BLASTX nr result

ID: Panax21_contig00010964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010964
         (1918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   531   e-170
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   523   e-167
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   530   e-166
ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor ...   524   e-166
ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU...   524   e-166

>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score =  531 bits (1369), Expect(2) = e-170
 Identities = 256/326 (78%), Positives = 287/326 (88%)
 Frame = +2

Query: 422  RDRQFVYNRFRPWRTCRDDGGALLMCMTFLGDSSRIVAGCHSGELKVFDSDNSNMLESCT 601
            RDRQF+Y+RFRPWRTCRDDG  LL  + FLGDS++I AG HSGELK FD ++S MLES T
Sbjct: 1584 RDRQFIYSRFRPWRTCRDDGNGLLTSLAFLGDSAQIAAGSHSGELKFFDCNSSTMLESFT 1643

Query: 602  SHQYPLTIVQSYFHGDTQLILSSSSHDVRLWDAPSVSAGPRHSFEGCKAARLSNSGSRFA 781
             HQYPLT+VQSY  GDTQL+LSSSSHDVRLWDA S+S GPRH F+GCKAAR SNSG+ FA
Sbjct: 1644 GHQYPLTLVQSYLSGDTQLVLSSSSHDVRLWDASSISGGPRHPFDGCKAARFSNSGTIFA 1703

Query: 782  ALSLELTQREILLYDIQTCNLDFKLTDTSSSPSGRGNVYSLVHFSPSDTMLLWNGVLWDH 961
            ALS E ++REIL+YDIQT  LD KL DTS+S +GRG+VY L+HFSPSDTMLLWNGVLWD 
Sbjct: 1704 ALSSESSRREILVYDIQTLQLDLKLADTSASSAGRGHVYPLIHFSPSDTMLLWNGVLWDR 1763

Query: 962  RESRPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKLRLLRSVPSLDQTVITFNASGD 1141
            R S PVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRK RLLR+VPSLDQTVITFN+ GD
Sbjct: 1764 RGSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRTVPSLDQTVITFNSRGD 1823

Query: 1142 VIYATLRRNIDDVTSALNTRRVKHPLYSAFRTVDAVNYSDIATIPVDRRVLDIATEPTDS 1321
            VIYA LRRN++D+ SA+++RR KHPL+SAFRTVDAVNYSDIATI VDR VLD ATEPTDS
Sbjct: 1824 VIYAILRRNLEDIMSAVHSRRAKHPLFSAFRTVDAVNYSDIATITVDRCVLDFATEPTDS 1883

Query: 1322 FVGLVTMDDPDEMYSSARVYEIGRRR 1399
            FVGLV+MDD DEM+SSAR+YEIGRRR
Sbjct: 1884 FVGLVSMDDHDEMFSSARMYEIGRRR 1909



 Score = 94.4 bits (233), Expect(2) = e-170
 Identities = 56/110 (50%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
 Frame = +1

Query: 1    KGSLLTDANVFYTPSYSLKDNHGR----LVQLDNLEDSHNN-SNLGQVTPS-LQHGLLND 162
            K +LL DA  F TP  + +D +GR     V  DNL+D+     +LGQ+TPS  Q G LND
Sbjct: 1447 KSNLLNDAIGFSTPCCTPRDQYGRPTPSSVLTDNLDDNQCGIPHLGQMTPSSFQLGSLND 1506

Query: 163  PQPTNTERLTLDSLVIQYLKNQHRQCPAXXXXXXXXXXXXXXVCPESRRS 312
            P   NTERLTLDSLV+QYLK+QHRQCPA              +CPE RRS
Sbjct: 1507 PHTGNTERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHICPEPRRS 1556


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1857

 Score =  523 bits (1348), Expect(2) = e-167
 Identities = 250/326 (76%), Positives = 286/326 (87%)
 Frame = +2

Query: 422  RDRQFVYNRFRPWRTCRDDGGALLMCMTFLGDSSRIVAGCHSGELKVFDSDNSNMLESCT 601
            RDRQFVY+RF+PWRTCRDD GALL C+TF+GDSS I  G H+GELK FDS+NSN++ES T
Sbjct: 1419 RDRQFVYSRFKPWRTCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFDSNNSNVVESYT 1478

