BLASTX nr result
ID: Panax21_contig00011121
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00011121 (628 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285016.2| PREDICTED: uncharacterized protein LOC100267... 84 3e-14 ref|XP_002329130.1| predicted protein [Populus trichocarpa] gi|2... 74 3e-11 ref|XP_002533906.1| DNA double-strand break repair rad50 ATPase,... 73 4e-11 ref|XP_002316898.1| predicted protein [Populus trichocarpa] gi|2... 73 4e-11 gb|ADE42483.1| proton pump interactor 1 [Solanum tuberosum] 71 1e-10 >ref|XP_002285016.2| PREDICTED: uncharacterized protein LOC100267528 [Vitis vinifera] Length = 627 Score = 83.6 bits (205), Expect = 3e-14 Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 3/92 (3%) Frame = -3 Query: 539 SSAIPEEPTELAD-EVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILK 363 ++A EEPTE AD EV E E+ + VE VPSKTK++K T+ R K GPDSLP+ ILK Sbjct: 536 ATATNEEPTEAADAEVVEVEKTNVNVEPPVPSKTKEQKENTIRHRNKKRGPDSLPRAILK 595 Query: 362 RKKSTNYWVW--XXXXXXXXXXXXAIGYYYLI 273 RKK+TNYW+W +G++YL+ Sbjct: 596 RKKTTNYWIWAAAAAAVLLVLLLVVVGFHYLL 627 >ref|XP_002329130.1| predicted protein [Populus trichocarpa] gi|222869799|gb|EEF06930.1| predicted protein [Populus trichocarpa] Length = 616 Score = 73.6 bits (179), Expect = 3e-11 Identities = 40/85 (47%), Positives = 47/85 (55%) Frame = -3 Query: 527 PEEPTELADEVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILKRKKST 348 PEEP E E AEPE + E VP K K K TV R + GP SLPK+I +RKKST Sbjct: 532 PEEPVEAVAE-AEPEMDEVNDEVPVPVKEKVGKENTVRPRNRPRGPGSLPKVIPRRKKST 590 Query: 347 NYWVWXXXXXXXXXXXXAIGYYYLI 273 NYW+W A+GYYY + Sbjct: 591 NYWIWAAPAALVVLLFLALGYYYYL 615 >ref|XP_002533906.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus communis] gi|223526139|gb|EEF28480.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus communis] Length = 616 Score = 73.2 bits (178), Expect = 4e-11 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%) Frame = -3 Query: 536 SAIPEEPTELADEVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILKRK 357 S PEEP E E EPE+ + E + P K K RK +V R +A G DSLPK IL+RK Sbjct: 524 STEPEEPAEQVSEAVEPEKLEVQDEPSAPVKDKIRKENSVRHRTRAKGGDSLPKAILRRK 583 Query: 356 KSTNYWVW--XXXXXXXXXXXXAIGYYY 279 +STNYW+W A+GYYY Sbjct: 584 RSTNYWMWAGAAGAALLLLVFLALGYYY 611 >ref|XP_002316898.1| predicted protein [Populus trichocarpa] gi|222859963|gb|EEE97510.1| predicted protein [Populus trichocarpa] Length = 619 Score = 73.2 bits (178), Expect = 4e-11 Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Frame = -3 Query: 521 EPTELADEVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILKRKKSTNY 342 EP +LA+ VAE E E V K K RK KTV R + GPDSLPK+I +RKKSTN+ Sbjct: 536 EPEQLAEAVAEAAEPTVNDEVPVSVKEKVRKEKTVRSRNRPRGPDSLPKVITRRKKSTNF 595 Query: 341 WVW-XXXXXXXXXXXXAIGYYYLI 273 W+W A+GYYYL+ Sbjct: 596 WMWAASAAAFVVLLFLALGYYYLL 619 >gb|ADE42483.1| proton pump interactor 1 [Solanum tuberosum] Length = 629 Score = 71.2 bits (173), Expect = 1e-10 Identities = 39/84 (46%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Frame = -3 Query: 524 EEPTELADEVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILKRKKSTN 345 EEPTE +E+AE E A+ VE AV K K RK T+ R LPK ILKRKK+TN Sbjct: 544 EEPTETPEEIAEEENAEETVETAVAPKVKARKDNTIRHRATRARGSELPKSILKRKKATN 603 Query: 344 YWVW-XXXXXXXXXXXXAIGYYYL 276 YW+W IGY YL Sbjct: 604 YWLWAAAPAALAILVLLVIGYMYL 627