BLASTX nr result

ID: Panax21_contig00010930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010930
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263213.1| PREDICTED: probable replication factor C sub...   349   9e-94
gb|AFK37872.1| unknown [Lotus japonicus]                              337   4e-90
ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|2...   336   8e-90
ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-li...   333   5e-89
ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycin...   333   5e-89

>ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera]
            gi|296089274|emb|CBI39046.3| unnamed protein product
            [Vitis vinifera]
          Length = 354

 Score =  349 bits (895), Expect = 9e-94
 Identities = 174/209 (83%), Positives = 180/209 (86%)
 Frame = +2

Query: 542  EAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAPKEEEIAKVLEFIAKK 721
            EAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLN+RINAP EE+I KVLEFIAKK
Sbjct: 145  EAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNIRINAPTEEQITKVLEFIAKK 204

Query: 722  EGLQLPSGFTSRIAEKSNRSLRRAVLSFETCRVQQYPFTNNQLIPPMDWEVYVSEIASDI 901
            EGLQLPSGF +RIAEKSNRSLRRA+LSFETCRVQQYPFTNNQ +PPMDWE YVSEIASDI
Sbjct: 205  EGLQLPSGFATRIAEKSNRSLRRAILSFETCRVQQYPFTNNQAMPPMDWEEYVSEIASDI 264

Query: 902  MKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRM 1081
            MKEQSPKRLFQVRGK+YELL NCIPP                      VCHWAAYYEHRM
Sbjct: 265  MKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLLELLKKLDAELKHEVCHWAAYYEHRM 324

Query: 1082 RLGQKAIFHIEAFVAKFMSIYKGFLIATF 1168
            RLGQKAIFHIEAFVAKFMSIYK FLIATF
Sbjct: 325  RLGQKAIFHIEAFVAKFMSIYKAFLIATF 353



 Score =  171 bits (433), Expect = 3e-40
 Identities = 80/89 (89%), Positives = 85/89 (95%)
 Frame = +3

Query: 117 MLWVDKYRPKALDKVIVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 296
           MLWVDKYRPK LD +IVH+DVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMA+LRQMFG
Sbjct: 1   MLWVDKYRPKTLDNLIVHDDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMAILRQMFG 60

Query: 297 ASVEKVKVENKTWKVDAGTRTIDLELTTL 383
            S +KVKVENKTWK+DAGTRTIDLELTTL
Sbjct: 61  PSADKVKVENKTWKIDAGTRTIDLELTTL 89


>gb|AFK37872.1| unknown [Lotus japonicus]
          Length = 354

 Score =  337 bits (863), Expect = 4e-90
 Identities = 163/209 (77%), Positives = 177/209 (84%)
 Frame = +2

Query: 542  EAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAPKEEEIAKVLEFIAKK 721
            EAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSRCLN+RINAP EE+I +V+EFI KK
Sbjct: 145  EAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNIRINAPSEEQIVEVIEFIGKK 204

Query: 722  EGLQLPSGFTSRIAEKSNRSLRRAVLSFETCRVQQYPFTNNQLIPPMDWEVYVSEIASDI 901
            EGLQ+PSGF +RIAEKSNR+LRRA+LSFETCRVQQYPFTN Q IPPMDWE Y+SEIASDI
Sbjct: 205  EGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQYPFTNRQTIPPMDWEEYISEIASDI 264

Query: 902  MKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRM 1081
            MKEQ+PKRLFQVRGK+YELL NCIPP                      VCHWAAYYEHRM
Sbjct: 265  MKEQNPKRLFQVRGKLYELLINCIPPEMILKRLLFELLRKLDAELKHEVCHWAAYYEHRM 324

Query: 1082 RLGQKAIFHIEAFVAKFMSIYKGFLIATF 1168
            RLGQKAIFHIEAFVAKFMS+YK FLIATF
Sbjct: 325  RLGQKAIFHIEAFVAKFMSVYKSFLIATF 353



 Score =  166 bits (419), Expect = 1e-38
 Identities = 78/89 (87%), Positives = 85/89 (95%)
 Frame = +3

Query: 117 MLWVDKYRPKALDKVIVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 296
           MLWVDKYRPK LD+V+VH+DVAQNLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQMFG
Sbjct: 1   MLWVDKYRPKTLDQVMVHDDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 297 ASVEKVKVENKTWKVDAGTRTIDLELTTL 383
            + EKVKVEN+TWKVDAG+R+IDLELTTL
Sbjct: 61  TAAEKVKVENRTWKVDAGSRSIDLELTTL 89


>ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|222862737|gb|EEF00244.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  336 bits (861), Expect = 8e-90
 Identities = 167/209 (79%), Positives = 178/209 (85%)
 Frame = +2

Query: 542  EAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAPKEEEIAKVLEFIAKK 721
            EAQHSLRRTMEKYSASCRLILCCNSSSKVTEA+RSRCLNVRINAPKEE+I KVLEFI KK
Sbjct: 145  EAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSRCLNVRINAPKEEQIVKVLEFIGKK 204

Query: 722  EGLQLPSGFTSRIAEKSNRSLRRAVLSFETCRVQQYPFTNNQLIPPMDWEVYVSEIASDI 901
            EGLQLP GF +RIA+KSNRSLRRA+LSFETCRVQQYPF++NQ IPPMDWE YVSEI SDI
Sbjct: 205  EGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQYPFSSNQAIPPMDWEEYVSEICSDI 264