Query: 602  SHQYPLTIVQSYFHGDTQLILSSSSHDVRLWDAPSVSAGPRHSFEGCKAARLSNSGSRFA 781
             HQ PLT VQS+  G+TQL+LSSSS DVRLWDA S+  GP HSFEGCKAAR SNSG+ FA
Sbjct: 1479 GHQSPLTHVQSFVSGETQLLLSSSSQDVRLWDATSILGGPSHSFEGCKAARFSNSGNVFA 1538

Query: 782  ALSLELTQREILLYDIQTCNLDFKLTDTSSSPSGRGNVYSLVHFSPSDTMLLWNGVLWDH 961
            ALS E  +REI LYDIQTC+L+   +DT ++ +GRG+VYSL+HF+PSD+MLLWNGVLWD 
Sbjct: 1539 ALSSESARREIRLYDIQTCHLESNFSDTFAASTGRGHVYSLIHFNPSDSMLLWNGVLWDR 1598

Query: 962  RESRPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKLRLLRSVPSLDQTVITFNASGD 1141
            R+S PVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRK RLLRSVPSLDQT ITFNA GD
Sbjct: 1599 RDSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGD 1658

Query: 1142 VIYATLRRNIDDVTSALNTRRVKHPLYSAFRTVDAVNYSDIATIPVDRRVLDIATEPTDS 1321
            V+YA LRRN++DV SA++TRRVKHPL++AFRTVDA+NYSDIATIPVDR VLD A EPTDS
Sbjct: 1659 VMYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFAAEPTDS 1718

Query: 1322 FVGLVTMDDPDEMYSSARVYEIGRRR 1399
            FVGL+TMDD DEMY+SAR+YEIGRRR
Sbjct: 1719 FVGLITMDDQDEMYASARIYEIGRRR 1744



 Score = 92.8 bits (229), Expect(2) = e-167
 Identities = 51/104 (49%), Positives = 67/104 (64%)
 Frame = +1

Query: 1    KGSLLTDANVFYTPSYSLKDNHGRLVQLDNLEDSHNNSNLGQVTPSLQHGLLNDPQPTNT 180
            K SL TDA   +TP+ +LK +      +D ++++ + SNLGQ+TPS Q  +LND QP N 
Sbjct: 1293 KSSLQTDAVGLFTPTCNLKQSR---CTIDLVDENQSISNLGQMTPSSQ--VLNDLQPNNA 1347

Query: 181  ERLTLDSLVIQYLKNQHRQCPAXXXXXXXXXXXXXXVCPESRRS 312
            ER+TLDSLV+QYLK+QHRQCPA              VCPE +RS
Sbjct: 1348 ERVTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRS 1391


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1868

 Score =  530 bits (1365), Expect(2) = e-166
 Identities = 253/326 (77%), Positives = 289/326 (88%)
 Frame = +2

Query: 422  RDRQFVYNRFRPWRTCRDDGGALLMCMTFLGDSSRIVAGCHSGELKVFDSDNSNMLESCT 601
            RDRQFVY+RFRPWRTCRDD GALL C+TF+GDSS I  G H+GELK FDS+NSN++ES T
Sbjct: 1430 RDRQFVYSRFRPWRTCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFDSNNSNVVESYT 1489

Query: 602  SHQYPLTIVQSYFHGDTQLILSSSSHDVRLWDAPSVSAGPRHSFEGCKAARLSNSGSRFA 781
             HQ PLT+VQS+  G+TQL+LSSSS DVRLWDA S+  GP HSFEGCKAAR SNSG+ FA
Sbjct: 1490 GHQSPLTLVQSFVSGETQLLLSSSSQDVRLWDATSILGGPSHSFEGCKAARFSNSGNVFA 1549

Query: 782  ALSLELTQREILLYDIQTCNLDFKLTDTSSSPSGRGNVYSLVHFSPSDTMLLWNGVLWDH 961
            ALS E  +REILLYDIQTC+++ KL+DT ++ +GRG+VYSL+HF+PSD+MLLWNGVLWD 
Sbjct: 1550 ALSSESARREILLYDIQTCHIESKLSDTFAASTGRGHVYSLIHFNPSDSMLLWNGVLWDR 1609

Query: 962  RESRPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKLRLLRSVPSLDQTVITFNASGD 1141
            R S PVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRK RLLRSVPSLDQT ITFNA GD
Sbjct: 1610 RVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGD 1669

