BLASTX nr result
ID: Panax21_contig00011035
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00011035
(1540 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|... 499 e-139
gb|AFK41173.1| unknown [Lotus japonicus] 483 e-134
ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-li... 483 e-134
ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-li... 480 e-133
ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-li... 439 e-121
>ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|223535752|gb|EEF37414.1|
exonuclease, putative [Ricinus communis]
Length = 504
Score = 499 bits (1285), Expect = e-139
Identities = 260/472 (55%), Positives = 347/472 (73%), Gaps = 8/472 (1%)
Frame = -2
Query: 1539 SKGGWKDFLSLFDKKFGASLSDPSKRSTDVLLAFLKTFSQENDMKYFEKVMECHVNRDAV 1360
++GGWK+FL+++DKK G+SLSDP+KR+ L++FL+TF+ ++D+K+ + V+ H NR+ +
Sbjct: 28 TQGGWKEFLNVYDKKIGSSLSDPAKRTRPTLVSFLQTFTHKSDLKFVDYVLRLHSNREVL 87
Query: 1359 ENFQKKSTDIESPEQKLVRLTLEHHQYPSNYSFPSHEEGWLVTKRNKKSKAMRSTALVSV 1180
+ +++S D ESPEQ+LVRLT+EH Y S Y+FPS+++GW+VTK KKSK M + +++++
Sbjct: 88 DQIRQESPDNESPEQRLVRLTVEHPFYLSKYAFPSYDQGWVVTKLPKKSKLMSTDSIIAI 147
Query: 1179 DCEMVLCEDGTEALVRVCVVDRNLEVKLDKLVNPNKAVADYRTEITGISSEDLDGETCSL 1000
DCEMVLCEDGTEALVRVCVVDRNL+VKLD+ VNP K VADYRTEITG+++ DLDG +CSL
Sbjct: 148 DCEMVLCEDGTEALVRVCVVDRNLQVKLDEKVNPYKPVADYRTEITGVTARDLDGVSCSL 207
Query: 999 IYVQKSLKNLLRDGTILVGHSLNNDLQALKLDHARVIDTSLVFKYADGSNFRRPSLNDLC 820
+QK +K LL+ GTILVGH L NDLQALKLDHARV+DTS +F+ DG R PSL+ LC
Sbjct: 208 ADIQKFMKKLLQKGTILVGHGLYNDLQALKLDHARVVDTSFIFRRLDG---RPPSLDTLC 264
Query: 819 KAVLGFELRKKGAPHNCLDDASAAMKLVLAYIEGGVDNVVPFFQKDVLEKEMTKLLVHRI 640
K+VLGFELRK GAPHNC+DDASAAMKL LA IE GVDN +P + VLE E+ KLL+H I
Sbjct: 265 KSVLGFELRKGGAPHNCMDDASAAMKLFLAKIERGVDNDIPVNHEHVLENELAKLLLHGI 324
Query: 639 PISLPKEELHKIIPGDFIIEMKSNKKAGGGKYSALAIFGNQQQANEAFQDLDGKQEQDSS 460
P + EELH++ P F IE+K KK G +YSALAIF + Q+A+ AF +L+G+ E+D +
Sbjct: 325 PTDVHSEELHRVFPEQFTIELKPPKK-GRVQYSALAIFKDPQEAHCAFDNLNGRLEKDKN 383
Query: 459 GRPQKLISFKLNSGVTGSLCVCKMTRDDQLGQTTSKKRSQEDETPVESKKLKLD------ 298
G QK+I+ KL +G T +L V KM D + Q KKR+ + E +KKLK D
Sbjct: 384 GLLQKMITLKLKTGATANLYVRKMGHDHFIHQDLQKKRAFQGEDIGNTKKLKRDDCDDHV 443
Query: 297 QTIRGLDQTQAGSKL--CDDHLKEIERLKLQLSLRDQEISNLNKIIVGLTRK 148
+ I L Q L CDDH+KEIE+LK LS ++ +IS +KII L ++
Sbjct: 444 KEIERLKQELKEKDLSKCDDHMKEIEKLKQNLSSKEFQISTQDKIITKLKKE 495
