQALADCYMLKRLLVNDATLGNGIQEIPIYHDRLHHLQITKCRVL 343

Query: 1268 RISVRCPQLQTLSLKRSSMAHAALN 1342
            RISVRCPQL+TLSLKRSSMAHA LN
Sbjct: 344  RISVRCPQLETLSLKRSSMAHAVLN 368


>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score =  341 bits (874), Expect = 3e-91
 Identities = 173/265 (65%), Positives = 205/265 (77%), Gaps = 3/265 (1%)
 Frame = +2

Query: 557  DSHNKRPKVHSFSLDSVWPFASVDSDY-NINGLLGRDYNINRSS--FGNEIHYLSPILND 727
            D H+KR KVHS+S    +   ++  +  N +    RDYN+++S   F NEI  L+ + ND
Sbjct: 70   DVHHKRAKVHSYSQGCTYAITAMPLEAGNSSSSTDRDYNVSQSPIPFNNEILRLTSMSND 129

Query: 728  VINKNLIGSVSRRNDEGDGCNSPKMEDWEVQMDLTDDLLHMVFSFLDHVNLCRAAKVCRQ 907
              ++N + S   R++EGDG ++ KMED EV+MDLTDDLLHMVFSFLDH+NLCRAA VC+Q
Sbjct: 130  SDDENPLDSNDGRDEEGDGFSTSKMEDLEVRMDLTDDLLHMVFSFLDHINLCRAAIVCKQ 189

Query: 908  WRTAGAHEDFWRILNFENRNISVLQFEDMCRRYPKATQVNINGAPAIHLLAMKAISSLRN 1087
            WR   +HEDFWR LNFENRNIS  QFEDMCRRYP AT+VNI GAP+IH L M A+SSLRN
Sbjct: 190  WRAGSSHEDFWRCLNFENRNISEEQFEDMCRRYPNATEVNIFGAPSIHSLVMTAMSSLRN 249

Query: 1088 LEVLILGKGQLGETFFQDLIGCQKLRSLIVNDATLGNGIQEIPIYHDQLCHLQIVKCRLL 1267
            LE L LGKG LG+TFFQ L  C  L+ L+VNDATLGNGIQEIPIYHD+L HLQI KCR+L
Sbjct: 250  LETLTLGKGTLGDTFFQALADCYMLKRLLVNDATLGNGIQEIPIYHDRLHHLQITKCRVL 309

Query: 1268 RISVRCPQLQTLSLKRSSMAHAALN 1342
            RISVRCPQL+TLSLKRSSMAHA LN
Sbjct: 310  RISVRCPQLETLSLKRSSMAHAVLN 334


>ref|XP_002516134.1| conserved hypothetical protein [Ricinus communis]
            gi|223544620|gb|EEF46136.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 997

 Score =  325 bits (832), Expect = 2e-86
 Identities = 176/301 (58%), Positives = 209/301 (69%), Gaps = 5/301 (1%)
 Frame = +2

Query: 455  SSNAQGVMEVNLNLGLGDGPSSAAVALG--REGLDGDSHNKRPKVHSFSLDSVWPFASVD 628
            S   QG   ++ +       S+ AV  G   E  D D HNKR KV+S S    +  A   
Sbjct: 72   SWQVQGESSISNSSSCSVAVSAGAVVTGSGNETCDRDMHNKRAKVYSASRACHYMTAMSS 131

Query: 629  SDYNINGLLGRDYNINRSSF---GNEIHYLSPILNDVINKNLIGSVSRRNDEGDGCNSPK 799
               N +    RD+N+N+SS     NEI Y + + N+   +N   S   R D+GD   + K
Sbjct: 132  DAGNPSSSSDRDFNLNQSSSVPARNEIFYHNFMWNNSSEENPCDSGGGR-DDGDESGTSK 190

Query: 800  MEDWEVQMDLTDDLLHMVFSFLDHVNLCRAAKVCRQWRTAGAHEDFWRILNFENRNISVL 979
             ED EV+MDLTDDLLHMVFSFLDH+NLCRAA VCRQWR A AHEDFWR LNFENRNIS+ 
Sbjct: 191  SEDLEVRMDLTDDLLHMVFSFLDHLNLCRAAMVCRQWRAASAHEDFWRCLNFENRNISIE 250

Query: 980  QFEDMCRRYPKATQVNINGAPAIHLLAMKAISSLRNLEVLILGKGQLGETFFQDLIGCQK 1159
            QF+DMCRRYP AT+VNI  AP IHLL MKA+SSLRNLEVL LG+GQLG+ FF  L  C  
Sbjct: 251  QFDDMCRRYPNATEVNIYSAPNIHLLVMKALSSLRNLEVLTLGRGQLGDPFFHALADCSM 310

Query: 1160 LRSLIVNDATLGNGIQEIPIYHDQLCHLQIVKCRLLRISVRCPQLQTLSLKRSSMAHAAL 1339
            L+SL VNDATLGNG+ EIPI HD+L HLQ++KCR++RISVRCPQL+TLSLKRS+MA A L
Sbjct: 311  LKSLYVNDATLGNGVHEIPINHDRLRHLQLIKCRVVRISVRCPQLETLSLKRSNMAQAVL 370

