BLASTX nr result

ID: Panax21_contig00011107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011107
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279724.1| PREDICTED: importin subunit alpha-2 [Vitis v...   270   2e-70
ref|XP_002323457.1| predicted protein [Populus trichocarpa] gi|2...   259   4e-67
emb|CAN61727.1| hypothetical protein VITISV_032422 [Vitis vinifera]   258   1e-66
ref|XP_002525173.1| Importin alpha-2 subunit, putative [Ricinus ...   251   9e-65
ref|NP_195927.2| importin alpha isoform 9 [Arabidopsis thaliana]...   248   1e-63

>ref|XP_002279724.1| PREDICTED: importin subunit alpha-2 [Vitis vinifera]
           gi|297741569|emb|CBI32701.3| unnamed protein product
           [Vitis vinifera]
          Length = 517

 Score =  270 bits (691), Expect = 2e-70
 Identities = 140/183 (76%), Positives = 154/183 (84%), Gaps = 1/183 (0%)
 Frame = -2

Query: 546 MADESLASHRRDPIKSSVGNVAAQRRKQHAVTVGKERREALVRTKRLCRVGVS-DIDDPV 370
           MAD+ LASHRRDPIKSSVGNVAA RR+Q A+TVGKERREALVRTKRLCRVG+S D D PV
Sbjct: 1   MADDGLASHRRDPIKSSVGNVAANRRRQQAITVGKERREALVRTKRLCRVGISGDSDVPV 60

Query: 369 ESDMMIDEEQSILEAQTTAAVEELNLALAYQGKGALHKKVDAXXXXXXXXXXXEFPPVEA 190
           + DMMIDEEQSILE QT++AVEEL   + YQGKGA+ K+V A           EFPP+EA
Sbjct: 61  DGDMMIDEEQSILETQTSSAVEELKSTVIYQGKGAMQKRVSALRDLRRLLSRSEFPPIEA 120

Query: 189 AIKAGAVGLLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALWPVLPLLVAHLGEKSS 10
           A+KAGAV +LVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKAL P LPLL+AHLGEKSS
Sbjct: 121 ALKAGAVSVLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALVPALPLLIAHLGEKSS 180

Query: 9   LPV 1
            PV
Sbjct: 181 PPV 183


>ref|XP_002323457.1| predicted protein [Populus trichocarpa] gi|222868087|gb|EEF05218.1|
           predicted protein [Populus trichocarpa]
          Length = 522

 Score =  259 bits (662), Expect = 4e-67
 Identities = 137/184 (74%), Positives = 153/184 (83%), Gaps = 2/184 (1%)
 Frame = -2

Query: 546 MADESLASHRRDPIKSSVGNVAAQRRKQHAVTVGKERREALVRTKRLCRVGVS--DIDDP 373
           MA++ L  HRRDPIKSSVGNVAA RR+Q+AV VGKERRE+LVR KRLCRVG S  D D  
Sbjct: 1   MAEDGLNPHRRDPIKSSVGNVAAHRRRQNAVAVGKERRESLVRAKRLCRVGPSCDDSDIS 60

Query: 372 VESDMMIDEEQSILEAQTTAAVEELNLALAYQGKGALHKKVDAXXXXXXXXXXXEFPPVE 193
           +E+DM+IDEEQSILEAQT++AVEEL  A+++QGKGA+ K V A           EFPPVE
Sbjct: 61  IENDMIIDEEQSILEAQTSSAVEELKSAVSFQGKGAMQKLVGALREMRRLLSKSEFPPVE 120

Query: 192 AAIKAGAVGLLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALWPVLPLLVAHLGEKS 13
           AAIKAGA+ LLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKAL P LPLL+AHLGEKS
Sbjct: 121 AAIKAGAIPLLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALLPALPLLIAHLGEKS 180

Query: 12  SLPV 1
           SLPV
Sbjct: 181 SLPV 184


>emb|CAN61727.1| hypothetical protein VITISV_032422 [Vitis vinifera]
          Length = 530

 Score =  258 bits (659), Expect = 1e-66
 Identities = 139/200 (69%), Positives = 153/200 (76%), Gaps = 18/200 (9%)
 Frame = -2

Query: 546 MADESLASHRRDPIKSS-----------------VGNVAAQRRKQHAVTVGKERREALVR 418
           MAD+ LASHRRDPIKSS                  GNVAA RR+Q A+TVGKERREALVR
Sbjct: 1   MADDGLASHRRDPIKSSGIFTFILTIVSLSLPSPFGNVAANRRRQQAITVGKERREALVR 60

