BLASTX nr result

ID: Panax21_contig00011137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011137
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing ...   284   3e-74
emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]   281   2e-73
ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus ...   268   1e-69
gb|AFH57270.1| RAV [Gossypium hirsutum]                               265   9e-69
gb|AEZ02303.1| RAV1 [Castanea sativa]                                 264   3e-68

>ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Vitis vinifera]
          Length = 358

 Score =  284 bits (726), Expect = 3e-74
 Identities = 153/256 (59%), Positives = 167/256 (65%), Gaps = 10/256 (3%)
 Frame = +3

Query: 6   LSDTQVDDTETIFLNSHSKTEIVDMLRKHTYNDELEQSKKNRGFQQK----------TVI 155
           LS+T+ DD E  FLNSHSK EIVDMLRKHTYNDELEQSK+N G              T  
Sbjct: 119 LSETEEDDIEAAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYGLDANGKRSRAEGLMTPF 178

Query: 156 FDERILKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSISKGVLLNFEDMSGK 335
             +R+ K+R+QLFEK VTPSDVGKLNRLVIPKQHAEKHFPLQ+G+ SKGVLLNFEDM GK
Sbjct: 179 GSDRVTKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQTGTTSKGVLLNFEDMGGK 238

Query: 336 VWRFRYSYWNSSQSYVLTKGWSRFVKEKCLQAGDIVIFQRSTGPDKQLYIDWKARNGPVT 515
           VWRFRYSYWNSSQSYVLTKGWSRFVKEK L+AGDIV FQRSTG DKQLYIDWKARNGP  
Sbjct: 239 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNGPTN 298

Query: 516 VLGALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKRMREM 695
            +  +                                                GKRM EM
Sbjct: 299 QINPV-----------------EPVEMVRLFGVNIFKVPVNSSVVVANNGSWTGKRMIEM 341

Query: 696 EFLAVDCSKKQRAIDA 743
           E L+ +CSKKQR I A
Sbjct: 342 ELLSFECSKKQRVIGA 357


>emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
          Length = 364

 Score =  281 bits (719), Expect = 2e-73
 Identities = 151/252 (59%), Positives = 165/252 (65%), Gaps = 10/252 (3%)
 Frame = +3

Query: 6   LSDTQVDDTETIFLNSHSKTEIVDMLRKHTYNDELEQSKKNRGFQQK----------TVI 155
           LS+T+ DD E  FLNSHSK EIVDMLRKHTYNDELEQSK+N G              T  
Sbjct: 119 LSETEEDDIEAAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYGLDANGKRSRAEGLMTPF 178

Query: 156 FDERILKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSISKGVLLNFEDMSGK 335
             +R+ K+R+QLFEK VTPSDVGKLNRLVIPKQHAEKHFPLQ+G+ SKGVLLNFEDM GK
Sbjct: 179 GSDRVTKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQTGTTSKGVLLNFEDMGGK 238

Query: 336 VWRFRYSYWNSSQSYVLTKGWSRFVKEKCLQAGDIVIFQRSTGPDKQLYIDWKARNGPVT 515
           VWRFRYSYWNSSQSYVLTKGWSRFVKEK L+AGDIV FQRSTG DKQLYIDWKARNGP  
Sbjct: 239 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYIDWKARNGPTN 298

Query: 516 VLGALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKRMREM 695
            +  +                                                GKRM EM
Sbjct: 299 QINPV-----------------EPVEMVRLFGVNIFKVPVNSSVVVANNGSWTGKRMIEM 341

Query: 696 EFLAVDCSKKQR 731
           E L+ +CSKKQR
Sbjct: 342 ELLSFECSKKQR 353


>ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
           gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1,
           putative [Ricinus communis]
          Length = 371

 Score =  268 bits (686), Expect = 1e-69
 Identities = 156/259 (60%), Positives = 173/259 (66%), Gaps = 16/259 (6%)
 Frame = +3

Query: 15  TQVDDTETIFLNSHSKTEIVDMLRKHTYNDELEQSKKN------RG--FQQKTVIFD--- 161
           ++ D+ ET FLNSHSK EIVDMLRKHTYNDELEQSK+N      RG  FQ +T + +   
Sbjct: 130 SEEDEIETAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYTSNNGRGDKFQNRTNMNNVGL 189

