BLASTX nr result

ID: Panax21_contig00011080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011080
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23309.3| unnamed protein product [Vitis vinifera]              452   e-124
ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleop...   441   e-121
emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]   437   e-120
ref|XP_003547133.1| PREDICTED: heterogeneous nuclear ribonucleop...   397   e-108
ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleop...   393   e-107

>emb|CBI23309.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  452 bits (1162), Expect = e-124
 Identities = 262/466 (56%), Positives = 309/466 (66%), Gaps = 63/466 (13%)
 Frame = +2

Query: 5    GLGVLDSSIRELQWESAVFPHVLLKNLVVQLQFSTDDGLIPEEGYKPWASALEEGKALMG 184
            GLGV+DS +R+L WESA+FPHVLLKN++VQ+QFST++GL+PEEGYKPWASAL +G A+MG
Sbjct: 189  GLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGNAIMG 248

Query: 185  PGFGKLQDCEVIMLVGLPASGKSTWAEKWVKEHPEKRYVLLGTNLALDQMKVPGLLRKHN 364
            P F   +DCEV+M+VGLPASGKSTWAEKWVKEH EKRYVLLGTNLALDQMKVPGLLRK N
Sbjct: 249  PSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLLRKQN 308

Query: 365  YGERFDLLMNRATSIFNTLLSRASKIPRNYILDQTNVYKNARKRKLKPFANYKKIAVVVF 544
            YGERF+ LM+RAT IFNTLLSRASK P NYI+DQTNVYKNARKRKLKPFAN++KIAVV+F
Sbjct: 309  YGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIAVVLF 368

Query: 545  PKPDELKVRAEKRFKEMGKEVPAEAVNEMLANYVLPMSNDMPGTDEFFDQVIFPENGRME 724
            PKP+ELK RAEKRFKEMGKEVPA+AVNEM+ANYVLP S DMPG+DE FDQV+FPE  R E
Sbjct: 369  PKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPRSKDMPGSDEDFDQVLFPELNRGE 428

Query: 725  SQRLLNEMKTSLAT------KSDLSPCPQKSSVQSYNNTSMQNSRESSIQ-----SYSNP 871
            +Q+ L EMK +L T      KS+ SP  Q+SS+QSYN++S+QN    S+      SY  P
Sbjct: 429  AQKCLEEMKRALGTASHLNLKSNFSPYSQESSLQSYNSSSLQNQGAPSVPDERSLSYHPP 488

Query: 872  SLQ---YQGSLSVDS-EQWXXXXXXXXXXXXXXGNYSRPSGFLP---------------- 991
              Q   YQ    ++S  Q                +   P  F+P                
Sbjct: 489  LPQNYYYQRPAHMNSGHQGVALHGRVEPFPRAYQDNQNP--FMPRDAPYETSLGYSRNFL 546

Query: 992  ----IRSYG--GYDH-----PGSGIESRTSTPGGFVDPYGTYRM---GDIYRDATDPYHC 1129
                  SYG  GYD+     PG G+ S  S   G VDPY    +     I   ATDPY  
Sbjct: 547  SRNDSNSYGTYGYDNSRGSIPGVGMASYQSF--GMVDPYRRTNLESRNPIPMGATDPYVS 604

Query: 1130 SVVEPY-----------------TRTSSFPYNT-GRHMSIPGSLQA 1213
             +VE +                  RTS F +NT G H S+PG   A
Sbjct: 605  GMVESHDKYNVEGVNHYETQAESMRTSLFSHNTLGGHGSVPGGFGA 650


>ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
            1-like [Vitis vinifera]
          Length = 514

 Score =  441 bits (1133), Expect = e-121
 Identities = 215/289 (74%), Positives = 251/289 (86%), Gaps = 6/289 (2%)
 Frame = +2