Query: 902  MKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRM 1081
            M+EQSPKRLFQVRGK+YELL NCIPP                      VCHWAAYYEHRM
Sbjct: 265  MREQSPKRLFQVRGKLYELLINCIPP-EIILKLLSELLKKLDEELKHEVCHWAAYYEHRM 323

Query: 1082 RLGQKAIFHIEAFVAKFMSIYKGFLIATF 1168
            R+GQKAIFH+EAFVAKFMSIYK FLIATF
Sbjct: 324  RMGQKAIFHLEAFVAKFMSIYKAFLIATF 352



 Score =  164 bits (416), Expect = 3e-38
 Identities = 76/89 (85%), Positives = 85/89 (95%)
 Frame = +3

Query: 117 MLWVDKYRPKALDKVIVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 296
           MLWVDKYRPK LD+VIVH+++A+NLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQ+FG
Sbjct: 1   MLWVDKYRPKTLDQVIVHQEIAENLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG 60

Query: 297 ASVEKVKVENKTWKVDAGTRTIDLELTTL 383
            S EKVKVEN+TWK+DAG+RTIDLELTTL
Sbjct: 61  TSAEKVKVENRTWKIDAGSRTIDLELTTL 89


>ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 354

 Score =  333 bits (854), Expect = 5e-89
 Identities = 165/209 (78%), Positives = 175/209 (83%)
 Frame = +2

Query: 542  EAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAPKEEEIAKVLEFIAKK 721
            EAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSRCLNVRINAP EE+I +VLEFI KK
Sbjct: 145  EAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVQVLEFIGKK 204

Query: 722  EGLQLPSGFTSRIAEKSNRSLRRAVLSFETCRVQQYPFTNNQLIPPMDWEVYVSEIASDI 901
            EGLQLP GF +RIAEKSNR+LRRA+LSFETCRV QYPFTN Q IPPMDWE Y+SEIASDI
Sbjct: 205  EGLQLPPGFAARIAEKSNRNLRRAILSFETCRVLQYPFTNKQAIPPMDWEEYISEIASDI 264

Query: 902  MKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRM 1081
            MKEQSPKRLFQVRGK+YELL NCIPP                      VCHWAAYYE+RM
Sbjct: 265  MKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEYRM 324

Query: 1082 RLGQKAIFHIEAFVAKFMSIYKGFLIATF 1168
            RLGQKAIFHIEAFVAKFMSIYK FLIATF
Sbjct: 325  RLGQKAIFHIEAFVAKFMSIYKSFLIATF 353



 Score =  156 bits (395), Expect = 8e-36
 Identities = 73/89 (82%), Positives = 81/89 (91%)
 Frame = +3

Query: 117 MLWVDKYRPKALDKVIVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 296
           MLWVDKYRPK LD+V+VH D+A NLKKLVTEQD PHLLFYGP GSGKKTLIMALLRQMFG
Sbjct: 1   MLWVDKYRPKTLDQVMVHTDIAHNLKKLVTEQDSPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 297 ASVEKVKVENKTWKVDAGTRTIDLELTTL 383
              EKVKVEN+TWK+DAG+R++DLELTTL
Sbjct: 61  PGAEKVKVENRTWKIDAGSRSLDLELTTL 89


>ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max]
            gi|255645652|gb|ACU23320.1| unknown [Glycine max]
          Length = 354

 Score =  333 bits (854), Expect = 5e-89
 Identities = 164/209 (78%), Positives = 175/209 (83%)
 Frame = +2

Query: 542  EAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAPKEEEIAKVLEFIAKK 721
            EAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSRCLNVRINAP EE+I +VLEFI KK
Sbjct: 145  EAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLEFIGKK 204

Query: 722  EGLQLPSGFTSRIAEKSNRSLRRAVLSFETCRVQQYPFTNNQLIPPMDWEVYVSEIASDI 901
            EGLQLP GF +RI EKSNR+LRRA+LSFETCRVQQYPFTN Q IPPMDWE Y+SEIASDI
Sbjct: 205  EGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQYPFTNKQTIPPMDWEEYISEIASDI 264

Query: 902  MKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRM 1081
            MKEQSPKRLFQVRGK+YELL NCIPP                      VCHWAAYYE+RM
Sbjct: 265  MKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEYRM 324

Query: 1082 RLGQKAIFHIEAFVAKFMSIYKGFLIATF 1168
            RLGQKAIFHIEAFVAKFMSIYK FLI+TF
Sbjct: 325  RLGQKAIFHIEAFVAKFMSIYKSFLISTF 353



 Score =  160 bits (404), Expect = 8e-37
 Identities = 74/89 (83%), Positives = 83/89 (93%)
 Frame = +3

Query: 117 MLWVDKYRPKALDKVIVHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 296
           MLWVDKYRPK LD+V+VH D+A+NLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQMFG
Sbjct: 1   MLWVDKYRPKTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 297 ASVEKVKVENKTWKVDAGTRTIDLELTTL 383
              EKVKV+N+TWKVDAG+R++DLELTTL
Sbjct: 61  PGAEKVKVDNRTWKVDAGSRSLDLELTTL 89


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