Query: 162 ---ERIL-KARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSIS-KGVLLNFEDM 326
              ERI+ KAR+QLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS S KGVLLNFED+
Sbjct: 190 SGSERIIMKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSNSTKGVLLNFEDI 249

Query: 327 SGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKCLQAGDIVIFQRSTGPDKQLYIDWKARNG 506
           +GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L+AGDIV F +STGPDKQLYIDWK R  
Sbjct: 250 TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVRFLKSTGPDKQLYIDWKVRTL 309

Query: 507 PVTVLGALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKRM 686
             TV   +                                               NGKR+
Sbjct: 310 TPTVSNPVV------------------CSVQPVQMVRLFGVNIFKVPGNSHIEGCNGKRI 351

Query: 687 REMEFLAVDCSKKQRAIDA 743
           REME L++DC KKQR I A
Sbjct: 352 REMELLSLDCIKKQRVIGA 370


>gb|AFH57270.1| RAV [Gossypium hirsutum]
          Length = 357

 Score =  265 bits (678), Expect = 9e-69
 Identities = 152/256 (59%), Positives = 169/256 (66%), Gaps = 10/256 (3%)
 Frame = +3

Query: 6   LSDTQVDDTETIFLNSHSKTEIVDMLRKHTYNDELEQSKKNRGFQQ--KTVIFDER---- 167
           L + + DD +  FLNSHSK EIVDMLRKHTYNDELEQS+++ GF    K ++  E     
Sbjct: 122 LHEMEDDDIQIAFLNSHSKAEIVDMLRKHTYNDELEQSRRSYGFDGNGKRIVRKEDGFGT 181

Query: 168 ---ILKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSIS-KGVLLNFEDMSGK 335
               LKAR+QLFEKAVTPSDVGKLNRLVIPKQHAEK+FPLQSGS S KGVLLNFED++GK
Sbjct: 182 LGFELKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKYFPLQSGSASSKGVLLNFEDVTGK 241

Query: 336 VWRFRYSYWNSSQSYVLTKGWSRFVKEKCLQAGDIVIFQRSTGPDKQLYIDWKARNGPVT 515
           VWRFRYSYWNSSQSYVL KGWSRFVKEK L+AGDIV FQRSTG +KQLYIDWKAR G   
Sbjct: 242 VWRFRYSYWNSSQSYVLIKGWSRFVKEKNLKAGDIVSFQRSTGTEKQLYIDWKARTG--- 298

Query: 516 VLGALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKRMREM 695
            LG+                                                NGKR REM
Sbjct: 299 -LGS-----------------GLENPVQMVRLFGVNIFKMPGSENVGLAGGCNGKRTREM 340

Query: 696 EFLAVDCSKKQRAIDA 743
           E L ++CSKKQR IDA
Sbjct: 341 ELLELECSKKQRVIDA 356


>gb|AEZ02303.1| RAV1 [Castanea sativa]
          Length = 383

 Score =  264 bits (674), Expect = 3e-68
 Identities = 147/259 (56%), Positives = 164/259 (63%), Gaps = 17/259 (6%)
 Frame = +3

Query: 18  QVDDTETIFLNSHSKTEIVDMLRKHTYNDELEQSKKNRGFQQKTVIFDERI--------- 170
           Q DD ET+FLNSHSK EIVDMLRKHTYNDELEQSK+N G         E +         
Sbjct: 139 QEDDIETVFLNSHSKAEIVDMLRKHTYNDELEQSKRNYGLDSTRRSKGESLGHGLLERVN 198

Query: 171 ---LKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ-----SGSISKGVLLNFEDM 326
              +KAR+QLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ     S + SKG+LLNFED+
Sbjct: 199 YYSMKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQNSGSNSTTSSKGLLLNFEDV 258

Query: 327 SGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKCLQAGDIVIFQRSTGPDKQLYIDWKARNG 506
            GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L+AGDIV F RSTGPD QL+I+WKAR G
Sbjct: 259 GGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGPDNQLFIEWKARAG 318

Query: 507 PVTVLGALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGKRM 686
           P +   +                                                 GKRM
Sbjct: 319 PSSSSSS---------------SNPVQMVRLFGVNILKIPGVGGVVESGNIGGCNGGKRM 363

Query: 687 REMEFLAVDCSKKQRAIDA 743
           REM+ LA++CSKKQR + A
Sbjct: 364 REMDLLALECSKKQRIVGA 382


Top