BLASTX nr result

ID: Panax21_contig00011198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011198
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305282.1| 4-coumarate-coa ligase [Populus trichocarpa]...   330   3e-88
ref|XP_002523698.1| AMP dependent CoA ligase, putative [Ricinus ...   326   6e-87
ref|XP_002329323.1| 4-coumarate-coa ligase [Populus trichocarpa]...   325   1e-86
dbj|BAJ33700.1| unnamed protein product [Thellungiella halophila]     323   3e-86
ref|NP_192425.1| 4-coumarate--CoA ligase-like 7 [Arabidopsis tha...   323   3e-86

>ref|XP_002305282.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|222848246|gb|EEE85793.1| 4-coumarate-coa ligase
           [Populus trichocarpa]
          Length = 543

 Score =  330 bits (846), Expect = 3e-88
 Identities = 172/264 (65%), Positives = 200/264 (75%), Gaps = 2/264 (0%)
 Frame = -3

Query: 786 MEKSGYGQDGIYRSLRPPLILPRDPNLSIISFLFRNSSSLPNKYALIDADSGETLTFSHL 607
           MEKSGYG+DGIYRSLRP L+LP+DPNLS++SFLFRNS+S P+K ALIDAD   TL+FS L
Sbjct: 1   MEKSGYGRDGIYRSLRPKLVLPKDPNLSLVSFLFRNSNSYPHKPALIDADLSITLSFSEL 60

Query: 606 KSIVFKVSNGLHQLGIQKNDVVLIFAPNSIQFPLCFFXXXXXXXXATTVNPSYTVPEISK 427
           KSIV KV++GL  LGI KNDVVLIFAPNS QFP+CF         ATT NP YT  E+SK
Sbjct: 61  KSIVIKVAHGLLNLGISKNDVVLIFAPNSYQFPICFLAITSTGAIATTANPLYTTSELSK 120

Query: 426 QIKDCNPKIIITVPELWGKVKGFNLSVVILGSEKSFEGFESNSRITLFTDLVKNNGSVSN 247
           QIKD NPK+IITVPELW KVKGFNL  V LG ++     ES SRIT F  LV   GS S 
Sbjct: 121 QIKDSNPKLIITVPELWDKVKGFNLPAVFLGPKRVSLPLESGSRITSFDSLVGLGGSNSQ 180

Query: 246 LP--KISSNDTAALLYSSGTTGNSKGVILSHRNFIVAALMLSSDQDLTGEVDSVYLCVVP 73
            P   +  +D + LLYSSGTTG SKGVIL+H NFI A+LM++ DQ + GE+  V+LC +P
Sbjct: 181 FPSSNVKQSDISTLLYSSGTTGVSKGVILTHGNFIAASLMVTMDQAMAGEMHDVFLCFLP 240

Query: 72  MFHVFGLALITFGQLQRGNAVVSM 1
           MFHVFGLA+IT+ QLQ GNAVVSM
Sbjct: 241 MFHVFGLAVITYSQLQMGNAVVSM 264


>ref|XP_002523698.1| AMP dependent CoA ligase, putative [Ricinus communis]
           gi|223537002|gb|EEF38638.1| AMP dependent CoA ligase,
           putative [Ricinus communis]
          Length = 542

 Score =  326 bits (835), Expect = 6e-87
 Identities = 171/264 (64%), Positives = 202/264 (76%), Gaps = 2/264 (0%)
 Frame = -3

Query: 786 MEKSGYGQDGIYRSLRPPLILPRDPNLSIISFLFRNSSSLPNKYALIDADSGETLTFSHL 607
           MEKSGYG+DGIYRSLRP L+LP+DPNLS++SFLFRN +S P+K ALIDAD  +TL+FS L
Sbjct: 1   MEKSGYGRDGIYRSLRPLLVLPKDPNLSMVSFLFRNCNSYPHKPALIDADLSKTLSFSQL 60

Query: 606 KSIVFKVSNGLHQLGIQKNDVVLIFAPNSIQFPLCFFXXXXXXXXATTVNPSYTVPEISK 427
           KSIV KVS+GL +LGI KNDVVLIFAPNS QFP+CF         ATT NP YT  EISK
Sbjct: 61  KSIVIKVSHGLLKLGISKNDVVLIFAPNSYQFPICFLAITSIGAIATTANPLYTTTEISK 120

Query: 426 QIKDCNPKIIITVPELWGKVKGFNLSVVILGSEKSFEGFESNSRITLFTDLVKNNGSVSN 247
           QIKD NPK++ITVPELW KVK FNL  V LG+++S    E NSRI  F  LV+  GS S 
Sbjct: 121 QIKDSNPKLVITVPELWNKVKDFNLPAVFLGAKESLL-IEPNSRIKSFDHLVELGGSNSE 179

