BLASTX nr result

ID: Panax21_contig00011095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011095
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...    64   4e-08
emb|CBI26227.3| unnamed protein product [Vitis vinifera]               64   4e-08
ref|XP_004171423.1| PREDICTED: LOW QUALITY PROTEIN: protein TIME...    62   1e-07
ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cuc...    62   1e-07
ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06

>ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1587

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGIKKDRER 423
           MDRNREARRA+ G +   NGL            SPEEDG VEL E  RLRDRG KKDR+R
Sbjct: 1   MDRNREARRASMGTS---NGLSRRRHRSSSLRDSPEEDGAVELPETARLRDRGSKKDRDR 57

Query: 422 DR 417
           +R
Sbjct: 58  ER 59


>emb|CBI26227.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGIKKDRER 423
           MDRNREARRA+ G +   NGL            SPEEDG VEL E  RLRDRG KKDR+R
Sbjct: 1   MDRNREARRASMGTS---NGLSRRRHRSSSLRDSPEEDGAVELPETARLRDRGSKKDRDR 57

Query: 422 DR 417
           +R
Sbjct: 58  ER 59


>ref|XP_004171423.1| PREDICTED: LOW QUALITY PROTEIN: protein TIME FOR COFFEE-like,
           partial [Cucumis sativus]
          Length = 624

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = -2

Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGI-KKDRE 426
           MDRNREARR T  M AS NGL            SPE+DG +ELQ+  RLRDRG  KKDR+
Sbjct: 1   MDRNREARRTTTNMVAS-NGLSRRRYRSGGLRDSPEDDGPLELQDTVRLRDRGSGKKDRD 59

Query: 425 RDR 417
           RDR
Sbjct: 60  RDR 62


>ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cucumis sativus]
          Length = 1560

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = -2

Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGI-KKDRE 426
           MDRNREARR T  M AS NGL            SPE+DG +ELQ+  RLRDRG  KKDR+
Sbjct: 1   MDRNREARRTTTNMVAS-NGLSRRRYRSGGLRDSPEDDGPLELQDTVRLRDRGSGKKDRD 59

Query: 425 RDR 417
           RDR
Sbjct: 60  RDR 62


>ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|222864822|gb|EEF01953.1|
           predicted protein [Populus trichocarpa]
          Length = 1202

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 36/62 (58%), Positives = 40/62 (64%)
 Frame = -2

Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGIKKDRER 423
           MDRNREARR   GMAAS NGL            SPE+DG VELQE  +LRDR   +DR+R
Sbjct: 1   MDRNREARRV--GMAAS-NGLSRRRHRSSSLRDSPEDDGPVELQETTKLRDRRKDRDRDR 57

Query: 422 DR 417
           DR
Sbjct: 58  DR 59


Top