BLASTX nr result

ID: Panax21_contig00011136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011136
         (2155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   238   4e-60
ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   237   8e-60
emb|CBI29756.3| unnamed protein product [Vitis vinifera]              217   9e-54
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...   217   1e-53
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...   199   3e-48

>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
            gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
            [Ricinus communis]
          Length = 1233

 Score =  238 bits (608), Expect = 4e-60
 Identities = 148/341 (43%), Positives = 195/341 (57%), Gaps = 9/341 (2%)
 Frame = -1

Query: 1006 KCPKVNWSQRAKAHANFSSQNKFLSTNFLFSLSTQTPCTEGAMAARLITCQVQNFKRVHS 827
            K PK+NWSQ  KAH NFS Q KFLS+NFL+SL  Q P +EG MA RL TCQ+Q+F+R+ S
Sbjct: 23   KLPKINWSQHDKAHDNFSCQKKFLSSNFLYSLENQKPHSEGVMAMRL-TCQIQSFQRLQS 81

Query: 826  TEVEKVCQALSSIKLSSRNYIKSGRSSPL-----VKDVNKS---LEDXXXXXXXXXSDVN 671
             +VEK   ALS +++S RNY++ G++ PL     ++DV +                  V+
Sbjct: 82   PQVEKAWHALSCLQISCRNYLQPGKTGPLKNANLLQDVGQRPTFCSSSDGGKYSECLHVH 141

Query: 670  KSFNTSDLGIGKS-KCIGSSFPSGTFDVVDSGNAASRQSEGXXXXXXXXXXXXXSGLSSN 494
            ++F+ S     KS + +G+  P       ++GN   RQS+              SG  S+
Sbjct: 142  QNFSESGAKNNKSERYMGNYVPQDNATAAETGNGLQRQSQIKASAANNTESKTFSGSFSD 201

Query: 493  QTVHASPVDGIQNTFSDGIADDDIVENLDVDQIIMEHYQWADTPQPSISKLLPFTPTVIK 314
             +V+ S         +D I DDD++ N+DVDQI+MEH Q   TP  S  K    TPT  K
Sbjct: 202  HSVYTSHNKESAEASTDFIDDDDLLGNIDVDQIVMEHNQSNCTPPNS--KFPSITPTADK 259

Query: 313  DNDARPESTCLPLELCVNCSHGLKLGLCSTAANHLQDMKGMLISISNDLLDNVSDLNPDQ 134
             N AR +   LP ELC NC+HG KLGLC  A NHLQ+MK MLI++SN+LLDN ++L+  Q
Sbjct: 260  HNFARSDEMFLPTELCQNCNHGFKLGLCPEAGNHLQEMKDMLIAVSNELLDNSTNLSSVQ 319

Query: 133  IEKLCQDRXXXXXXXXXXXXXLCVTSLDEERQNSHFSASTA 11
            IEKL QDR             L     D+ERQ SHFSASTA
Sbjct: 320  IEKLRQDRLQLNKQIQQLESYL----RDKERQKSHFSASTA 356


>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
            predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  237 bits (605), Expect = 8e-60
 Identities = 150/341 (43%), Positives = 191/341 (56%), Gaps = 10/341 (2%)
 Frame = -1

Query: 1006 KCPKVNWSQRAKAHANFSSQNKFLSTNFLFSLSTQTPCTEGAMAARLITCQVQNFKRVHS 827
            K PKVNW Q A A  N SS  KFLS NFL+SL +Q P     M+ RL +C VQN +R+ S
Sbjct: 24   KQPKVNWLQHANALDNISSGRKFLSANFLYSLESQKP-----MSMRLSSCDVQNPQRLQS 78

Query: 826  TEVEKVCQALSSIKLSSRNYIKSGRSSPLVKDVNKSLEDXXXXXXXXXSDVNKSF----- 662
            ++VEK   ALS++++SSRNYI+ G++ P VK+V++ L           S  N S      
Sbjct: 79   SQVEKAWHALSTLQISSRNYIRPGQTGP-VKNVSEDLSGNVGQRPTFQSSSNISKYSEGV 137

Query: 661  ----NTSDLGIGKSKCIGSSFPSGTFDVVDSGNAASRQSE-GXXXXXXXXXXXXXSGLSS 497
                N S      +K  G+  P+     V SGN     S+               +G   
Sbjct: 138  YAQKNLSGKNSEAAKHTGNVIPADNASHVQSGNNQGWPSDIKASSGVNTNQSNVLAGSFV 197