Query: 1340 N 1342
            N
Sbjct: 371  N 371


>ref|XP_002309467.1| f-box family protein [Populus trichocarpa]
            gi|222855443|gb|EEE92990.1| f-box family protein [Populus
            trichocarpa]
          Length = 895

 Score =  323 bits (828), Expect = 6e-86
 Identities = 177/291 (60%), Positives = 203/291 (69%), Gaps = 6/291 (2%)
 Frame = +2

Query: 488  LNLGLGDGPSSA---AVALGREGLDGDSHNKRPKVHSFSLDSVWPFASVDSDYNINGLLG 658
            L  G   G SSA   A   G  G D DSHNKR KV+S+S D  +         N      
Sbjct: 49   LGRGENSGSSSAVAEAAGSGNGGCDRDSHNKRAKVYSYSNDCHYAAVMASDAGNSTSSAD 108

Query: 659  RDYNINRSSF---GNEIHYLSPILNDVINKNLIGSVSRRNDEGDGCNSPKMEDWEVQMDL 829
            R   +++SS     NEI Y + + N+  + N   S   R D+GD   + K ED EV+MDL
Sbjct: 109  RHLGLSQSSSIPSNNEIFYHNFMWNNNSDDNPFDSNGAR-DDGDDSGTSKSEDLEVRMDL 167

Query: 830  TDDLLHMVFSFLDHVNLCRAAKVCRQWRTAGAHEDFWRILNFENRNISVLQFEDMCRRYP 1009
            TDDLLHMVFSFLD +NLCRAA VCRQWR A AHEDFWR LNFENRNISV QFEDM RRYP
Sbjct: 168  TDDLLHMVFSFLDPINLCRAAMVCRQWRAASAHEDFWRCLNFENRNISVEQFEDMSRRYP 227

Query: 1010 KATQVNINGAPAIHLLAMKAISSLRNLEVLILGKGQLGETFFQDLIGCQKLRSLIVNDAT 1189
             AT+VNI GAPAIHLL MKA+ SLRNLE L +GKGQLG+ FF  L  C  L+SL VNDAT
Sbjct: 228  NATEVNIYGAPAIHLLVMKALFSLRNLETLTVGKGQLGDPFFGALGDCIMLKSLNVNDAT 287

Query: 1190 LGNGIQEIPIYHDQLCHLQIVKCRLLRISVRCPQLQTLSLKRSSMAHAALN 1342
            LG+GIQEIPI HD+LCHLQ+ KCR++RISVRCPQL+TLSLKRS+MA A LN
Sbjct: 288  LGSGIQEIPINHDRLCHLQLTKCRVMRISVRCPQLETLSLKRSNMAQAVLN 338


>ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|222865630|gb|EEF02761.1|
            predicted protein [Populus trichocarpa]
          Length = 957

 Score =  315 bits (807), Expect = 2e-83
 Identities = 173/288 (60%), Positives = 202/288 (70%), Gaps = 6/288 (2%)
 Frame = +2

Query: 497  GLGDGPSSA---AVALGREGLDGDSHNKRPKVHSFSLDSVWPFASVDSDYNINGLLGRDY 667
            G   G SSA   A   G+E  D D+HNKR KV+S S DS +         +      RD 
Sbjct: 48   GESSGSSSAVAEAEGSGKEKCDRDAHNKRAKVYSCSNDSHYAAVMSSDVGDSTSSADRDL 107

Query: 668  NINRSSF---GNEIHYLSPILNDVINKNLIGSVSRRNDEGDGCNSPKMEDWEVQMDLTDD 838
             + +SS     NEI Y + + N+  ++N   S   R D GD       ED +V+MDLTDD
Sbjct: 108  GLTQSSSISSNNEICYHNFMWNNNSDENPFDSSGGR-DGGDDSVISNSEDLDVRMDLTDD 166

Query: 839  LLHMVFSFLDHVNLCRAAKVCRQWRTAGAHEDFWRILNFENRNISVLQFEDMCRRYPKAT 1018
            LLHMVFSFLDH+NLCRAA VCRQW+ A AHEDFWR L+FENRNISV QFEDM RRYP AT
Sbjct: 167  LLHMVFSFLDHINLCRAAMVCRQWQAASAHEDFWRCLDFENRNISVEQFEDMSRRYPNAT 226

Query: 1019 QVNINGAPAIHLLAMKAISSLRNLEVLILGKGQLGETFFQDLIGCQKLRSLIVNDATLGN 1198
            +VNI GAP+I LL MKA+SSLRNLE L LGKGQLG+ FF  L  C  L++L VNDATLGN
Sbjct: 227  EVNIYGAPSIQLLVMKAVSSLRNLESLTLGKGQLGDPFFHALGDCSMLKNLNVNDATLGN 286

Query: 1199 GIQEIPIYHDQLCHLQIVKCRLLRISVRCPQLQTLSLKRSSMAHAALN 1342
            GIQEIPI HD+LCHLQ+ KCR++RISVRCPQL+TLSLKRS+MA A LN
Sbjct: 287  GIQEIPINHDRLCHLQLTKCRVMRISVRCPQLETLSLKRSNMAQAVLN 334


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