BLASTX nr result
ID: Panax21_contig00011139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00011139
(656 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800... 231 3e-71
ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783... 224 5e-69
ref|XP_002325202.1| predicted protein [Populus trichocarpa] gi|2... 218 2e-66
ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing... 214 3e-64
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera] 206 1e-60
>ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800468 [Glycine max]
Length = 1100
Score = 231 bits (589), Expect(2) = 3e-71
Identities = 107/143 (74%), Positives = 120/143 (83%), Gaps = 1/143 (0%)
Frame = +3
Query: 231 GCRRACCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPVVLRNHEKNLLSPYSAPSKMGG 410
GCRRACCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCP +LR ++N SPY+ S+
Sbjct: 470 GCRRACCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPALLRGQDQNQFSPYTPRSRGSD 529
Query: 411 IVG-INGAPKRRYRTAGVPYFAFDSDRCRHEIARMIIMHDYPLHIVEHSGFIAFVQNLQP 587
G + APKRRYR+ PY FD DRCRHEIARMIIMHDYPLH+VEH GF+AFVQNLQP
Sbjct: 530 AAGNASSAPKRRYRSPNTPYIIFDQDRCRHEIARMIIMHDYPLHMVEHPGFVAFVQNLQP 589
Query: 588 QFDMVSFNTVQGDCVATFLREKQ 656
QF+MV+FNT+QGDCVAT+L EKQ
Sbjct: 590 QFNMVTFNTIQGDCVATYLMEKQ 612
Score = 63.5 bits (153), Expect(2) = 3e-71
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Frame = +2
Query: 5 NHQLVSVETQPADVEMQPVNVETPINVEP-----QPNKRRKKKSIVWEHFTIENVGAGCR 169
++++V+ P+ + VN ETP+N E QP+KRRKKKSIVWEHFTIE V GCR
Sbjct: 416 HYEIVNASNIPS---YEIVNAETPLNSEEPTPETQPSKRRKKKSIVWEHFTIETVSPGCR 472
Query: 170 RA 175
RA
Sbjct: 473 RA 474
>ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783258 [Glycine max]
Length = 1154
Score = 224 bits (571), Expect(2) = 5e-69
Identities = 104/143 (72%), Positives = 118/143 (82%), Gaps = 1/143 (0%)
Frame = +3
Query: 231 GCRRACCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPVVLRNHEKNLLSPYSAPSKMGG 410
GCRRACC QCKQSFAYSTGSKVAGTSHLKRHIAKGTCP +LR ++N S Y+ S+
Sbjct: 524 GCRRACCMQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPALLRGQDQNQFSSYTPRSRGSD 583
Query: 411 IVG-INGAPKRRYRTAGVPYFAFDSDRCRHEIARMIIMHDYPLHIVEHSGFIAFVQNLQP 587
G + APKRRYR+ PY FD DRCRHEIARMIIMHDYPLH+VEH GF+AFVQNLQP
Sbjct: 584 AAGNASSAPKRRYRSPNTPYIIFDQDRCRHEIARMIIMHDYPLHMVEHPGFVAFVQNLQP 643
Query: 588 QFDMVSFNTVQGDCVATFLREKQ 656
+F+MV+FNT+QGDCVAT+L EKQ
Sbjct: 644 RFNMVTFNTIQGDCVATYLMEKQ 666
Score = 63.2 bits (152), Expect(2) = 5e-69
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Frame = +2
Query: 5 NHQLVSVETQPADVEMQPVNVETPINVEP-----QPNKRRKKKSIVWEHFTIENVGAGCR 169
++++V+ P+ + +N ETP+N E QP+KRRKKKSIVWEHFTIE V GCR
Sbjct: 470 HYEIVNASNIPS---YEIINAETPLNSEEPTPETQPSKRRKKKSIVWEHFTIETVSPGCR 526
Query: 170 RA 175
RA
Sbjct: 527 RA 528
>ref|XP_002325202.1| predicted protein [Populus trichocarpa] gi|222866636|gb|EEF03767.1|
predicted protein [Populus trichocarpa]
Length = 666