Query: 496  NQTVHASPVDGIQNTFSDGIADDDIVENLDVDQIIMEHYQWADTPQPSISKLLPFTPTVI 317
            N TV          T +D I DDD++E++DVDQI+MEHYQ   TPQP+ISK  P TPT  
Sbjct: 198  NHTVQTCQTKEFVETSADYIDDDDLIESIDVDQIVMEHYQATCTPQPAISKFPPITPTAD 257

Query: 316  KDNDARPESTCLPLELCVNCSHGLKLGLCSTAANHLQDMKGMLISISNDLLDNVSDLNPD 137
            +++  RPE   +P ELC NCSHG KLGLC  AA HLQ+MK MLI++SNDLLDN ++L+  
Sbjct: 258  QNSFIRPEEISVPPELCSNCSHGFKLGLCPEAAKHLQEMKDMLIAVSNDLLDNAAELSQA 317

Query: 136  QIEKLCQDRXXXXXXXXXXXXXLCVTSLDEERQNSHFSAST 14
            QI+KL QDR             L     DEERQ SHFSAST
Sbjct: 318  QIDKLRQDRLQLNKQIQQLEKYL----RDEERQKSHFSAST 354


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  217 bits (553), Expect = 9e-54
 Identities = 134/301 (44%), Positives = 170/301 (56%), Gaps = 12/301 (3%)
 Frame = -1

Query: 871 RLITCQVQNFKRVHSTEVEKVCQALSSIKLSSRNYIKSGRSSPLVKDVNKSL-EDXXXXX 695
           R + CQ+Q+ +R+ S +VEK   ALSS+KLSSRNY K G+ +PL+KD +     D     
Sbjct: 39  RPMICQIQHIQRLQSLQVEKAWGALSSLKLSSRNYSKPGKMAPLLKDASVEFPRDVRKCN 98

Query: 694 XXXXSDVNKSF---NTSDLGIGKSK--------CIGSSFPSGTFDVVDSGNAASRQSEGX 548
                + N  +   N     +G++         C G+SF SG+    ++G     Q+E  
Sbjct: 99  LQSSHNTNNQYLEHNLPHQNLGETNSSYSETASCRGNSFRSGSACAENAGREGG-QNETK 157

Query: 547 XXXXXXXXXXXXSGLSSNQTVHASPVDGIQNTFSDGIADDDIVENLDVDQIIMEHYQWAD 368
                          S    VH   V  +   F +G  DDDI+E++DVDQI+MEHYQ   
Sbjct: 158 PSMLYNSHIQVVGQSSGTCNVHTGQVKELVGAFPNGTDDDDILEDIDVDQIVMEHYQSTC 217

Query: 367 TPQPSISKLLPFTPTVIKDNDARPESTCLPLELCVNCSHGLKLGLCSTAANHLQDMKGML 188
           TPQPSISKL P TPT+   N A+ E T LPLELC NCSHG KLGLC  AANHLQ++K ML
Sbjct: 218 TPQPSISKLPPVTPTLSTVNIAKHEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDML 277

Query: 187 ISISNDLLDNVSDLNPDQIEKLCQDRXXXXXXXXXXXXXLCVTSLDEERQNSHFSASTAA 8
           I ISN+LLDNV DL   Q+EKL QDR             L   S+DEER+NS+FSAST  
Sbjct: 278 IVISNELLDNV-DLTSVQVEKLRQDRLYLNKQIQQLEIHLHSVSVDEERKNSNFSASTTT 336

Query: 7   P 5
           P
Sbjct: 337 P 337


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
            [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
            PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
            partial [Cucumis sativus]
          Length = 1269

 Score =  217 bits (552), Expect = 1e-53
 Identities = 133/349 (38%), Positives = 191/349 (54%), Gaps = 14/349 (4%)
 Frame = -1

Query: 1006 KCPKVNWSQRAKAHANFSSQNKFLSTNFLFSLSTQTPCTEGAMAARLITCQVQNFKRVHS 827
            KCPK+NW + +KAH +FS Q KFL +NFLF L  Q P T G+     + CQ+QN +R+  
Sbjct: 77   KCPKMNWLEHSKAHKDFSCQKKFLCSNFLFCLPEQKPSTTGSTDTGNLACQMQNLQRIQR 136

