BLASTX nr result

ID: Panax21_contig00011247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011247
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15906.3| unnamed protein product [Vitis vinifera]              386   e-105
ref|XP_002278308.1| PREDICTED: rab3 GTPase-activating protein ca...   386   e-105
ref|XP_002313972.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103
ref|XP_002526620.1| conserved hypothetical protein [Ricinus comm...   379   e-103
ref|XP_004145245.1| PREDICTED: rab3 GTPase-activating protein ca...   372   e-101

>emb|CBI15906.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score =  386 bits (992), Expect = e-105
 Identities = 185/245 (75%), Positives = 210/245 (85%), Gaps = 1/245 (0%)
 Frame = -1

Query: 759 DTHSKTQWDEDCPWSEWYSAEDPLKGFELIAMWSEKTIESSLEMAELENASLHEADKWII 580
           DT +K QWD+DCPWSEWYSAEDP+KGFELIA+WSEK +E+SLEMAELENAS HEA+KWI+
Sbjct: 257 DTRNKAQWDDDCPWSEWYSAEDPIKGFELIALWSEKMVENSLEMAELENASPHEAEKWIV 316

Query: 579 FPIFSPNLTDESKGNTMGFASQLRLLVMALNMSFGAKYMEDFVSVESSGSDTLKSSAVIP 400
           FP  S +L D  + NTMGF+SQL LLV AL+MSF A++MEDFVSVE SGSD LKSS VIP
Sbjct: 317 FPNLSSHLVDGLRENTMGFSSQLHLLVNALDMSFEAQFMEDFVSVEKSGSDNLKSSMVIP 376

Query: 399 PPTVLDRVLKDIFHDG-EQLDFADGEDKSSRIIKGAPLESLFAQFCLHSLWFGDCNIRAI 223
           PPTVLDRVLKD+FHDG E  D    E KSSR IKGAPL SLFAQFCLHSLWFG+CNIRAI
Sbjct: 377 PPTVLDRVLKDLFHDGVESPDLTKAEHKSSRAIKGAPLGSLFAQFCLHSLWFGNCNIRAI 436

Query: 222 AVLWIEFVREVRWCWEESQPLPRMSASGIIDLSTCLVHQKLQMLGICIEKKRQQDQENQD 43
           A LWIEFVREVRWCWEESQPLP M+ASG+IDLSTCL++QKL+ML ICIEKKRQ  ++ QD
Sbjct: 437 ASLWIEFVREVRWCWEESQPLPHMAASGVIDLSTCLINQKLKMLAICIEKKRQLSEDYQD 496

Query: 42  GVGNK 28
            + +K
Sbjct: 497 SIESK 501


>ref|XP_002278308.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit-like
           [Vitis vinifera]
          Length = 891

 Score =  386 bits (992), Expect = e-105
 Identities = 185/245 (75%), Positives = 210/245 (85%), Gaps = 1/245 (0%)
 Frame = -1

Query: 759 DTHSKTQWDEDCPWSEWYSAEDPLKGFELIAMWSEKTIESSLEMAELENASLHEADKWII 580
           DT +K QWD+DCPWSEWYSAEDP+KGFELIA+WSEK +E+SLEMAELENAS HEA+KWI+
Sbjct: 257 DTRNKAQWDDDCPWSEWYSAEDPIKGFELIALWSEKMVENSLEMAELENASPHEAEKWIV 316

Query: 579 FPIFSPNLTDESKGNTMGFASQLRLLVMALNMSFGAKYMEDFVSVESSGSDTLKSSAVIP 400
           FP  S +L D  + NTMGF+SQL LLV AL+MSF A++MEDFVSVE SGSD LKSS VIP
Sbjct: 317 FPNLSSHLVDGLRENTMGFSSQLHLLVNALDMSFEAQFMEDFVSVEKSGSDNLKSSMVIP 376