Query: 1142 VIYATLRRNIDDVTSALNTRRVKHPLYSAFRTVDAVNYSDIATIPVDRRVLDIATEPTDS 1321
            V+YA LRRN++DV SA++TRRVKHPL++AFRTVDA+NYSDIATIPVDR VLD A EPTDS
Sbjct: 1670 VMYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFAAEPTDS 1729

Query: 1322 FVGLVTMDDPDEMYSSARVYEIGRRR 1399
            FVGL+TMDD DEMY+SAR+YEIGRRR
Sbjct: 1730 FVGLITMDDQDEMYASARIYEIGRRR 1755



 Score = 85.5 bits (210), Expect(2) = e-166
 Identities = 48/104 (46%), Positives = 65/104 (62%)
 Frame = +1

Query: 1    KGSLLTDANVFYTPSYSLKDNHGRLVQLDNLEDSHNNSNLGQVTPSLQHGLLNDPQPTNT 180
            K  L +DA   ++P+ +LK +       D ++++H+ SNL Q+TPS Q  +LND QP N 
Sbjct: 1304 KSCLQSDAVGLFSPTCNLKQSR---CMGDLVDENHSISNLVQMTPSSQ--VLNDLQPNNA 1358

Query: 181  ERLTLDSLVIQYLKNQHRQCPAXXXXXXXXXXXXXXVCPESRRS 312
            ER+TLDSLV+QYLK+QHRQCPA              VCPE +RS
Sbjct: 1359 ERVTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRS 1402


>ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Cucumis
            sativus]
          Length = 1915

 Score =  524 bits (1349), Expect(2) = e-166
 Identities = 254/326 (77%), Positives = 287/326 (88%)
 Frame = +2

Query: 422  RDRQFVYNRFRPWRTCRDDGGALLMCMTFLGDSSRIVAGCHSGELKVFDSDNSNMLESCT 601
            RDRQFVY+RFRPWRTCRDD  ALL C+TFLGDS RI  G HSGE+K+FDS++S++LESCT
Sbjct: 1479 RDRQFVYSRFRPWRTCRDDASALLTCLTFLGDS-RIAVGSHSGEVKIFDSNSSSILESCT 1537

Query: 602  SHQYPLTIVQSYFHGDTQLILSSSSHDVRLWDAPSVSAGPRHSFEGCKAARLSNSGSRFA 781
            SHQ PLTI++S+   DTQL+LSSSS DVRLWDA S+S GP HSFEGCKAAR SN+G+ FA
Sbjct: 1538 SHQSPLTIMESFTSDDTQLVLSSSSLDVRLWDASSISGGPMHSFEGCKAARFSNAGNIFA 1597

Query: 782  ALSLELTQREILLYDIQTCNLDFKLTDTSSSPSGRGNVYSLVHFSPSDTMLLWNGVLWDH 961
            A++ E  +REILLYDIQTC L+ KL+DT+ S +GRG+ YS VHFSPSDTMLLWNGVLWD 
Sbjct: 1598 AMASEPARREILLYDIQTCQLELKLSDTNVSSAGRGHAYSHVHFSPSDTMLLWNGVLWDR 1657

Query: 962  RESRPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKLRLLRSVPSLDQTVITFNASGD 1141
            R   PVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRK RLLRSVPSLDQT ITFNASGD
Sbjct: 1658 RGPGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTAITFNASGD 1717

Query: 1142 VIYATLRRNIDDVTSALNTRRVKHPLYSAFRTVDAVNYSDIATIPVDRRVLDIATEPTDS 1321
            VIYA LRRN++DV SA++TRRVKHPL++AFRT+DAVNYSDIATIP+DR VLD  TE TDS
Sbjct: 1718 VIYAILRRNLEDVMSAVHTRRVKHPLFAAFRTIDAVNYSDIATIPLDRCVLDFTTEKTDS 1777

Query: 1322 FVGLVTMDDPDEMYSSARVYEIGRRR 1399
            FVGL+TMDD DEM+SSARVYEIGRRR
Sbjct: 1778 FVGLITMDDQDEMFSSARVYEIGRRR 1803



 Score = 91.3 bits (225), Expect(2) = e-166
 Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
 Frame = +1

