BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00011053
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   208   4e-52
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             204   6e-51
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...   202   3e-50
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             200   9e-50
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   199   2e-49

>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  208 bits (529), Expect = 4e-52
 Identities = 97/162 (59%), Positives = 130/162 (80%)
 Frame = -3

Query: 486  LSFMDAFSGYHQISMCKEDIPKTTFITHRSVYAYKKMIFGLINAGATYQRMMNFIFDRQL 307
            LSFMDAFSGY+QI M  ED  KT FIT R +Y YK M FGL NAGATY R++N +F   +
Sbjct: 551  LSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPFGLRNAGATYPRLVNKMFSEHV 610

Query: 306  GRNMEVYVDDMIVKSMQVQKHLDDLEECFQTVRHHKLRLNPAKCTFGLGAGKFLGYLVSQ 127
            G+ MEVY+DDM++KS++ + H+  LEECF  +  ++++LNPAKCTFG+ +G+FLGY+V++
Sbjct: 611  GKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKLNPAKCTFGVPSGEFLGYIVTK 670

Query: 126  RGIEANPEKIQAILDMKTPQSFKDVQRLTGRIAALRRFMSKS 1
            RGIEANP +I A L+M +P++FK+VQRLTGRIAAL RF+S+S
Sbjct: 671  RGIEANPNQINAFLNMPSPKNFKEVQRLTGRIAALNRFISRS 712


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  204 bits (519), Expect = 6e-51
 Identities = 97/162 (59%), Positives = 130/162 (80%)
 Frame = -3

Query: 486 LSFMDAFSGYHQISMCKEDIPKTTFITHRSVYAYKKMIFGLINAGATYQRMMNFIFDRQL 307
           L+FMDAFSG +QI M  ED  KT+FIT R +Y YK M FGL NAGATYQR++N +F   L
Sbjct: 108 LTFMDAFSGSNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHL 167

Query: 306 GRNMEVYVDDMIVKSMQVQKHLDDLEECFQTVRHHKLRLNPAKCTFGLGAGKFLGYLVSQ 127
           G+ MEVY+DDM+VKS++ + H+  LEECF  +  ++++LNPAKCTFG+ +G+FLGY+V++
Sbjct: 168 GKTMEVYIDDMLVKSLKKEDHVKHLEECFGILNKYQMKLNPAKCTFGVPSGEFLGYIVTE 227

Query: 126 RGIEANPEKIQAILDMKTPQSFKDVQRLTGRIAALRRFMSKS 1
           RGIEAN  +I A L+M +P++FK+VQRLTGRIAAL RF+S+S
Sbjct: 228 RGIEANSNQINAFLNMPSPRNFKEVQRLTGRIAALNRFISRS 269


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score =  202 bits (513), Expect = 3e-50
 Identities = 95/162 (58%), Positives = 130/162 (80%)
 Frame = -3

Query: 486  LSFMDAFSGYHQISMCKEDIPKTTFITHRSVYAYKKMIFGLINAGATYQRMMNFIFDRQL 307
            LSFMDAFSGY+QI M K+D  KT+FI  R  Y YK M FGL N GA YQR++N +F  QL
Sbjct: 584  LSFMDAFSGYNQIPMHKDDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMFAPQL 643

Query: 306  GRNMEVYVDDMIVKSMQVQKHLDDLEECFQTVRHHKLRLNPAKCTFGLGAGKFLGYLVSQ 127
            G+ MEVY+DDM+VKS +   H+D L+ CF+T+  + ++LNPAKC FG+ +G+FLGY+V++
Sbjct: 644  GKTMEVYIDDMLVKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFLGYIVTK 703

Query: 126  RGIEANPEKIQAILDMKTPQSFKDVQRLTGRIAALRRFMSKS 1
            RGIEANP++I+AILD+++P++ K+VQRLTGRIA L RF+++S
Sbjct: 704  RGIEANPKQIRAILDLQSPRNKKEVQRLTGRIAGLNRFIARS 745


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  200 bits (509), Expect = 9e-50
 Identities = 93/162 (57%), Positives = 131/162 (80%)
 Frame = -3

Query: 486  LSFMDAFSGYHQISMCKEDIPKTTFITHRSVYAYKKMIFGLINAGATYQRMMNFIFDRQL 307
            LSFMDAFSGY+QI M K+D  KT+F+T R  Y YK M FGL NAGATYQR +N +   Q+
Sbjct: 911  LSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRFVNKMLADQI 970

Query: 306  GRNMEVYVDDMIVKSMQVQKHLDDLEECFQTVRHHKLRLNPAKCTFGLGAGKFLGYLVSQ 127
            GR +EVY+DDM+VKS++ + H++ L +CF  +  + ++LNP KCTFG+ +G+FLGY+V++
Sbjct: 971  GRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTK 1030

Query: 126  RGIEANPEKIQAILDMKTPQSFKDVQRLTGRIAALRRFMSKS 1
            RGIEANP++I+AIL++ +P++ ++VQRLTGRIAAL RF+S+S
Sbjct: 1031 RGIEANPKQIRAILELPSPRNAREVQRLTGRIAALNRFISRS 1072


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  199 bits (507), Expect = 2e-49
 Identities = 93/162 (57%), Positives = 129/162 (79%)
 Frame = -3

Query: 486  LSFMDAFSGYHQISMCKEDIPKTTFITHRSVYAYKKMIFGLINAGATYQRMMNFIFDRQL 307
            LSFMDAFSGY+QI M + D  KT FIT +  Y YK M FGL NAGATY R++N +F  QL
Sbjct: 869  LSFMDAFSGYNQILMHQNDREKTVFITDQGTYCYKVMPFGLKNAGATYPRLVNQMFTDQL 928

Query: 306  GRNMEVYVDDMIVKSMQVQKHLDDLEECFQTVRHHKLRLNPAKCTFGLGAGKFLGYLVSQ 127
              +MEVY+DDM+VKS++ ++H+  L +CFQ +  + ++LNP+KCTFG+ +G+FLGYLV++
Sbjct: 929  DHSMEVYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYLVTR 988

Query: 126  RGIEANPEKIQAILDMKTPQSFKDVQRLTGRIAALRRFMSKS 1
            RGIEANP++I AI+D+ +P++ ++VQRL GRIAAL RF+S+S
Sbjct: 989  RGIEANPKQISAIIDLPSPRNTREVQRLIGRIAALNRFISRS 1030