Query: 399 PPTVLDRVLKDIFHDG-EQLDFADGEDKSSRIIKGAPLESLFAQFCLHSLWFGDCNIRAI 223
           PPTVLDRVLKD+FHDG E  D    E KSSR IKGAPL SLFAQFCLHSLWFG+CNIRAI
Sbjct: 377 PPTVLDRVLKDLFHDGVESPDLTKAEHKSSRAIKGAPLGSLFAQFCLHSLWFGNCNIRAI 436

Query: 222 AVLWIEFVREVRWCWEESQPLPRMSASGIIDLSTCLVHQKLQMLGICIEKKRQQDQENQD 43
           A LWIEFVREVRWCWEESQPLP M+ASG+IDLSTCL++QKL+ML ICIEKKRQ  ++ QD
Sbjct: 437 ASLWIEFVREVRWCWEESQPLPHMAASGVIDLSTCLINQKLKMLAICIEKKRQLSEDYQD 496

Query: 42  GVGNK 28
            + +K
Sbjct: 497 SIESK 501


>ref|XP_002313972.1| predicted protein [Populus trichocarpa] gi|222850380|gb|EEE87927.1|
            predicted protein [Populus trichocarpa]
          Length = 940

 Score =  379 bits (974), Expect = e-103
 Identities = 184/256 (71%), Positives = 214/256 (83%), Gaps = 2/256 (0%)
 Frame = -1

Query: 765  GVDTHSKTQWDEDCPWSEWYSAEDPLKGFELIAMWSEKTIESSLEMAELENASLHEADKW 586
            G +T S++QWD+DCPWSEWYSAEDP+KG EL A WSEKT+ESSLEMAELENAS HEA+KW
Sbjct: 256  GSETRSRSQWDDDCPWSEWYSAEDPVKGLELTATWSEKTVESSLEMAELENASPHEAEKW 315

Query: 585  IIFPIFSPNLTDESKGNTMGFASQLRLLVMALNMSFGAKYMEDFVS-VESSGSDTLKSSA 409
            +I P  SPNL D S+GN +GFASQLRLLV ALNMSF A++MEDFVS VE+ GSD LKSS 
Sbjct: 316  MILPFLSPNL-DSSEGNRIGFASQLRLLVDALNMSFDAQFMEDFVSAVENPGSDNLKSSM 374

Query: 408  VIPPPTVLDRVLKDIFHDGEQLD-FADGEDKSSRIIKGAPLESLFAQFCLHSLWFGDCNI 232
            ++PPPTVLDRV KD+FH+G Q+  FA GE K SR IKGAP  SLFAQFCLH+LW G CNI
Sbjct: 375  IVPPPTVLDRVFKDLFHEGSQVAAFAKGEHKISRAIKGAPFGSLFAQFCLHALWVGTCNI 434

Query: 231  RAIAVLWIEFVREVRWCWEESQPLPRMSASGIIDLSTCLVHQKLQMLGICIEKKRQQDQE 52
            RAIAVLWIEF+REVRWCWEESQPLP+M A+G IDLSTCL++QKLQML ICIEKK + +++
Sbjct: 435  RAIAVLWIEFIREVRWCWEESQPLPKMQANGSIDLSTCLINQKLQMLAICIEKKCEMNED 494

Query: 51   NQDGVGNKEHNSARVE 4
             QD VG+ EH    +E
Sbjct: 495  FQDCVGSNEHTYDHME 510


>ref|XP_002526620.1| conserved hypothetical protein [Ricinus communis]
            gi|223534060|gb|EEF35779.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 946

 Score =  379 bits (973), Expect = e-103
 Identities = 179/253 (70%), Positives = 215/253 (84%), Gaps = 1/253 (0%)
 Frame = -1

Query: 759  DTHSKTQWDEDCPWSEWYSAEDPLKGFELIAMWSEKTIESSLEMAELENASLHEADKWII 580
            DT + +QWD+DCPWSEWYSAEDP+KG ELIA WSEK +ESSLEMAE+ENAS H+A+KW+I
Sbjct: 265  DTRNASQWDDDCPWSEWYSAEDPVKGLELIATWSEKMVESSLEMAEIENASPHDAEKWMI 324

