BLASTX nr result

ID: Panax21_contig00011121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011121
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285016.2| PREDICTED: uncharacterized protein LOC100267...    84   3e-14
ref|XP_002329130.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-11
ref|XP_002533906.1| DNA double-strand break repair rad50 ATPase,...    73   4e-11
ref|XP_002316898.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-11
gb|ADE42483.1| proton pump interactor 1 [Solanum tuberosum]            71   1e-10

>ref|XP_002285016.2| PREDICTED: uncharacterized protein LOC100267528 [Vitis vinifera]
          Length = 627

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
 Frame = -3

Query: 539 SSAIPEEPTELAD-EVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILK 363
           ++A  EEPTE AD EV E E+ +  VE  VPSKTK++K  T+  R K  GPDSLP+ ILK
Sbjct: 536 ATATNEEPTEAADAEVVEVEKTNVNVEPPVPSKTKEQKENTIRHRNKKRGPDSLPRAILK 595

Query: 362 RKKSTNYWVW--XXXXXXXXXXXXAIGYYYLI 273
           RKK+TNYW+W               +G++YL+
Sbjct: 596 RKKTTNYWIWAAAAAAVLLVLLLVVVGFHYLL 627


>ref|XP_002329130.1| predicted protein [Populus trichocarpa] gi|222869799|gb|EEF06930.1|
           predicted protein [Populus trichocarpa]
          Length = 616

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 40/85 (47%), Positives = 47/85 (55%)
 Frame = -3

Query: 527 PEEPTELADEVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILKRKKST 348
           PEEP E   E AEPE  +   E  VP K K  K  TV  R +  GP SLPK+I +RKKST
Sbjct: 532 PEEPVEAVAE-AEPEMDEVNDEVPVPVKEKVGKENTVRPRNRPRGPGSLPKVIPRRKKST 590

Query: 347 NYWVWXXXXXXXXXXXXAIGYYYLI 273
           NYW+W            A+GYYY +
Sbjct: 591 NYWIWAAPAALVVLLFLALGYYYYL 615


>ref|XP_002533906.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
           communis] gi|223526139|gb|EEF28480.1| DNA double-strand
           break repair rad50 ATPase, putative [Ricinus communis]
          Length = 616

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = -3

Query: 536 SAIPEEPTELADEVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILKRK 357
           S  PEEP E   E  EPE+ +   E + P K K RK  +V  R +A G DSLPK IL+RK
Sbjct: 524 STEPEEPAEQVSEAVEPEKLEVQDEPSAPVKDKIRKENSVRHRTRAKGGDSLPKAILRRK 583

Query: 356 KSTNYWVW--XXXXXXXXXXXXAIGYYY 279
           +STNYW+W              A+GYYY
Sbjct: 584 RSTNYWMWAGAAGAALLLLVFLALGYYY 611


>ref|XP_002316898.1| predicted protein [Populus trichocarpa] gi|222859963|gb|EEE97510.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = -3

Query: 521 EPTELADEVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILKRKKSTNY 342
           EP +LA+ VAE  E     E  V  K K RK KTV  R +  GPDSLPK+I +RKKSTN+
Sbjct: 536 EPEQLAEAVAEAAEPTVNDEVPVSVKEKVRKEKTVRSRNRPRGPDSLPKVITRRKKSTNF 595

Query: 341 WVW-XXXXXXXXXXXXAIGYYYLI 273
           W+W             A+GYYYL+
Sbjct: 596 WMWAASAAAFVVLLFLALGYYYLL 619


>gb|ADE42483.1| proton pump interactor 1 [Solanum tuberosum]
          Length = 629

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 39/84 (46%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = -3

Query: 524 EEPTELADEVAEPEEADGIVEAAVPSKTKKRKGKTVGQRGKANGPDSLPKIILKRKKSTN 345
           EEPTE  +E+AE E A+  VE AV  K K RK  T+  R        LPK ILKRKK+TN
Sbjct: 544 EEPTETPEEIAEEENAEETVETAVAPKVKARKDNTIRHRATRARGSELPKSILKRKKATN 603

Query: 344 YWVW-XXXXXXXXXXXXAIGYYYL 276
           YW+W              IGY YL
Sbjct: 604 YWLWAAAPAALAILVLLVIGYMYL 627


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