>gb|AFK41173.1| unknown [Lotus japonicus]
Length = 525
Score = 483 bits (1242), Expect = e-134
Identities = 255/459 (55%), Positives = 330/459 (71%), Gaps = 5/459 (1%)
Frame = -2
Query: 1533 GGWKDFLSLFDKKFGASLSDPSKRSTDVLLAFLKTFSQENDMKYFEKVMECHVNRDAVEN 1354
G WK+FL+ +DKKFGAS+SDP+KR+ +VL AFLKTFS+E+D+K+F +M H N+ +VE
Sbjct: 33 GDWKEFLNSYDKKFGASMSDPAKRTHEVLAAFLKTFSKEDDLKFFANIMRHHSNQYSVEK 92
Query: 1353 FQKKSTDIESPEQKLVRLTLEHHQYPSNYSFPSHEEGWLVTKRNKKSKAMRSTALVSVDC 1174
+ KS D SPEQ LV++TL+H YP +YSF S +EGW++ K KAMRSTA+V+VDC
Sbjct: 93 LKDKSHD--SPEQGLVQITLQHPLYPLDYSFQSIDEGWVIINLRKNKKAMRSTAMVAVDC 150
Query: 1173 EMVLCEDGTEALVRVCVVDRNLEVKLDKLVNPNKAVADYRTEITGISSEDLDGETCSLIY 994
EMVLCEDGTEALV VCVVD NL+VKL K V P+KA+ DYRTE+TG+SS DL+ TC+L
Sbjct: 151 EMVLCEDGTEALVEVCVVDHNLKVKLHKRVKPDKAIVDYRTEVTGVSSRDLETVTCTLAD 210
Query: 993 VQKSLKNLLRDGTILVGHSLNNDLQALKLDHARVIDTSLVFKYADGSNFRRPSLNDLCKA 814
+QK +K LL +GTILVGHSL+NDL+ LKLDH RV+DT+ +F+ GS R+PSLN LC+A
Sbjct: 211 IQKKMKRLLSNGTILVGHSLDNDLRVLKLDHVRVVDTAYIFQSLGGSIHRKPSLNGLCQA 270
Query: 813 VLGFELRKKGAPHNCLDDASAAMKLVLAYIEGGVDNVVPF--FQKDVLEKEMTKLLVHRI 640
VLG+E+R+KGAPHNCLDDA AAMKLVLA I+ GVD PF Q+ V E +MTKL +H I
Sbjct: 271 VLGYEVREKGAPHNCLDDACAAMKLVLARIKHGVDKEFPFTLVQEHVSESDMTKLPLHGI 330
Query: 639 PISLPKEELHKIIPGDFIIEMKSNKKAGGGKYSALAIFGNQQQANEAFQDLDGKQEQDSS 460
P S+ E LHKI+PGDF E+K ++K KYSALA F NQQ+A EA++++ G Q +DS
Sbjct: 331 PTSVNIETLHKIVPGDFTTEVKPSRKGQRAKYSALATFKNQQEAYEAYENVQGSQTKDSF 390
Query: 459 GRPQKLISFKLNSGVTGSLCVCKMTRDDQLGQTTSKKRSQEDETPVESKKLKLDQTIRGL 280
GRPQK + F+ ++G+T SL V KMT D+ SK+ Q DE K +T+ +
Sbjct: 391 GRPQKEVMFRPSTGMTVSLFVRKMTADEPDNLLQSKRALQVDEADEAVNASKKAKTVPQI 450
Query: 279 DQ-TQAGSKLCD--DHLKEIERLKLQLSLRDQEISNLNK 172
++ GS D HLKEIE L QL +D EI +L +
Sbjct: 451 EEDVLIGSTKGDTCTHLKEIEALNEQLKQKDLEIESLRE 489
>ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-like [Glycine max]
Length = 509
Score = 483 bits (1242), Expect = e-134
Identities = 258/482 (53%), Positives = 337/482 (69%), Gaps = 16/482 (3%)
Frame = -2
Query: 1533 GGWKDFLSLFDKKFGASLSDPSKRSTDVLLAFLKTFSQENDMKYFEKVMECHVNRDAVEN 1354
GGWK+FL+ DKKFGA LSDPSKRS +VL AFLKTFS+E D+K+F+ +M H N+ +E
Sbjct: 30 GGWKEFLNSHDKKFGAGLSDPSKRSHEVLAAFLKTFSKEEDLKFFDNIMRHHSNQYMLER 89
Query: 1353 FQKKSTDIESPEQKLVRLTLEHHQYPSNYSFPSHEEGWLVTKRNKKSKAMRSTALVSVDC 1174