Query: 246 LPKIS--SNDTAALLYSSGTTGNSKGVILSHRNFIVAALMLSSDQDLTGEVDSVYLCVVP 73
            P I+    D A LLYSSGTTG SKGVIL+H NFI A+ M++ DQ++ GE+ +V+LC +P
Sbjct: 180 FPTINVKQTDIATLLYSSGTTGISKGVILTHGNFIAASQMITMDQEIAGELHNVFLCFLP 239

Query: 72  MFHVFGLALITFGQLQRGNAVVSM 1
           MFHVFGLA+I + QLQ GNAVVSM
Sbjct: 240 MFHVFGLAVIAYSQLQTGNAVVSM 263


>ref|XP_002329323.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|224127626|ref|XP_002329324.1| acyl:coa ligase
           [Populus trichocarpa] gi|222870777|gb|EEF07908.1|
           4-coumarate-coa ligase [Populus trichocarpa]
           gi|222870778|gb|EEF07909.1| acyl:coa ligase [Populus
           trichocarpa]
          Length = 543

 Score =  325 bits (833), Expect = 1e-86
 Identities = 170/264 (64%), Positives = 198/264 (75%), Gaps = 2/264 (0%)
 Frame = -3

Query: 786 MEKSGYGQDGIYRSLRPPLILPRDPNLSIISFLFRNSSSLPNKYALIDADSGETLTFSHL 607
           MEKSGYG+DGIYRSLRP L+LPRD NLS++SFLFRNS+S P+K ALIDAD   TL+FS L
Sbjct: 1   MEKSGYGRDGIYRSLRPTLVLPRDSNLSLVSFLFRNSNSYPHKPALIDADLSITLSFSEL 60

Query: 606 KSIVFKVSNGLHQLGIQKNDVVLIFAPNSIQFPLCFFXXXXXXXXATTVNPSYTVPEISK 427
           KSIV K ++GL  LGI KNDV+LIFAPNS QFP CF         ATT NP YT  E+SK
Sbjct: 61  KSIVIKFAHGLLNLGISKNDVILIFAPNSYQFPTCFLAITSIGAVATTANPLYTTSELSK 120

Query: 426 QIKDCNPKIIITVPELWGKVKGFNLSVVILGSEKSFEGFESNSRITLFTDLVKNNGSVSN 247
           QIKD NPK++ITVPELW KVKGFNL  V LG ++     ES SRI  F  LV+  GS S 
Sbjct: 121 QIKDSNPKLVITVPELWDKVKGFNLPAVFLGPKEVSLPLESGSRIRSFHSLVELGGSNSE 180

Query: 246 LP--KISSNDTAALLYSSGTTGNSKGVILSHRNFIVAALMLSSDQDLTGEVDSVYLCVVP 73
            P   +  +D A LLYSSGTTG SKGVIL+H NFI A+LM+S DQ + GE+ +V+LC +P
Sbjct: 181 FPVSDVKQSDIATLLYSSGTTGVSKGVILTHGNFIAASLMVSMDQVMAGEIHNVFLCFLP 240

Query: 72  MFHVFGLALITFGQLQRGNAVVSM 1
           MFHVFGLA+IT+ QLQ GNAVVSM
Sbjct: 241 MFHVFGLAVITYSQLQMGNAVVSM 264


>dbj|BAJ33700.1| unnamed protein product [Thellungiella halophila]
          Length = 543

 Score =  323 bits (829), Expect = 3e-86
 Identities = 164/264 (62%), Positives = 210/264 (79%), Gaps = 2/264 (0%)
 Frame = -3

Query: 786 MEKSGYGQDGIYRSLRPPLILPRDPNLSIISFLFRNSSSLPNKYALIDADSGETLTFSHL 607
           MEKSGYG+DGIYRSLRP L+LP+DPN S++SFLFRN+SS P+K AL+D+DSG+TL+FS L
Sbjct: 1   MEKSGYGRDGIYRSLRPTLVLPKDPNTSLVSFLFRNTSSYPSKPALVDSDSGDTLSFSQL 60

Query: 606 KSIVFKVSNGLHQLGIQKNDVVLIFAPNSIQFPLCFFXXXXXXXXATTVNPSYTVPEISK 427
           KS V ++++G  +LGI++NDVVLIFAPNS QFPLCF          TT NP YT  EISK
Sbjct: 61  KSAVSRLAHGFLRLGIRQNDVVLIFAPNSYQFPLCFLAVSAIGGVFTTANPLYTTSEISK 120

