BLASTX nr result

ID: Panax21_contig00011295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011295
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis v...    75   7e-12
emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera]    73   3e-11
ref|XP_003529800.1| PREDICTED: protein TIF31 homolog [Glycine max]     65   4e-09
ref|XP_002517675.1| eukaryotic translation initiation factor 3 s...    65   6e-09
ref|XP_003533069.1| PREDICTED: uncharacterized protein LOC100801...    64   1e-08

>ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1702

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/52 (73%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = -2

Query: 514  SNEQLKSVDVK-NKQGDGEGFVVVTKRRRNRQNFTSGVNGMYNQQSISASVR 362
            S+ Q    DV  NK GDGEGF VVTKRRRNRQ+FT+GVNG+YNQQSI ASVR
Sbjct: 1651 SDSQQAKPDVNANKNGDGEGFTVVTKRRRNRQHFTNGVNGLYNQQSICASVR 1702


>emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera]
          Length = 1658

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/52 (71%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = -2

Query: 514  SNEQLKSVDVK-NKQGDGEGFVVVTKRRRNRQNFTSGVNGMYNQQSISASVR 362
            S+ Q    DV  +K GDGEGF VVTKRRRNRQ+FT+GVNG+YNQQSI ASVR
Sbjct: 1607 SDSQQAKPDVNTSKNGDGEGFTVVTKRRRNRQHFTNGVNGLYNQQSICASVR 1658


>ref|XP_003529800.1| PREDICTED: protein TIF31 homolog [Glycine max]
          Length = 1676

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = -2

Query: 514  SNEQLKSVDVKNKQGDGEGFVVVTKRRRNRQNFTSGVNGMYNQQSISASVR 362
            S+EQ K    + K GDGEGF+VV+KRR+NRQ  T+GV  +YNQQSI ASVR
Sbjct: 1626 SDEQEKLGVTEKKNGDGEGFIVVSKRRKNRQKITNGVTELYNQQSICASVR 1676


>ref|XP_002517675.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223543307|gb|EEF44839.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1454

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -2

Query: 517  GSNEQLKSVDV-KNKQGDGEGFVVVTKRRRNRQNFTSGVNGMYNQQSISASVR 362
            G NEQ K+ DV K K GD EGF+VV  RRRNRQ F++GV  +YNQQSI ASVR
Sbjct: 1403 GDNEQSKTTDVNKKKNGDNEGFIVVRNRRRNRQ-FSNGVTELYNQQSICASVR 1454


>ref|XP_003533069.1| PREDICTED: uncharacterized protein LOC100801625 [Glycine max]
          Length = 1640

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = -2

Query: 484  KNKQGDGEGFVVVTKRRRNRQNFTSGVNGMYNQQSISASVR 362
            +NK GDGEGF+VV+KRR+NRQ  T+GV  +YNQQSI ASVR
Sbjct: 1600 ENKNGDGEGFIVVSKRRKNRQKITNGVTELYNQQSICASVR 1640


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