+ KS D SPEQ+LV+ TL+H YP +YSFPS +EGW+V K K M+ST +V+VDC
Sbjct: 90 LKDKSHD--SPEQRLVQATLQHPLYPLDYSFPSIDEGWIVVNFKNKPKVMKSTEMVAVDC 147
Query: 1173 EMVLCEDGTEALVRVCVVDRNLEVKLDKLVNPNKAVADYRTEITGISSEDLDGETCSLIY 994
EMVLCEDGTEA+V+VCVVD NLEVKLDKLV P+K +ADYRTEITG+SS+DL+ TCSL
Sbjct: 148 EMVLCEDGTEAVVKVCVVDHNLEVKLDKLVKPDKEIADYRTEITGVSSQDLEAVTCSLAD 207
Query: 993 VQKSLKNLLRDGTILVGHSLNNDLQALKLDHARVIDTSLVFKYADGSNFRRPSLNDLCKA 814
+QK +K LL G ILVGHSL+NDL+ LKLDH RVIDTS +F+ DGS +RPSLN LC+A
Sbjct: 208 IQKYMKKLLSSGIILVGHSLHNDLRVLKLDHVRVIDTSYIFQSLDGSIHKRPSLNSLCQA 267
Query: 813 VLGFELRKKGAPHNCLDDASAAMKLVLAYIEGGVDNVVP--FFQKDVLEKEMTKLLVHRI 640
VL E+R+KGAPHNCLDDA AAM LVLA I+ GVD P Q+ V E E+ KLL+H+I
Sbjct: 268 VLHHEVREKGAPHNCLDDAKAAMDLVLAKIKHGVDKEFPIALVQEHVPESELAKLLLHKI 327
Query: 639 PISLPKEELHKIIPGDFIIEMKSNKKAGGGKYSALAIFGNQQQANEAFQDLDGKQEQDSS 460
P ++ E LHKI+PG+F IE+K ++K G YSA AIF + +A+ A++++ G Q +D+
Sbjct: 328 PNTVNIETLHKILPGNFKIELKPSRKGQGANYSAFAIFRSPPEADGAYENVQGSQLKDTY 387
Query: 459 GRPQKLISFKLNSGVTGSLCVCKMTRDDQLGQTTSKKRSQEDETPVESKKLKLDQTIRGL 280
G PQKL++F+L++G++ +L V KM ++ QT SK+ Q +E SKK K+D I
Sbjct: 388 GHPQKLVTFRLSTGLSVNLFVRKMVTEEPNDQTPSKRALQINEAVDVSKKAKMDPKIEED 447
Query: 279 DQTQAGSKLCDDHLKE--------------IERLKLQLSLRDQEISNLNKIIVGLTRKQR 142
G D H KE IE L+ QL+ +D EIS L+K+I +K++
Sbjct: 448 ASAGFGKGDTDAHSKEIEALNQQLKQSEMVIESLRKQLTQKDFEISMLHKMISSKKKKKQ 507
Query: 141 GV 136
V
Sbjct: 508 TV 509
>ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-like [Cucumis sativus]
gi|449517369|ref|XP_004165718.1| PREDICTED: small RNA
degrading nuclease 3-like [Cucumis sativus]
Length = 524
Score = 480 bits (1236), Expect = e-133
Identities = 254/451 (56%), Positives = 332/451 (73%), Gaps = 3/451 (0%)
Frame = -2
Query: 1539 SKGGWKDFLSLFDKKFGASLSDPSKRSTDVLLAFLKTFSQENDMKYFEKVMECHVNRDAV 1360
S+G WK+FL+ D KFGAS+SDPSKR D+L+AFLKTF +E D+ + +KV +C+ R+ V
Sbjct: 28 SEGDWKEFLNSRDPKFGASMSDPSKRPNDLLIAFLKTFDKEEDLMFLDKVFQCNEKRNFV 87
Query: 1359 ENFQKKSTDIESPEQKLVRLTLEHHQYPSNYSFPSHEEGWLVTKRNKKSKAMRSTALVSV 1180
+ + + + ESPEQKLVRLTLEH QYP YSFPS+++ W+VTK ++KSK S + ++
Sbjct: 88 KQVSQITPENESPEQKLVRLTLEHPQYPLEYSFPSYDKEWVVTKFSQKSKGPNSNLIYAI 147
Query: 1179 DCEMVLCEDGTEALVRVCVVDRNLEVKLDKLVNPNKAVADYRTEITGISSEDLDGETCSL 1000
DCEMVLCEDGTE LVRVC+VDR+L+VK+D+LV P KA+ DYRT+ITGIS DLDG +CSL
Sbjct: 148 DCEMVLCEDGTENLVRVCMVDRDLQVKIDELVKPRKAIKDYRTDITGISPGDLDGVSCSL 207
