BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011113
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis...   225   3e-57
ref|XP_002892033.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis...   224   4e-57
ref|NP_171702.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis th...   224   7e-57
gb|AAM61323.1| nucleotide sugar epimerase, putative [Arabidopsis...   224   7e-57
ref|NP_191922.1| UDP-D-glucuronate 4-epimerase 3 [Arabidopsis th...   222   2e-56

>ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297318808|gb|EFH49230.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 429

 Score =  225 bits (573), Expect = 3e-57
 Identities = 117/152 (76%), Positives = 132/152 (86%), Gaps = 2/152 (1%)
 Frame = +3

Query: 54  PEQSRRSLQTTTSGTGTDWECRVRVSARSKTGR--IVLVTGAAGFVGTHVSAALKRRGDG 227
           P+ SRRSL+T + G G  WE RVR SAR +T R   VLVTGAAGFVGTHVSAALKRRGDG
Sbjct: 57  PDPSRRSLRTYSWG-GPAWEKRVRSSARVRTRRGFSVLVTGAAGFVGTHVSAALKRRGDG 115

Query: 228 VVGLDNFNRYYDITLKRSRKSLLERAGIFVIEGDINDAVLLKKLFDTVAFTHVMHLAAQA 407
           V+GLDNFN YYD +LKR+R++LLER+G+FV+EGDINDA LLKKLF+ V FTHVMHLAAQA
Sbjct: 116 VLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQA 175

Query: 408 GVRYAMKNPNSYVQSNIAGFVNLLEACKSANP 503
           GVRYAM+NP+SYV SNIAGFVNLLE CKSANP
Sbjct: 176 GVRYAMENPSSYVHSNIAGFVNLLEVCKSANP 207


>ref|XP_002892033.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297337875|gb|EFH68292.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score =  224 bits (572), Expect = 4e-57
 Identities = 116/152 (76%), Positives = 131/152 (86%), Gaps = 2/152 (1%)
 Frame = +3

Query: 54  PEQSRRSLQTTTSGTGTDWECRVRVSARSKT--GRIVLVTGAAGFVGTHVSAALKRRGDG 227
           P+ SRRSL+T + G G  WE RVR SAR +T  G  VLVTGAAGFVGTHVSAALKRRGDG
Sbjct: 59  PDSSRRSLRTYSWG-GPHWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDG 117

Query: 228 VVGLDNFNRYYDITLKRSRKSLLERAGIFVIEGDINDAVLLKKLFDTVAFTHVMHLAAQA 407
           V+GLDNFN YYD +LKRSR++LLER+G+F++EGDIND  LLKKLF+ V FTHVMHLAAQA
Sbjct: 118 VLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQA 177

Query: 408 GVRYAMKNPNSYVQSNIAGFVNLLEACKSANP 503
           GVRYAM+NP+SYV SNIAGFVNLLE CKSANP
Sbjct: 178 GVRYAMENPSSYVHSNIAGFVNLLEVCKSANP 209


>ref|NP_171702.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis thaliana]
           gi|75264107|sp|Q9LPC1.1|GAE2_ARATH RecName:
           Full=UDP-glucuronate 4-epimerase 2; AltName:
           Full=UDP-glucuronic acid epimerase 2
           gi|8570451|gb|AAF76478.1|AC020622_12 Contains similarity
           to CAPI protein from Staphylococcus aureus gi|P39858 and
           contains a NAD dependent epimerase/dehydratase PF|01370
           domain. ESTs gb|N97076, gb|AI997010 come from this gene
           [Arabidopsis thaliana]
           gi|12248041|gb|AAG50112.1|AF334734_1 putative nucleotide
           sugar epimerase [Arabidopsis thaliana]
           gi|332189243|gb|AEE27364.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis thaliana]
          Length = 434

 Score =  224 bits (570), Expect = 7e-57
 Identities = 116/152 (76%), Positives = 130/152 (85%), Gaps = 2/152 (1%)
 Frame = +3