Query: 1    KGSLLTDANVFYTPSYS-LKDNHGRLVQ----LDNLEDSHNNSNLGQVTPSLQHGLLNDP 165
            K SL+TD   F TPS + ++D  GR        D L+++  ++ +G VTPS   G LNDP
Sbjct: 1344 KSSLITDVG-FSTPSTTNMRDQLGRPAPGGFWTDCLDENQGSTQIGLVTPSSHPGNLNDP 1402

Query: 166  QPTNTERLTLDSLVIQYLKNQHRQCPAXXXXXXXXXXXXXXVCPESRRS 312
            QP+N+ER+TLDSLV+QYLK+QHRQCP               VCPE +RS
Sbjct: 1403 QPSNSERITLDSLVVQYLKHQHRQCPTPITTLPPLSLLQPHVCPEPKRS 1451


>ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
            homolog 1-like [Cucumis sativus]
          Length = 1900

 Score =  524 bits (1349), Expect(2) = e-166
 Identities = 254/326 (77%), Positives = 287/326 (88%)
 Frame = +2

Query: 422  RDRQFVYNRFRPWRTCRDDGGALLMCMTFLGDSSRIVAGCHSGELKVFDSDNSNMLESCT 601
            RDRQFVY+RFRPWRTCRDD  ALL C+TFLGDS RI  G HSGE+K+FDS++S++LESCT
Sbjct: 1464 RDRQFVYSRFRPWRTCRDDASALLTCLTFLGDS-RIAVGSHSGEVKIFDSNSSSILESCT 1522

Query: 602  SHQYPLTIVQSYFHGDTQLILSSSSHDVRLWDAPSVSAGPRHSFEGCKAARLSNSGSRFA 781
            SHQ PLTI++S+   DTQL+LSSSS DVRLWDA S+S GP HSFEGCKAAR SN+G+ FA
Sbjct: 1523 SHQSPLTIMESFTSDDTQLVLSSSSLDVRLWDASSISGGPMHSFEGCKAARFSNAGNIFA 1582

Query: 782  ALSLELTQREILLYDIQTCNLDFKLTDTSSSPSGRGNVYSLVHFSPSDTMLLWNGVLWDH 961
            A++ E  +REILLYDIQTC L+ KL+DT+ S +GRG+ YS VHFSPSDTMLLWNGVLWD 
Sbjct: 1583 AMASEPARREILLYDIQTCQLELKLSDTNVSSAGRGHAYSHVHFSPSDTMLLWNGVLWDR 1642

Query: 962  RESRPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKLRLLRSVPSLDQTVITFNASGD 1141
            R   PVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRK RLLRSVPSLDQT ITFNASGD
Sbjct: 1643 RGPGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTAITFNASGD 1702

Query: 1142 VIYATLRRNIDDVTSALNTRRVKHPLYSAFRTVDAVNYSDIATIPVDRRVLDIATEPTDS 1321
            VIYA LRRN++DV SA++TRRVKHPL++AFRT+DAVNYSDIATIP+DR VLD  TE TDS
Sbjct: 1703 VIYAILRRNLEDVMSAVHTRRVKHPLFAAFRTIDAVNYSDIATIPLDRCVLDFTTEKTDS 1762

Query: 1322 FVGLVTMDDPDEMYSSARVYEIGRRR 1399
            FVGL+TMDD DEM+SSARVYEIGRRR
Sbjct: 1763 FVGLITMDDQDEMFSSARVYEIGRRR 1788



 Score = 91.3 bits (225), Expect(2) = e-166
 Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
 Frame = +1

Query: 1    KGSLLTDANVFYTPSYS-LKDNHGRLVQ----LDNLEDSHNNSNLGQVTPSLQHGLLNDP 165
            K SL+TD   F TPS + ++D  GR        D L+++  ++ +G VTPS   G LNDP
Sbjct: 1329 KSSLITDVG-FSTPSTTNMRDQLGRPAPGGFWTDCLDENQGSTQIGLVTPSSHPGNLNDP 1387

Query: 166  QPTNTERLTLDSLVIQYLKNQHRQCPAXXXXXXXXXXXXXXVCPESRRS 312
            QP+N+ER+TLDSLV+QYLK+QHRQCP               VCPE +RS
Sbjct: 1388 QPSNSERITLDSLVVQYLKHQHRQCPTPITTLPPLSLLQPHVCPEPKRS 1436


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