Query: 417 TKRLCRVGVS-DIDDPVESDMMIDEEQSILEAQTTAAVEELNLALAYQGKGALHKKVDAX 241
           TKRLCRVG+S D D PV+ DMMIDEEQSILE QT++AVEEL   + YQGKGA+ K+V A 
Sbjct: 61  TKRLCRVGISGDSDVPVDGDMMIDEEQSILETQTSSAVEELKSTVIYQGKGAMQKRVSAL 120

Query: 240 XXXXXXXXXXEFPPVEAAIKAGAVGLLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKA 61
                     EFPP+EAA+KAGAV +LVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKA
Sbjct: 121 RDLRRLLSRSEFPPIEAALKAGAVSVLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKA 180

Query: 60  LWPVLPLLVAHLGEKSSLPV 1
           L P LPLL+AHLGEKSS PV
Sbjct: 181 LLPALPLLIAHLGEKSSPPV 200


>ref|XP_002525173.1| Importin alpha-2 subunit, putative [Ricinus communis]
           gi|223535470|gb|EEF37139.1| Importin alpha-2 subunit,
           putative [Ricinus communis]
          Length = 517

 Score =  251 bits (642), Expect = 9e-65
 Identities = 133/182 (73%), Positives = 151/182 (82%)
 Frame = -2

Query: 546 MADESLASHRRDPIKSSVGNVAAQRRKQHAVTVGKERREALVRTKRLCRVGVSDIDDPVE 367
           MA+E L S +R+PIKSSVGNVAAQ+RKQ+AV VGKERRE+LVR KRLCRVG S   D   
Sbjct: 1   MAEEGLTSLKREPIKSSVGNVAAQKRKQNAVAVGKERRESLVRAKRLCRVGTSGDSD--- 57

Query: 366 SDMMIDEEQSILEAQTTAAVEELNLALAYQGKGALHKKVDAXXXXXXXXXXXEFPPVEAA 187
           S+M+IDEEQSIL+AQT++AVEEL  A+A+QGKGA+ KKV A           EFPP+EAA
Sbjct: 58  SEMIIDEEQSILDAQTSSAVEELKSAVAFQGKGAMQKKVGALRELRRLLSRSEFPPIEAA 117

Query: 186 IKAGAVGLLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALWPVLPLLVAHLGEKSSL 7
           IKAGA+ LLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKAL P LPLL+AHLGE+SS 
Sbjct: 118 IKAGAIILLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALLPALPLLIAHLGERSSS 177

Query: 6   PV 1
           PV
Sbjct: 178 PV 179


>ref|NP_195927.2| importin alpha isoform 9 [Arabidopsis thaliana]
           gi|332003170|gb|AED90553.1| importin alpha isoform 9
           [Arabidopsis thaliana]
          Length = 519

 Score =  248 bits (633), Expect = 1e-63
 Identities = 130/184 (70%), Positives = 150/184 (81%), Gaps = 2/184 (1%)
 Frame = -2

Query: 546 MADESLASHRRDPIKSSVGNVAAQRRKQHAVTVGKERREALVRTKRLCRVGVS-DIDDP- 373
           MAD+  AS+RRDPIKSSVGNVA QRR++ AVTV KERRE LVR KRLCRVG + D++D  
Sbjct: 1   MADDGSASNRRDPIKSSVGNVAGQRRRKQAVTVAKERRELLVRAKRLCRVGTNGDVEDAL 60

Query: 372 VESDMMIDEEQSILEAQTTAAVEELNLALAYQGKGALHKKVDAXXXXXXXXXXXEFPPVE 193
           VE++MM+DEEQ ILEAQ + +VEEL  A+ YQGKGA+ K+V A           EFPPVE
Sbjct: 61  VENEMMVDEEQPILEAQASKSVEELKSAVQYQGKGAMQKRVTALRELRRLLSKSEFPPVE 120

Query: 192 AAIKAGAVGLLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALWPVLPLLVAHLGEKS 13
           AA++AGA+ LLVQCLSFGSPDEQLLE+AWCLTNIAAGKPEETKAL P LPLL+AHLGEKS
Sbjct: 121 AALRAGAIPLLVQCLSFGSPDEQLLESAWCLTNIAAGKPEETKALLPALPLLIAHLGEKS 180

Query: 12  SLPV 1
           S PV
Sbjct: 181 SAPV 184


Top