Query: 826  TEVEKVCQALSSIKLSSRNYIKSGRSSPLVKDV------------NKSLEDXXXXXXXXX 683
            ++VEK   ALS+ ++S R+Y K G +   VKDV            + SL D         
Sbjct: 137  SQVEKAWNALSNFQISCRHYAKPGNTRQ-VKDVFSDHPADTGRITSNSLSDANASSHHKK 195

Query: 682  SDVNKSFNTSDLGIGKSKCIGSSFP-SGTFDVVDSGNAASRQSEGXXXXXXXXXXXXXSG 506
              V+++F+   +   K    GS+   S    V++  N     +                G
Sbjct: 196  --VHRNFSEYSVDTTKPSSFGSNLSASSNIQVMEGQNDVDGNNMARLRTINNSHFQRVDG 253

Query: 505  LSSNQTVHASPVDGIQNTFSDGIADDDIVENLDVDQIIMEHY-QWADTPQPSISKLLPFT 329
                  + A+    I ++F +   DD I+EN+DVDQI+ ++  Q A TPQPS+SKL P T
Sbjct: 254  ----SVIFATNQKNICSSFLED-EDDKIIENIDVDQIVEQYQSQSACTPQPSVSKLPPIT 308

Query: 328  PTVIKDNDARPESTCLPLELCVNCSHGLKLGLCSTAANHLQDMKGMLISISNDLLDNVSD 149
            P + KDN AR E +  P ELC NCSHG K+ LC  A++HLQ++K  LISISNDLLDNV++
Sbjct: 309  PIIEKDNVARQEESNYPDELCTNCSHGFKIELCPEASSHLQELKDRLISISNDLLDNVNN 368

Query: 148  LNPDQIEKLCQDRXXXXXXXXXXXXXLCVTSLDEERQNSHFSASTAAPR 2
            L+P QI+KL Q+R             + + +++EER+ SH  A+T  P+
Sbjct: 369  LSPVQIDKLRQERVHLNKQIQLLERHISLDAVNEERRRSHLFATTVTPK 417


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
           vinifera]
          Length = 1224

 Score =  199 bits (506), Expect = 3e-48
 Identities = 125/278 (44%), Positives = 155/278 (55%), Gaps = 12/278 (4%)
 Frame = -1

Query: 802 ALSSIKLSSRNYIKSGRSSPLVKDVNKSL-EDXXXXXXXXXSDVNKSF---NTSDLGIGK 635
           ALSS+KLSSRNY K G+ +PL+KD +     D          + N  +   N     +G+
Sbjct: 51  ALSSLKLSSRNYSKPGKMAPLLKDASVEFPRDVRKCNLQSSHNTNNQYLEHNLPHQNLGE 110

Query: 634 SK--------CIGSSFPSGTFDVVDSGNAASRQSEGXXXXXXXXXXXXXSGLSSNQTVHA 479
           +         C G+SF SG+    ++G     Q+E                 S    VH 
Sbjct: 111 TNSSYSETASCRGNSFRSGSACAENAGREGG-QNETKPSMLYNSHIQVVGQSSGTCNVHT 169

Query: 478 SPVDGIQNTFSDGIADDDIVENLDVDQIIMEHYQWADTPQPSISKLLPFTPTVIKDNDAR 299
             V  +   F +G  DDDI+E++DVDQI+MEHYQ   TPQPSISKL P TPT+   N A+
Sbjct: 170 GQVKELVGAFPNGTDDDDILEDIDVDQIVMEHYQSTCTPQPSISKLPPVTPTLSTVNIAK 229

Query: 298 PESTCLPLELCVNCSHGLKLGLCSTAANHLQDMKGMLISISNDLLDNVSDLNPDQIEKLC 119
            E T LPLELC NCSHG KLGLC  AANHLQ++K MLI ISN+LLDNV DL   Q+EKL 
Sbjct: 230 HEETFLPLELCSNCSHGFKLGLCPEAANHLQELKDMLIVISNELLDNV-DLTSVQVEKLR 288

Query: 118 QDRXXXXXXXXXXXXXLCVTSLDEERQNSHFSASTAAP 5
           QDR             L   S+DEER+NS+FSAST  P
Sbjct: 289 QDRLYLNKQIQQLEIHLHSVSVDEERKNSNFSASTTTP 326


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