BLASTX nr result

ID: Panax21_contig00011233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011233
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312979.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_003531414.1| PREDICTED: transcription factor bHLH121-like...   115   5e-24
ref|XP_002277206.2| PREDICTED: transcription factor bHLH121-like...   112   2e-23
emb|CAN74571.1| hypothetical protein VITISV_018451 [Vitis vinifera]   112   2e-23
ref|XP_002306170.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23

>ref|XP_002312979.1| predicted protein [Populus trichocarpa] gi|222849387|gb|EEE86934.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/95 (60%), Positives = 71/95 (74%)
 Frame = -3

Query: 357 LQPYPFFGNQNPALVPNPCSTFVPYLTPNTIIERQSAHYXXXXXXXXXXXXXXSKQDSRN 178
           +QPYPF+GNQNPA++ NPCSTFVPY+ PNT+ ++QSA +               KQDS+N
Sbjct: 142 MQPYPFYGNQNPAVIHNPCSTFVPYIAPNTLFDQQSAQHVSSLAQSASRSHVSVKQDSKN 201

Query: 177 RSSDQGESKTDKYEDSNDVATELELKTPGSTADQD 73
           +SS  GESK +K +DSNDV T+LELKTPGSTADQD
Sbjct: 202 KSS--GESKVEKSKDSNDVTTDLELKTPGSTADQD 234


>ref|XP_003531414.1| PREDICTED: transcription factor bHLH121-like [Glycine max]
          Length = 282

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/95 (57%), Positives = 69/95 (72%)
 Frame = -3

Query: 357 LQPYPFFGNQNPALVPNPCSTFVPYLTPNTIIERQSAHYXXXXXXXXXXXXXXSKQDSRN 178
           +QPYPFF NQ+PA++ NPCST+VPYL PNTI+E+QS  Y               KQ+S++
Sbjct: 141 MQPYPFFANQHPAVISNPCSTYVPYLAPNTIVEQQSTQYVSPPLHPCGRSNVSGKQESKS 200

Query: 177 RSSDQGESKTDKYEDSNDVATELELKTPGSTADQD 73
           +SS   ESK +K EDSNDV T+LELKTPGS+ADQD
Sbjct: 201 KSS--RESKAEKNEDSNDVTTDLELKTPGSSADQD 233


>ref|XP_002277206.2| PREDICTED: transcription factor bHLH121-like [Vitis vinifera]
           gi|297744660|emb|CBI37922.3| unnamed protein product
           [Vitis vinifera]
          Length = 329

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/95 (57%), Positives = 68/95 (71%)
 Frame = -3

Query: 357 LQPYPFFGNQNPALVPNPCSTFVPYLTPNTIIERQSAHYXXXXXXXXXXXXXXSKQDSRN 178
           +QPYPFFG+QN  ++PNPCSTFVPY TPNT+IE QS  +              SKQDS+N
Sbjct: 186 MQPYPFFGSQNTGIIPNPCSTFVPYFTPNTLIEPQSTQHVSPPMQPGSTSNISSKQDSKN 245

Query: 177 RSSDQGESKTDKYEDSNDVATELELKTPGSTADQD 73
            S   GESK++K EDS DVAT+L+LKTPGS +DQ+
Sbjct: 246 ES--PGESKSEKGEDSTDVATDLQLKTPGSKSDQE 278


>emb|CAN74571.1| hypothetical protein VITISV_018451 [Vitis vinifera]
          Length = 378

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/95 (57%), Positives = 68/95 (71%)
 Frame = -3

Query: 357 LQPYPFFGNQNPALVPNPCSTFVPYLTPNTIIERQSAHYXXXXXXXXXXXXXXSKQDSRN 178
           +QPYPFFG+QN  ++PNPCSTFVPY TPNT+IE QS  +              SKQDS+N
Sbjct: 235 MQPYPFFGSQNTGIIPNPCSTFVPYFTPNTLIEPQSTQHVSPPMQPGSTSNISSKQDSKN 294

Query: 177 RSSDQGESKTDKYEDSNDVATELELKTPGSTADQD 73
            S   GESK++K EDS DVAT+L+LKTPGS +DQ+
Sbjct: 295 ES--PGESKSEKGEDSTDVATDLQLKTPGSKSDQE 327


>ref|XP_002306170.1| predicted protein [Populus trichocarpa] gi|222849134|gb|EEE86681.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/95 (55%), Positives = 67/95 (70%)
 Frame = -3

Query: 357 LQPYPFFGNQNPALVPNPCSTFVPYLTPNTIIERQSAHYXXXXXXXXXXXXXXSKQDSRN 178
           +QPYPFFGNQNPA++ NPCSTFVP + PNT++++QSA +               +QD +N
Sbjct: 180 IQPYPFFGNQNPAVIHNPCSTFVPCMAPNTLVDQQSAQHVSSLSQPASRSHVSGEQDLKN 239

Query: 177 RSSDQGESKTDKYEDSNDVATELELKTPGSTADQD 73
           + S  GE K +K E SNDV T+LELKTPGSTADQD
Sbjct: 240 KPS--GECKIEKSEGSNDVTTDLELKTPGSTADQD 272


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