BLASTX nr result
ID: Panax21_contig00011095
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00011095 (729 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit... 64 4e-08 emb|CBI26227.3| unnamed protein product [Vitis vinifera] 64 4e-08 ref|XP_004171423.1| PREDICTED: LOW QUALITY PROTEIN: protein TIME... 62 1e-07 ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cuc... 62 1e-07 ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|2... 58 2e-06 >ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera] Length = 1587 Score = 63.5 bits (153), Expect = 4e-08 Identities = 36/62 (58%), Positives = 40/62 (64%) Frame = -2 Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGIKKDRER 423 MDRNREARRA+ G + NGL SPEEDG VEL E RLRDRG KKDR+R Sbjct: 1 MDRNREARRASMGTS---NGLSRRRHRSSSLRDSPEEDGAVELPETARLRDRGSKKDRDR 57 Query: 422 DR 417 +R Sbjct: 58 ER 59 >emb|CBI26227.3| unnamed protein product [Vitis vinifera] Length = 966 Score = 63.5 bits (153), Expect = 4e-08 Identities = 36/62 (58%), Positives = 40/62 (64%) Frame = -2 Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGIKKDRER 423 MDRNREARRA+ G + NGL SPEEDG VEL E RLRDRG KKDR+R Sbjct: 1 MDRNREARRASMGTS---NGLSRRRHRSSSLRDSPEEDGAVELPETARLRDRGSKKDRDR 57 Query: 422 DR 417 +R Sbjct: 58 ER 59 >ref|XP_004171423.1| PREDICTED: LOW QUALITY PROTEIN: protein TIME FOR COFFEE-like, partial [Cucumis sativus] Length = 624 Score = 62.0 bits (149), Expect = 1e-07 Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Frame = -2 Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGI-KKDRE 426 MDRNREARR T M AS NGL SPE+DG +ELQ+ RLRDRG KKDR+ Sbjct: 1 MDRNREARRTTTNMVAS-NGLSRRRYRSGGLRDSPEDDGPLELQDTVRLRDRGSGKKDRD 59 Query: 425 RDR 417 RDR Sbjct: 60 RDR 62 >ref|XP_004140148.1| PREDICTED: protein TIME FOR COFFEE-like [Cucumis sativus] Length = 1560 Score = 62.0 bits (149), Expect = 1e-07 Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Frame = -2 Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGI-KKDRE 426 MDRNREARR T M AS NGL SPE+DG +ELQ+ RLRDRG KKDR+ Sbjct: 1 MDRNREARRTTTNMVAS-NGLSRRRYRSGGLRDSPEDDGPLELQDTVRLRDRGSGKKDRD 59 Query: 425 RDR 417 RDR Sbjct: 60 RDR 62 >ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|222864822|gb|EEF01953.1| predicted protein [Populus trichocarpa] Length = 1202 Score = 58.2 bits (139), Expect = 2e-06 Identities = 36/62 (58%), Positives = 40/62 (64%) Frame = -2 Query: 602 MDRNREARRATAGMAASPNGLXXXXXXXXXXXXSPEEDGQVELQEPGRLRDRGIKKDRER 423 MDRNREARR GMAAS NGL SPE+DG VELQE +LRDR +DR+R Sbjct: 1 MDRNREARRV--GMAAS-NGLSRRRHRSSSLRDSPEDDGPVELQETTKLRDRRKDRDRDR 57 Query: 422 DR 417 DR Sbjct: 58 DR 59