Query: 426 QIKDCNPKIIITVPELWGKVKGFNLSVVILGSEKSFEGFESNSRITLFTDLVKNNGSVSN 247
           QIKD NPKIII+V +L+ K+KGF+L +V+LGS +S +   SNS+I  F ++++ +  VS+
Sbjct: 121 QIKDSNPKIIISVEQLFDKIKGFDLPIVLLGSGESVQVPGSNSKILSFNNVMELSEPVSD 180

Query: 246 LP--KISSNDTAALLYSSGTTGNSKGVILSHRNFIVAALMLSSDQDLTGEVDSVYLCVVP 73
           LP  +I  +DTAALLYSSGTTG SKGV L+H NFI A+LM++ DQDL GE  +V+LC +P
Sbjct: 181 LPTVQIKQSDTAALLYSSGTTGISKGVELTHGNFIAASLMVTMDQDLMGEYHAVFLCFLP 240

Query: 72  MFHVFGLALITFGQLQRGNAVVSM 1
           MFHVFGL +IT+ QLQRGNAV+SM
Sbjct: 241 MFHVFGLTVITYSQLQRGNAVISM 264


>ref|NP_192425.1| 4-coumarate--CoA ligase-like 7 [Arabidopsis thaliana]
           gi|75311763|sp|Q9M0X9.1|4CLL7_ARATH RecName:
           Full=4-coumarate--CoA ligase-like 7; AltName:
           Full=4-coumarate--CoA ligase isoform 6; Short=At4CL6
           gi|7267275|emb|CAB81058.1| 4-coumarate--CoA ligase-like
           protein [Arabidopsis thaliana]
           gi|20258834|gb|AAM13899.1| putative 4-coumarate--CoA
           ligase [Arabidopsis thaliana] gi|21689723|gb|AAM67483.1|
           putative 4-coumarate--CoA ligase [Arabidopsis thaliana]
           gi|29893227|gb|AAP03022.1| 4-coumarate-CoA ligase-like
           protein [Arabidopsis thaliana]
           gi|332657086|gb|AEE82486.1| 4-coumarate--CoA ligase-like
           7 [Arabidopsis thaliana]
          Length = 544

 Score =  323 bits (829), Expect = 3e-86
 Identities = 166/265 (62%), Positives = 209/265 (78%), Gaps = 3/265 (1%)
 Frame = -3

Query: 786 MEKSGYGQDGIYRSLRPPLILPRDPNLSIISFLFRNSSSLPNKYALIDADSGETLTFSHL 607
           MEKSGYG+DGIYRSLRP L+LP+DPN S++SFLFRNSSS P+K A+ D+D+G++LTFS L
Sbjct: 1   MEKSGYGRDGIYRSLRPTLVLPKDPNTSLVSFLFRNSSSYPSKLAIADSDTGDSLTFSQL 60

Query: 606 KSIVFKVSNGLHQLGIQKNDVVLIFAPNSIQFPLCFFXXXXXXXXATTVNPSYTVPEISK 427
           KS V ++++G H+LGI+KNDVVLIFAPNS QFPLCF          TT NP YTV E+SK
Sbjct: 61  KSAVARLAHGFHRLGIRKNDVVLIFAPNSYQFPLCFLAVTAIGGVFTTANPLYTVNEVSK 120

Query: 426 QIKDCNPKIIITVPELWGKVKGFNLSVVILGSEKSFE-GFESNSRITLFTDLVKNNGSVS 250
           QIKD NPKIII+V +L+ K+KGF+L VV+LGS+ + E    SNS+I  F ++++ +  VS
Sbjct: 121 QIKDSNPKIIISVNQLFDKIKGFDLPVVLLGSKDTVEIPPGSNSKILSFDNVMELSEPVS 180

Query: 249 NLP--KISSNDTAALLYSSGTTGNSKGVILSHRNFIVAALMLSSDQDLTGEVDSVYLCVV 76
             P  +I  +DTAALLYSSGTTG SKGV L+H NFI A+LM++ DQDL GE   V+LC +
Sbjct: 181 EYPFVEIKQSDTAALLYSSGTTGTSKGVELTHGNFIAASLMVTMDQDLMGEYHGVFLCFL 240

Query: 75  PMFHVFGLALITFGQLQRGNAVVSM 1
           PMFHVFGLA+IT+ QLQRGNA+VSM
Sbjct: 241 PMFHVFGLAVITYSQLQRGNALVSM 265


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