Query: 999 IYVQKSLKNLLRDG-TILVGHSLNNDLQALKLDHARVIDTSLVFKYADGSNFRRPSLNDL 823
VQKS+ L G TILVGHSLNNDLQALKLDH+RVIDTS +FKY++GS +RRPSL+ L
Sbjct: 208 ADVQKSITKFLSHGRTILVGHSLNNDLQALKLDHSRVIDTSFIFKYSNGSIYRRPSLSKL 267
Query: 822 CKAVLGFELRKKGAPHNCLDDASAAMKLVLAYIEGGVDNVVPFFQKDVLEKEMTKLLVHR 643
CK+VLG++LRK+GAPHNCLDDA AAMKLVLA +E D+ + +D + M KLL+HR
Sbjct: 268 CKSVLGYDLRKEGAPHNCLDDAQAAMKLVLAKLESKADDGIAIVDEDTPQVGMEKLLLHR 327
Query: 642 IPISLPKEELHKIIPGDFIIEMKSNKKAGGGK-YSALAIFGNQQQANEAFQDLDGKQEQD 466
IPI++P E L K I GDF IE+K KK GG YSALAIF N ++A +AF++++G +D
Sbjct: 328 IPINVPSEALAKAIHGDFTIELKPPKKGQGGDIYSALAIFQNPKEALQAFEEVEGNAYED 387
Query: 465 SSGRPQKLISFKLNSGVTGSLCVCKMTRDDQLGQTTSKKRSQE-DETPVESKKLKLDQTI 289
SSGRPQKLI F+ +SG S+ V KM + D + +SKKR E E V SKK K +
Sbjct: 388 SSGRPQKLIRFQ-HSGSIVSIYVRKMGQKDFMDNFSSKKRDLEVIENIVMSKKQKTANKM 446
Query: 288 RGLDQTQAGSKLCDDHLKEIERLKLQLSLRD 196
+T + S C +H++E+ERLK +L ++
Sbjct: 447 E--IETISNSSRCCNHVEEVERLKQELKQKE 475
>ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-like [Vitis vinifera]
Length = 389
Score = 439 bits (1130), Expect = e-121
Identities = 208/320 (65%), Positives = 264/320 (82%)
Frame = -2
Query: 1539 SKGGWKDFLSLFDKKFGASLSDPSKRSTDVLLAFLKTFSQENDMKYFEKVMECHVNRDAV 1360
SKG WKDFLS +D+K G SLSDPS+R D L++FLKTFS+E D+K+F K+++C+ NR V
Sbjct: 28 SKGSWKDFLSTYDRKLGPSLSDPSRRPVDTLVSFLKTFSKEEDLKFFAKILQCYANRKVV 87
Query: 1359 ENFQKKSTDIESPEQKLVRLTLEHHQYPSNYSFPSHEEGWLVTKRNKKSKAMRSTALVSV 1180
E F+ KS ESPEQ+L+RLTLEH QYP +YSFPSHEEGW+VTK +K K RS A+++V
Sbjct: 88 EEFKTKSHGKESPEQRLIRLTLEHPQYPLDYSFPSHEEGWMVTKIRQKFKFTRSNAMLAV 147
Query: 1179 DCEMVLCEDGTEALVRVCVVDRNLEVKLDKLVNPNKAVADYRTEITGISSEDLDGETCSL 1000
DCEMVLCEDGTE LVRVCVVDRNL+VKL++LV P+KAV DYRTEITG+S++D D T SL
Sbjct: 148 DCEMVLCEDGTEGLVRVCVVDRNLQVKLNELVKPHKAVVDYRTEITGVSAKDFDETTSSL 207
Query: 999 IYVQKSLKNLLRDGTILVGHSLNNDLQALKLDHARVIDTSLVFKYADGSNFRRPSLNDLC 820
+ +Q+S+K LL G +LVGHSL+NDL+ALKLDHARVIDT+ ++KY + RRPSLN+LC
Sbjct: 208 VDIQRSMKKLLSHGAVLVGHSLHNDLKALKLDHARVIDTAFIYKYENQPINRRPSLNNLC 267
Query: 819 KAVLGFELRKKGAPHNCLDDASAAMKLVLAYIEGGVDNVVPFFQKDVLEKEMTKLLVHRI 640
K++LG+E+R+K APHNCLDDASAAMKLVLA +E G+D+ +PF +DV E EM KLL+HRI
Sbjct: 268 KSILGYEVRQKDAPHNCLDDASAAMKLVLAKLEQGLDDAIPFVHEDVPENEMAKLLLHRI 327
Query: 639 PISLPKEELHKIIPGDFIIE 580
P +P EEL++IIPG+F +E
Sbjct: 328 PTDVPIEELNRIIPGEFTME 347