Query: 5    GLGVLDSSIRELQWESAVFPHVLLKNLVVQLQFSTDDGLIPEEGYKPWASALEEGKALMG 184
            GLGV+DS +R+L WESA+FPHVLLKN++VQ+QFST++GL+PEEGYKPWASAL +G A+MG
Sbjct: 189  GLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGNAIMG 248

Query: 185  PGFGKLQDCEVIMLVGLPASGKSTWAEKWVKEHPEKRYVLLGTNLALDQMKVPGLLRKHN 364
            P F   +DCEV+M+VGLPASGKSTWAEKWVKEH EKRYVLLGTNLALDQMKVPGLLRK N
Sbjct: 249  PSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLLRKQN 308

Query: 365  YGERFDLLMNRATSIFNTLLSRASKIPRNYILDQTNVYKNARKRKLKPFANYKKIAVVVF 544
            YGERF+ LM+RAT IFNTLLSRASK P NYI+DQTNVYKNARKRKLKPFAN++KIAVV+F
Sbjct: 309  YGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIAVVLF 368

Query: 545  PKPDELKVRAEKRFKEMGKEVPAEAVNEMLANYVLPMSNDMPGTDEFFDQVIFPENGRME 724
            PKP+ELK RAEKRFKEMGKEVPA+AVNEM+ANYVLP S DMPG+DE FDQV+FPE  R E
Sbjct: 369  PKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPRSKDMPGSDEDFDQVLFPELNRGE 428

Query: 725  SQRLLNEMKTSLAT------KSDLSPCPQKSSVQSYNNTSMQNSRESSI 853
            +Q+ L EMK +L T      KS+ SP  Q+SS+QSYN++S+QN    S+
Sbjct: 429  AQKCLEEMKRALGTASHLNLKSNFSPYSQESSLQSYNSSSLQNQGAPSV 477


>emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]
          Length = 1021

 Score =  437 bits (1123), Expect = e-120
 Identities = 219/303 (72%), Positives = 256/303 (84%)
 Frame = +2

Query: 5    GLGVLDSSIRELQWESAVFPHVLLKNLVVQLQFSTDDGLIPEEGYKPWASALEEGKALMG 184
            GLGV+DS +R+L WESA+FPHVLLKN++VQ+QFST++GL+PEEGYKPWASAL +G A+MG
Sbjct: 356  GLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGNAIMG 415

Query: 185  PGFGKLQDCEVIMLVGLPASGKSTWAEKWVKEHPEKRYVLLGTNLALDQMKVPGLLRKHN 364
            P F   +DCEV+M+VGLPASGKSTWAEKWVKEH EKRYVLLGTNLALDQMKVPGLLRK N
Sbjct: 416  PSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLLRKQN 475

Query: 365  YGERFDLLMNRATSIFNTLLSRASKIPRNYILDQTNVYKNARKRKLKPFANYKKIAVVVF 544
            YGERF+ LM+RAT IFNTLLSRASK P NYI+DQTNVYKNARKRKLKPFAN++KIAVV+F
Sbjct: 476  YGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIAVVLF 535

Query: 545  PKPDELKVRAEKRFKEMGKEVPAEAVNEMLANYVLPMSNDMPGTDEFFDQVIFPENGRME 724
            PKP+ELK RAEKRFKEMGKEVPA+AVNEM+ANYVLP S DMPG+DE FDQV+FPE  R  
Sbjct: 536  PKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPGSDEDFDQVLFPELNRGX 595

Query: 725  SQRLLNEMKTSLATKSDLSPCPQKSSVQSYNNTSMQNSRESSIQSYSNPSLQYQGSLSVD 904
            +Q+ L EMK +L T S L+    KS+   Y       S+ESS+QSY++ SLQ QG+ SV 
Sbjct: 596  AQKCLEEMKRALGTASHLN---LKSNFSXY-------SQESSLQSYNSSSLQNQGAPSVP 645

Query: 905  SEQ 913
             E+
Sbjct: 646  DER 648


>ref|XP_003547133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
            1-like [Glycine max]
          Length = 517