Query: 579  FPIFSPNLTDESKGNTMGFASQLRLLVMALNMSFGAKYMEDFVSVESSGSDTLKSSAVIP 400
             PI SPNL D S+GN +GFASQLRLLV AL+MSF A++MEDFVSVE+ GSD LK+S V+P
Sbjct: 325  LPILSPNL-DSSEGNRIGFASQLRLLVNALDMSFAAQFMEDFVSVENLGSDNLKASLVVP 383

Query: 399  PPTVLDRVLKDIFHDGEQL-DFADGEDKSSRIIKGAPLESLFAQFCLHSLWFGDCNIRAI 223
            PPTV+DRV KD+FH+G QL DFA GE KSSR +KGAPLESLFAQFCLH LW G+CNIRAI
Sbjct: 384  PPTVMDRVFKDLFHEGSQLPDFAAGEHKSSRAVKGAPLESLFAQFCLHCLWIGNCNIRAI 443

Query: 222  AVLWIEFVREVRWCWEESQPLPRMSASGIIDLSTCLVHQKLQMLGICIEKKRQQDQENQD 43
            AVLW+EF+REVRWCWEESQPLP++  +G IDLSTCL+HQKLQML ICIEKK + +++ QD
Sbjct: 444  AVLWVEFIREVRWCWEESQPLPKVPVNGSIDLSTCLIHQKLQMLAICIEKKCELNEDFQD 503

Query: 42   GVGNKEHNSARVE 4
             V + +   A ++
Sbjct: 504  CVESNDQAYADIK 516


>ref|XP_004145245.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit-like
            [Cucumis sativus] gi|449515010|ref|XP_004164543.1|
            PREDICTED: rab3 GTPase-activating protein catalytic
            subunit-like [Cucumis sativus]
          Length = 943

 Score =  372 bits (954), Expect = e-101
 Identities = 174/257 (67%), Positives = 215/257 (83%), Gaps = 2/257 (0%)
 Frame = -1

Query: 780  DSSDSGVD-THSKTQWDEDCPWSEWYSAEDPLKGFELIAMWSEKTIESSLEMAELENASL 604
            +S++   D TH K QWD+DCPWSEWYS+EDP+KGFELIA WSEK IESSLEMAELEN+S 
Sbjct: 252  ESAEENADGTHGKVQWDDDCPWSEWYSSEDPVKGFELIASWSEKMIESSLEMAELENSSP 311

Query: 603  HEADKWIIFPIFSPNLTDESKGNTMGFASQLRLLVMALNMSFGAKYMEDFVSVESSGSDT 424
            HEA KWI+FPI SPN+TD + GN +GF+SQ+ LL+ AL+MSF A++MEDFVSVE+ GSD 
Sbjct: 312  HEAKKWILFPILSPNITDSTMGNRVGFSSQMYLLIDALDMSFQAQFMEDFVSVENPGSDN 371

Query: 423  LKSSAVIPPPTVLDRVLKDIFHDGEQLD-FADGEDKSSRIIKGAPLESLFAQFCLHSLWF 247
            LKSS V+PPPTV+DRVLK++FH+G++   FA GE ++S+ IK AP++SLFAQFCLH LWF
Sbjct: 372  LKSSTVVPPPTVVDRVLKELFHEGKKFHYFAKGEHRNSQAIKAAPVDSLFAQFCLHVLWF 431

Query: 246  GDCNIRAIAVLWIEFVREVRWCWEESQPLPRMSASGIIDLSTCLVHQKLQMLGICIEKKR 67
            G+CNIRAIA LW+EFVREVRWCWEE QPLPRM  S  IDLS+CL++QKLQML ICIE+K 
Sbjct: 432  GNCNIRAIATLWVEFVREVRWCWEEVQPLPRMPISSSIDLSSCLINQKLQMLAICIERKH 491

Query: 66   QQDQENQDGVGNKEHNS 16
            Q  +E QD +G+++  S
Sbjct: 492  QSIEEFQDCLGSQDPES 508


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