Query: 54  PEQSRRSLQTTTSGTGTDWECRVRVSARSKT--GRIVLVTGAAGFVGTHVSAALKRRGDG 227
           P+ SRRSL+T + G G  WE RVR SAR +T  G  VLVTGAAGFVGTHVSAALKRRGDG
Sbjct: 59  PDSSRRSLRTYSWG-GPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDG 117

Query: 228 VVGLDNFNRYYDITLKRSRKSLLERAGIFVIEGDINDAVLLKKLFDTVAFTHVMHLAAQA 407
           V+GLDNFN YYD +LKRSR++LLER+G+F++EGDIND  LLKKLF+ V FTHVMHLAAQA
Sbjct: 118 VLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQA 177

Query: 408 GVRYAMKNPNSYVQSNIAGFVNLLEACKSANP 503
           GVRYAM+NP SYV SNIAGFVNLLE CKSANP
Sbjct: 178 GVRYAMENPGSYVHSNIAGFVNLLEVCKSANP 209


>gb|AAM61323.1| nucleotide sugar epimerase, putative [Arabidopsis thaliana]
          Length = 419

 Score =  224 bits (570), Expect = 7e-57
 Identities = 116/152 (76%), Positives = 130/152 (85%), Gaps = 2/152 (1%)
 Frame = +3

Query: 54  PEQSRRSLQTTTSGTGTDWECRVRVSARSKT--GRIVLVTGAAGFVGTHVSAALKRRGDG 227
           P+ SRRSL+T + G G  WE RVR SAR +T  G  VLVTGAAGFVGTHVSAALKRRGDG
Sbjct: 44  PDSSRRSLRTYSWG-GPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDG 102

Query: 228 VVGLDNFNRYYDITLKRSRKSLLERAGIFVIEGDINDAVLLKKLFDTVAFTHVMHLAAQA 407
           V+GLDNFN YYD +LKRSR++LLER+G+F++EGDIND  LLKKLF+ V FTHVMHLAAQA
Sbjct: 103 VLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQA 162

Query: 408 GVRYAMKNPNSYVQSNIAGFVNLLEACKSANP 503
           GVRYAM+NP SYV SNIAGFVNLLE CKSANP
Sbjct: 163 GVRYAMENPGSYVHSNIAGFVNLLEVCKSANP 194


>ref|NP_191922.1| UDP-D-glucuronate 4-epimerase 3 [Arabidopsis thaliana]
           gi|75100157|sp|O81312.1|GAE3_ARATH RecName:
           Full=UDP-glucuronate 4-epimerase 3; AltName:
           Full=UDP-glucuronic acid epimerase 3
           gi|3193316|gb|AAC19298.1| contains similarity to
           nucleotide sugar epimerases [Arabidopsis thaliana]
           gi|7267098|emb|CAB80769.1| putative nucleotide sugar
           epimerase [Arabidopsis thaliana]
           gi|111074442|gb|ABH04594.1| At4g00110 [Arabidopsis
           thaliana] gi|332656424|gb|AEE81824.1| UDP-D-glucuronate
           4-epimerase 3 [Arabidopsis thaliana]
          Length = 430

 Score =  222 bits (566), Expect = 2e-56
 Identities = 116/151 (76%), Positives = 131/151 (86%), Gaps = 2/151 (1%)
 Frame = +3

Query: 57  EQSRRSLQTTTSGTGTDWECRVRVSARSKTGR--IVLVTGAAGFVGTHVSAALKRRGDGV 230
           + SRRSL+T + G G  WE RVR SAR +T R   VLVTGAAGFVGTHVSAALKRRGDGV
Sbjct: 59  DPSRRSLRTYSWG-GPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGV 117

Query: 231 VGLDNFNRYYDITLKRSRKSLLERAGIFVIEGDINDAVLLKKLFDTVAFTHVMHLAAQAG 410
           +GLDNFN YYD +LKR+R++LLER+G+FV+EGDINDA LLKKLF+ V FTHVMHLAAQAG
Sbjct: 118 LGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAG 177

Query: 411 VRYAMKNPNSYVQSNIAGFVNLLEACKSANP 503
           VRYAM+NP+SYV SNIAGFVNLLE CKSANP
Sbjct: 178 VRYAMENPSSYVHSNIAGFVNLLEVCKSANP 208