 Score =  397 bits (1020), Expect = e-108
 Identities = 192/271 (70%), Positives = 233/271 (85%), Gaps = 2/271 (0%)
 Frame = +2

Query: 8    LGVLDSSIRELQWESAVFPHVLLKNLVVQLQFSTDDGLIPEEGYKPWASALEEGKALMGP 187
            LGV+DS    LQW SA+FPHVLLKN+VVQ+QFS  DGL+PE+G+KPWASA+E+G  +MGP
Sbjct: 193  LGVVDSPPGNLQWTSALFPHVLLKNVVVQMQFSVKDGLVPEDGFKPWASAMEDGNIVMGP 252

Query: 188  GFGKLQDCEVIMLVGLPASGKSTWAEKWVKEHPEKRYVLLGTNLALDQMKVPGLLRKHNY 367
             F + +DCEVIM+VGLPASGK+TWAEKWVK+HPEKRYVLLGTN  LDQMKVPGLLR++NY
Sbjct: 253  SFSEPRDCEVIMMVGLPASGKTTWAEKWVKDHPEKRYVLLGTNSILDQMKVPGLLRRNNY 312

Query: 368  GERFDLLMNRATSIFNTLLSRASKIPRNYILDQTNVYKNARKRKLKPFANYKKIAVVVFP 547
            GERFDLLM+RAT IFN LLSRA+ IPRNYI+DQTNVYK+ARKRKL+PFA+Y+KIAVVVFP
Sbjct: 313  GERFDLLMDRATRIFNILLSRAANIPRNYIIDQTNVYKSARKRKLEPFADYQKIAVVVFP 372

Query: 548  KPDELKVRAEKRFKEMGKEVPAEAVNEMLANYVLPMSNDMPGTDEFFDQVIFPENGRMES 727
            KPDELK+R++KRF EMGKEVP +AVN+M+ANYVLP S DMP +DEFFDQV+F E  R ES
Sbjct: 373  KPDELKIRSDKRFTEMGKEVPPDAVNKMIANYVLPKSKDMPRSDEFFDQVMFVELNRGES 432

Query: 728  QRLLNEMKTSLA--TKSDLSPCPQKSSVQSY 814
            Q+ L++MK +LA  + ++ S  P   S +S+
Sbjct: 433  QKYLDQMKQNLAYISSNNSSTLPPGGSFESF 463


>ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
            1-like [Vitis vinifera]
          Length = 590

 Score =  393 bits (1009), Expect = e-107
 Identities = 187/231 (80%), Positives = 213/231 (92%)
 Frame = +2

Query: 5    GLGVLDSSIRELQWESAVFPHVLLKNLVVQLQFSTDDGLIPEEGYKPWASALEEGKALMG 184
            GLGV+DS +R+L WESA+FPHVLLKN++VQ+QFST++GL+PEEGYKPWASAL +G A+MG
Sbjct: 336  GLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGNAIMG 395

Query: 185  PGFGKLQDCEVIMLVGLPASGKSTWAEKWVKEHPEKRYVLLGTNLALDQMKVPGLLRKHN 364
            P F   +DCEV+M+VGLPASGKSTWAEKWVKEH EKRYVLLGTNLALDQMKVPGLLRK N
Sbjct: 396  PSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLLRKQN 455

Query: 365  YGERFDLLMNRATSIFNTLLSRASKIPRNYILDQTNVYKNARKRKLKPFANYKKIAVVVF 544
            YGERF+ LM+RAT IFNTLLSRASK P NYI+DQTNVYKNARKRKLKPFAN++KIAVV+F
Sbjct: 456  YGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIAVVLF 515

Query: 545  PKPDELKVRAEKRFKEMGKEVPAEAVNEMLANYVLPMSNDMPGTDEFFDQV 697
            PKP+ELK RAEKRFKEMGKEVPA+AVNEM+ANYVLP S DMPG+DE FDQ+
Sbjct: 516  PKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPGSDEDFDQL 566


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