BLASTX nr result

ID: Panax21_contig00011092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011092
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [V...    60   4e-11
emb|CBI26081.3| unnamed protein product [Vitis vinifera]               60   5e-11
ref|XP_002532961.1| actin binding protein, putative [Ricinus com...    71   1e-10
ref|NP_001190497.1| isoleucyl-tRNA synthetase [Arabidopsis thali...    57   2e-10
ref|XP_002865697.1| hypothetical protein ARALYDRAFT_494966 [Arab...    57   2e-10

>ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1105

 Score = 59.7 bits (143), Expect(2) = 4e-11
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -3

Query: 391 QMSSFKRYGVWGDWDHSYLTLDPEYEAAQ 305
           QM+SFKRYGVWGDW++ YLTLDPEYEA+Q
Sbjct: 249 QMASFKRYGVWGDWNNPYLTLDPEYEASQ 277



 Score = 33.5 bits (75), Expect(2) = 4e-11
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = -2

Query: 485 MLQSLDQEARKALTPLKLR 429
           +LQSLDQ+AR+ LTPLKLR
Sbjct: 217 VLQSLDQDARRELTPLKLR 235


>emb|CBI26081.3| unnamed protein product [Vitis vinifera]
          Length = 1221

 Score = 59.7 bits (143), Expect(2) = 5e-11
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -3

Query: 391 QMSSFKRYGVWGDWDHSYLTLDPEYEAAQ 305
           QM+SFKRYGVWGDW++ YLTLDPEYEA+Q
Sbjct: 365 QMASFKRYGVWGDWNNPYLTLDPEYEASQ 393



 Score = 33.1 bits (74), Expect(2) = 5e-11
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -2

Query: 482 LQSLDQEARKALTPLKLR 429
           LQSLDQ+AR+ LTPLKLR
Sbjct: 334 LQSLDQDARRELTPLKLR 351


>ref|XP_002532961.1| actin binding protein, putative [Ricinus communis]
            gi|223527271|gb|EEF29427.1| actin binding protein,
            putative [Ricinus communis]
          Length = 1170

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -1

Query: 618  VSDLWNSLDVVNSTAEQIRSSVKLKKVMQTILSLRNALNQGTARDVAV 475
            VSDL  SL+VVNSTAE+IR+S KLKKVMQTILSL NALNQGTAR  A+
Sbjct: 929  VSDLRKSLNVVNSTAEEIRNSAKLKKVMQTILSLGNALNQGTARGSAI 976


>ref|NP_001190497.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
           gi|332008381|gb|AED95764.1| isoleucyl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 1279

 Score = 56.6 bits (135), Expect(2) = 2e-10
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -3

Query: 391 QMSSFKRYGVWGDWDHSYLTLDPEYEAAQ 305
           QM SFKR+GVW DW++ YLTLDPEYEAAQ
Sbjct: 421 QMESFKRFGVWADWNNPYLTLDPEYEAAQ 449



 Score = 34.3 bits (77), Expect(2) = 2e-10
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 485 MLQSLDQEARKALTPLKLR 429
           +LQSLDQE RK LTPLKLR
Sbjct: 389 VLQSLDQEVRKELTPLKLR 407


>ref|XP_002865697.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
           lyrata] gi|297311532|gb|EFH41956.1| hypothetical protein
           ARALYDRAFT_494966 [Arabidopsis lyrata subsp. lyrata]
          Length = 1095

 Score = 56.6 bits (135), Expect(2) = 2e-10
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -3

Query: 391 QMSSFKRYGVWGDWDHSYLTLDPEYEAAQ 305
           QM SFKR+GVW DW++ YLTLDPEYEAAQ
Sbjct: 235 QMESFKRFGVWADWNNPYLTLDPEYEAAQ 263



 Score = 34.3 bits (77), Expect(2) = 2e-10
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 485 MLQSLDQEARKALTPLKLR 429
           +LQSLDQE RK LTPLKLR
Sbjct: 203 VLQSLDQEVRKELTPLKLR 221


Top