Score = 218 bits (554), Expect(2) = 2e-66
Identities = 106/142 (74%), Positives = 118/142 (83%)
Frame = +3
Query: 231 GCRRACCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPVVLRNHEKNLLSPYSAPSKMGG 410
GCRRA C QCKQSFAYSTGSKVAGTSHLKRHIAKGTCP +LRN SP++ M G
Sbjct: 44 GCRRASCNQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPALLRNQ-----SPFTPG--MNG 96
Query: 411 IVGINGAPKRRYRTAGVPYFAFDSDRCRHEIARMIIMHDYPLHIVEHSGFIAFVQNLQPQ 590
++ PKRRYR+ Y +FDSDRCRHEIARM+IMHDYPLH+VEHSGF+AFVQNLQP+
Sbjct: 97 NGSMSDPPKRRYRSPSSAYISFDSDRCRHEIARMMIMHDYPLHMVEHSGFLAFVQNLQPR 156
Query: 591 FDMVSFNTVQGDCVATFLREKQ 656
FDMVSFNTVQGDCVAT+LREKQ
Sbjct: 157 FDMVSFNTVQGDCVATYLREKQ 178
Score = 60.8 bits (146), Expect(2) = 2e-66
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +2
Query: 86 EPQPNKRRKKKSIVWEHFTIENVGAGCRRA 175
E QPNKRRKKKSIVWEHFTIENV GCRRA
Sbjct: 19 ETQPNKRRKKKSIVWEHFTIENVSPGCRRA 48
>ref|XP_003549145.1| PREDICTED: zinc finger BED domain-containing protein 1-like
[Glycine max]
Length = 1038
Score = 214 bits (545), Expect(2) = 3e-64
Identities = 97/141 (68%), Positives = 117/141 (82%)
Frame = +3
Query: 234 CRRACCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPVVLRNHEKNLLSPYSAPSKMGGI 413
CRRA CKQC Q+FAYSTGSKVAGTSHLKRH+AKGTC +LRNH +N L+PY+A ++ G
Sbjct: 425 CRRARCKQCAQTFAYSTGSKVAGTSHLKRHVAKGTCSALLRNHNRNQLTPYAARTRRSGT 484
Query: 414 VGINGAPKRRYRTAGVPYFAFDSDRCRHEIARMIIMHDYPLHIVEHSGFIAFVQNLQPQF 593
+ KR+YR+ +PY FD D+CR+EIARMIIMHDYPLH+VEHSGF+AFVQNLQPQF
Sbjct: 485 GDASSTRKRQYRSPSMPYVIFDQDQCRNEIARMIIMHDYPLHMVEHSGFVAFVQNLQPQF 544
Query: 594 DMVSFNTVQGDCVATFLREKQ 656
M +FN++QGDCVAT+L EKQ
Sbjct: 545 KMETFNSIQGDCVATYLMEKQ 565
Score = 57.4 bits (137), Expect(2) = 3e-64
Identities = 29/44 (65%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Frame = +2
Query: 59 VNVETPIN-----VEPQPNKRRKKKSIVWEHFTIENVGAGCRRA 175
+N ETP+N E QP KRRKKKSIVWEHFTIE V CRRA
Sbjct: 385 INAETPLNNEDCIPEAQPIKRRKKKSIVWEHFTIEAVSPECRRA 428
>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
Length = 1045
Score = 206 bits (524), Expect(2) = 1e-60
Identities = 103/146 (70%), Positives = 113/146 (77%), Gaps = 3/146 (2%)
Frame = +3
Query: 228 AGCRRACCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPVVLRNHEKNLLSPYSAPSKMG 407
AGC RACCKQCK+SFAY TGSK+AGTSHLKRHIA G CPV RN EKN L+PY+ S+ G
Sbjct: 395 AGCTRACCKQCKKSFAYITGSKLAGTSHLKRHIALGICPVSRRNQEKNQLTPYTPASQAG 454
Query: 408 GIVGINGAPKRRYRTAGVPYFA---FDSDRCRHEIARMIIMHDYPLHIVEHSGFIAFVQN 578
APKRRYR G P A FD DRC EIA+MIIMH+YPLHIVEHSGFI FV
Sbjct: 455 FTGNSTDAPKRRYR--GTPVSANIPFDQDRCNQEIAKMIIMHEYPLHIVEHSGFINFVHT 512
Query: 579 LQPQFDMVSFNTVQGDCVATFLREKQ 656
LQPQF+MVSFN++QGDCVA FLREKQ
Sbjct: 513 LQPQFNMVSFNSIQGDCVALFLREKQ 538
Score = 53.5 bits (127), Expect(2) = 1e-60
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +2
Query: 80 NVEPQPNKRRKKKSIVWEHFTIENVGAGCRRA 175
N E Q NKRR+KKSIVWEHFT+E V AGC RA
Sbjct: 369 NSEIQLNKRRRKKSIVWEHFTVETVSAGCTRA 400