BLASTX nr result

ID: Panax21_contig00011291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011291
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437934.1| hypothetical protein SORBIDRAFT_10g005066 [S...    63   5e-08
ref|XP_002438922.1| hypothetical protein SORBIDRAFT_10g028330 [S...    59   1e-06
dbj|BAJ91496.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06
gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]         56   9e-06
ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea ma...    56   9e-06

>ref|XP_002437934.1| hypothetical protein SORBIDRAFT_10g005066 [Sorghum bicolor]
           gi|241916157|gb|EER89301.1| hypothetical protein
           SORBIDRAFT_10g005066 [Sorghum bicolor]
          Length = 553

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
 Frame = +2

Query: 164 VHANIPSKVTEADLERLRTRCHIPDTHLVRIPRSGERMYQR-PEGWMAVTTTILEKGIWF 340
           V   I S +T+ +L+ + ++  +P+ +   +P   +R     P G + V    LE G+  
Sbjct: 37  VAERIASSLTQEELDAICSKYGVPEQYSAVLPAGHQRACSPLPPGAICVNEHALEAGMRV 96

Query: 341 PLHAXXXXXXXXXXXXXAQLMPNSYIHILAFIALCHKLGVEPALDFFFTVYKVGQSREKG 520
           PLHA              Q+ PN +  +  FI L HK GV P+L  F   + +   R KG
Sbjct: 97  PLHAFFCEVLAHFGVAPIQIAPNGWRAMAGFIVLSHKAGVAPSLPVFRHFFSLCGFRFKG 156

Query: 521 FKTISKHSSKTGEKFERRSLVNTPSSNKGWHEKWFFVKGP 640
           +    +     G  F+       P S  GW E +FF+K P
Sbjct: 157 WYYF-RGKDVAGALFK-----GMPPSFAGWKEAFFFLKSP 190


>ref|XP_002438922.1| hypothetical protein SORBIDRAFT_10g028330 [Sorghum bicolor]
           gi|241917145|gb|EER90289.1| hypothetical protein
           SORBIDRAFT_10g028330 [Sorghum bicolor]
          Length = 596

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/122 (30%), Positives = 51/122 (41%)
 Frame = +2

Query: 299 MAVTTTILEKGIWFPLHAXXXXXXXXXXXXXAQLMPNSYIHILAFIALCHKLGVEPALDF 478
           M V    LE G+ FPLH              +QL PN++ ++ AF+ LC   GVEP +  
Sbjct: 93  MCVYAAALEAGLRFPLHGFYVRVLRHYCLAPSQLTPNAWTYLAAFVLLCEDAGVEPLVSA 152

Query: 479 FFTVYKVGQSREKGFKTISKHSSKTGEKFERRSLVNTPSSNKGWHEKWFFVKGPEIISLP 658
           F   + V   R  G K +  H  +      RR       S  GW  ++FF+  P      
Sbjct: 153 FRYFFTVCAHRHDG-KPLGCHHFQPYHDGSRRLFTGALPSWSGWKSRFFFLDCPS----- 206

Query: 659 GW 664
           GW
Sbjct: 207 GW 208


>dbj|BAJ91496.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 573

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 16/175 (9%)
 Frame = +2

Query: 167 HANIPSKVTEAD--LERLRTRCHI---------PDTHLVRIPRSGERMYQRPEGWMAVTT 313
           HA +PS+ T+A+  +  LRT+  +         P     R           P G + V  
Sbjct: 23  HAAVPSRDTDAEAFVSSLRTQDEVDALCDKYGVPKEFTARPAGDLRANSTPPPGAICVYA 82

Query: 314 TILEKGIWFPLHAXXXXXXXXXXXXXAQLMPNSYIHILAFIALCHKLGVEPALDF---FF 484
             LE G+  PL               AQL PN +  +  F+ALC   GV P+L     FF
Sbjct: 83  RSLEAGMRLPLQGFFSDVLAHFGIAPAQLTPNGWRAMAGFLALCDYAGVPPSLAVFRRFF 142

Query: 485 TVYKVGQSREKGFKTISKHSSKTGEKFERRSLVNTPSSN--KGWHEKWFFVKGPE 643
            +  + Q  EKG+         +G +F  R L+  P SN    W  ++FF+  PE
Sbjct: 143 VMCSLSQEHEKGWYLFRPRRDSSGLRF--RGLLK-PDSNPIMRWKHEFFFLSSPE 194


>gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]
          Length = 407

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 37/150 (24%), Positives = 63/150 (42%)
 Frame = +2

Query: 191 TEADLERLRTRCHIPDTHLVRIPRSGERMYQRPEGWMAVTTTILEKGIWFPLHAXXXXXX 370
           T+  ++ L  +  +P+ +   +P   +R    P   ++V    LE G+  PLH       
Sbjct: 56  TQGSIDALCRKYGVPEQYSAVLPAGHQRACSPPGSAVSVYAHALEAGMRVPLHGFFCEVL 115

Query: 371 XXXXXXXAQLMPNSYIHILAFIALCHKLGVEPALDFFFTVYKVGQSREKGFKTISKHSSK 550
                  +Q+ PN +  +  F+ L H  GV P+L  F   + +   + KG+    +    
Sbjct: 116 AHFGVAPSQIAPNGWRAMAGFVVLSHSAGVAPSLPVFRHFFSLCAFKLKGWYYF-RGKDA 174

Query: 551 TGEKFERRSLVNTPSSNKGWHEKWFFVKGP 640
            G  F+       P S  GW E +FF+K P
Sbjct: 175 AGLLFK-----GMPLSIAGWKEAFFFLKSP 199


>ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea mays]
           gi|194694258|gb|ACF81213.1| unknown [Zea mays]
           gi|413952966|gb|AFW85615.1| hypothetical protein
           ZEAMMB73_558830 [Zea mays]
          Length = 513

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 37/150 (24%), Positives = 63/150 (42%)
 Frame = +2

Query: 191 TEADLERLRTRCHIPDTHLVRIPRSGERMYQRPEGWMAVTTTILEKGIWFPLHAXXXXXX 370
           T+  ++ L  +  +P+ +   +P   +R    P   ++V    LE G+  PLH       
Sbjct: 56  TQGSIDALCRKYGVPEQYSAVLPAGHQRACSPPGSAVSVYAHALEAGMRVPLHGFFCEVL 115

Query: 371 XXXXXXXAQLMPNSYIHILAFIALCHKLGVEPALDFFFTVYKVGQSREKGFKTISKHSSK 550
                  +Q+ PN +  +  F+ L H  GV P+L  F   + +   + KG+    +    
Sbjct: 116 AHFGVAPSQIAPNGWRAMAGFVVLSHSAGVAPSLPVFRHFFSLCAFKLKGWYYF-RGKDA 174

Query: 551 TGEKFERRSLVNTPSSNKGWHEKWFFVKGP 640
            G  F+       P S  GW E +FF+K P
Sbjct: 175 AGLLFK-----GMPLSIAGWKEAFFFLKSP 199


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